Xenopus tropicalis (tropical clawed frog): 100158553
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Entry
100158553 CDS
T01011
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100158553 (dhx34)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100158553 (dhx34)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100158553 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
HA2_C
OB_NTP_bind
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
Stevor
ResIII
Motif
Other DBs
NCBI-GeneID:
100158553
NCBI-ProteinID:
NP_001121459
Xenbase:
XB-GENE-1009178
UniProt:
B2GUC5
LinkDB
All DBs
Position
8:complement(76855579..76885146)
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AA seq
1133 aa
AA seq
DB search
MDGDRESQRWNWDCPNTRRQLEELFFSEQGYIKANSEDSKEFWVFFDRFQRFQKMQKRGD
KCKGRTDKEKYSGSLKDLPKVYDPRYRINFSIIQSKDVEKSRHNHVKEYRSRDCRSIPRE
KLEEFKMSVLHYLDFTQKQSFAKLVKLRKERSSLPIFQYKEKIISMVHKHQVVVVAGDTG
CGKSTQVPQYLLAAGFGHIACTQPRRIACISLAKRVGFESLNQYGSKVGYQIRFESSRSP
ATKIVFITEGLLLRQIQRDSTLPQYQVIIVDEVHERHLHSDFLLGVLRQLLILRPDLKVI
LMSATINIKLFSGYFEQAPVLQVPGRLFPIQVIYQPIPQEETVSKSEKLDPRPYLHVLQA
IDHKYPPDERGDLLIFLSGVTEISSVQEAVQVYATHTQRWIVLPLHSTLSIADQDKVFDL
APVGVRKCIISTNIAETSVTIDGVRFVLDSGKVKEMSFDPKAKMQRLQEFWISRASAEQR
KGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDSLVLQMKSMELGNPRHFPFIEQ
PSMSSIETAIFYLRDQGALDINEELTPIGKLLAKLPVDVVIGKMLILGSLFSLVEPVLTI
ASALSVQSPILRNSTSNPEWGTARKPLESEHGDPFTLLNIFNEWVQVKANQRSNSRKWCR
RRGLEEQRLYEMANLRRQFKELLKDHGLLEENVAQRGDRNSRQRQHKERKELHQLKRQHE
RVEKRKRKVLKLQDEGAGSSSDGEEQYHTEKHRKDRKDSIDIQDVKFKLRHNIHELHASS
STGQDLSSQEVSLLKLIVCHGLYPQLGVPDSFNSCRKDSDQVFHTKNKQGVVLHPTCVFS
CNPELLQVNSEEESAGNESGNKGQSSRHQIVAFVSLLETNKPYLVNCVRLSALQGFLLLA
RCIDTSADCCRIVCDKWMEMNVDNPESALCLITEAVQLRVALEKLLKSRLEKPSRREDHT
EDDAWTARQEAERLGRRLVDYVRPEAIYSMRRLAALEAQNLYVGPQVLSSASGLPGVFTG
VELKPDPLKGGYSVTNFLTYNCLASETDFYSDCLRSFWTCPHCGLYMPFTPMERMSHQNS
CMVEETSEGLGEQDNKMTSVTSLHRNYHCDICQKDLMLTPTEILKHKRQHLNS
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggatggagacagagaaagccagcgctggaactgggattgccctaatactaggcgacag
ctggaggaactgttttttagtgagcaaggatacatcaaggcaaattctgaagacagcaag
gagttttgggtgttttttgaccgctttcagagattccagaagatgcagaagagaggtgat
aaatgcaaagggagaacagacaaggaaaaatatagtggtagtttaaaggacctgcctaaa
gtgtatgaccccaggtaccgtattaacttttccatcatccaaagtaaggatgtggagaaa
tctagacataaccatgtaaaagaatatagatctagagactgtagatcaataccaagggag
aagttagaggagtttaagatgtctgttctgcactatttggacttcacccagaaacaaagc
tttgcaaaacttgtcaagcttcgcaaggagagatcaagcttgcccatatttcagtacaag
gagaagataattagtatggtgcataaacatcaggtggtggtggtagccggggatactgga
tgtggaaagtctactcaagtaccacagtacctgttggcagcagggtttggacatattgct
tgcactcagccacgccgaattgcctgtatttcattagccaagcgagttggatttgagagc
ctcaatcagtatggttcaaaggttgggtaccaaatccgatttgagagcagccgatcacct
gctacaaaaattgtgttcataactgagggcctcttgctacgtcaaatccaaagggactcc
acgcttcctcaatatcaagtaattattgtggatgaggttcatgaaagacatctacatagt
gactttcttctcggtgtgctacgccagcttcttattttgcgtccagaccttaaagtcata
cttatgtctgccaccatcaacatcaaattattctctggatactttgaacaggcaccagta
cttcaggtccctgggagactctttccaattcaggtaatataccaaccaattcctcaggag
gaaacagtgtcaaagtcagagaaactggatcctcgaccatacctccatgtgctgcaggcc
attgatcacaaatacccaccagatgagcgtggtgatctgttaatattcttgagtggagtg
actgaaatcagcagtgtccaagaagcagtgcaggtgtatgccacccacactcagcgctgg
attgtgcttccgttacacagcacattatcaattgcagatcaagacaaggtttttgacttg
gctcctgtaggtgtcagaaaatgtattatctcaactaacattgctgagacatcagtcaca
atcgatggagtaagatttgtacttgattcaggtaaagtaaaggagatgagttttgacccg
aaagctaagatgcagcgtctgcaggagttctggatcagccgtgcaagtgcagagcaaagg
aaaggccgcgcgggtaggacagggccaggggtgtgttatcgactgtatgcagagtcagat
tatgatgccttttctccataccctgtccccgaaatccagcgagtggcactggattccttg
gttcttcagatgaaaagcatggagctgggtaatcctcgacacttcccctttatcgagcag
ccctccatgtctagcattgagacagctattttctatcttcgagaccaaggggcactagac
ataaatgaagaacttacgcccattgggaaactgcttgccaaactgcctgttgatgttgtt
ataggaaaaatgctgatcttaggctcacttttcagcctagtggaaccagttctgaccatt
gcttctgctctaagcgtgcagtctcctatcctgcgaaactcaacaagcaacccagagtgg
ggcactgccagaaagcctctggagagtgagcatggggatccctttacactgctcaatatt
tttaacgagtgggtccaggttaaggcaaatcagagaagtaactcaaggaagtggtgtaga
cgccgggggctagaagaacaaaggttatatgaaatggcgaacctccgtcgacagttcaag
gaacttttgaaggaccatgggctactggaagagaatgtagctcaaagaggagatcgaaac
agtcgccaacgacagcataaggagcgcaaagagctacaccagctcaaaagacagcatgaa
cgggtggaaaaacgaaagcgtaaagtgttaaagctacaggatgagggtgctgggtcctct
agtgatggagaagaacagtaccacactgaaaaacatagaaaggacagaaaagacagcata
gatattcaggatgtaaaattcaagttaaggcacaacatccatgaattgcatgcatcttcc
agtacgggccaagatctctccagccaggaggtatcgttactgaaactgattgtgtgccat
ggtttgtacccacagctaggggtgcctgatagcttcaacagttgtcgaaaggattctgat
caggtttttcatacaaaaaataaacagggagtcgttttgcatccaacttgtgtcttctcc
tgcaatcctgaacttctgcaagtaaacagtgaagaggagtctgctgggaatgagtcagga
aacaaaggtcagagcagcaggcaccagattgtggcgtttgtctcgctcctggagacaaac
aagccttacttggtaaactgtgtgagactgtcagctctccagggttttctactgctggcc
cgatgcattgacaccagtgcagactgctgccgcattgtatgtgataagtggatggagatg
aacgtggacaatcctgaaagtgctttgtgtttgatcacagaagcagtgcagttaagggta
gctttagagaaacttctcaaatccagactggagaagccttctagaagagaggaccataca
gaagacgatgcttggacagcaaggcaagaggcagaacgattaggcagacgtttggtggat
tatgtgaggccagaggcgatttacagtatgcggagattagctgccttagaagctcagaac
ctgtatgtgggacctcaagttctcagctctgcttcgggtcttccaggggtgtttactggt
gtggaattgaaaccggatcctctaaaaggaggctacagcgtgaccaatttccttacatat
aactgccttgcgagcgagactgatttctacagtgattgtctgcgttctttttggacatgc
ccacattgtggtctttatatgccatttactcccatggaaagaatgagccatcagaacagc
tgcatggtggaggagacatcagaaggacttggggaacaggacaacaagatgacttcagtg
acttctttgcacagaaactatcattgtgacatatgccagaaagacttgatgttgacacca
actgaaatccttaagcacaaaaggcagcatcttaatagctaa
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