Xenopus tropicalis (tropical clawed frog): 100158566
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Entry
100158566 CDS
T01011
Symbol
ppfia1
Name
(RefSeq) liprin-alpha-1
KO
K26226
liprin-alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100158566 (ppfia1)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100158566 (ppfia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
100158566
NCBI-ProteinID:
NP_001121469
Xenbase:
XB-GENE-984553
UniProt:
B2GUD9
LinkDB
All DBs
Position
4:14490528..14555386
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AA seq
1211 aa
AA seq
DB search
MMCEVMPTISEAEMPSGGNGGHGSGSPLQADSDSHFEQLMVSMLEERDRLLDTLRETQES
LALSQSKFQEASHERDSLQRQLNTALPQEFAALTKELNICREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELAVTHKELMISREQNNQKKIFNDGTADVNHEQENALNANGKRSSD
CSINHNEDLSKVMELQDIIEKQTKEQVQMKERLAVLSNRVTELEEDLDTARKDLIKSEEM
NSKLQRDVREAMAQKDDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKESALRQS
EEKNRQIQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQME
SQLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMASLEEKNSLI
REVETAKKLIDEIQHEKDQLLLDIDTMRSETEQVRIRAASLHHSRPHLGSVPDFRFALAP
SSMSDPHSDSYSSSLVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFE
SDVDISDIEDDRETILSSVDLLSPCGQADAQTLAVMLQEQLDAINKEIRLIQEEKETTEQ
RAEEIESRVGSGSLDNLGRFRSITSIPPFTGGTSLAGSSPPGSGRSTPRRIPHSPAREVD
RLGVMTLPPGTRDDSRDDKATIRCETSPPASPRSLRLGAVHKGALHTMSHEDIRDIRNST
GSQDGQVSNPSSSNSSQDSLNKAPKKKGIKSSIGRLFGKKEKGRPGQMGKEALGPGGIPE
FENSSQESLGLSKLGGQTEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMP
AWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPATSR
TTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHR
NSFQCGIMSLRRLNYDRKELERKREECQNEIKDVLVWSNERLINWLESIGLKEYANNLLE
SGVHGALVALDETFDHNTLALLLQIPTQNTTARAMLEREFNNLLIRGTDRRFDDDDDKSF
RRAPSWRKKFRPKDVRGLSAGSAETLPANFRVNSSMSSMSSPSMQPKKMQMDGNVSGIQR
LDSATVRTYSC
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaagtgatgccaacaattagcgaggctgagatgccatccgggggcaatgga
ggccatggctccgggtctcctttacaggcagactccgattctcattttgagcagcttatg
gtgtccatgttggaggaaagagaccgactgctcgacacactgcgggaaacccaggaatct
ctagcattgagccagagcaagttccaggaagccagccatgagcgggactctctccagagg
cagctgaacacggcccttccgcaggagtttgccgcacttacaaaagagctaaatatttgc
cgagagcagcttctagagcgggaggaagaaatagctgaactaaaggctgaaagaaacaat
actaggctcttactagaacatctggagtgtctggtttcccggcacgaaaggtccctaaga
atgaccgtggtgaagaggcaggctcagtcccctgctggtgtgtccagtgaagttgaagtc
ctaaaagcactaaagtctctgtttgagcatcacaaagctttggatgaaaaggtaagagag
aggttacgggtggcattagagagatgtagcttattggaagaagaactggctgtaacacac
aaagagctgatgatttcaagagagcagaataatcagaagaaaatattcaatgacggtaca
gccgatgtcaaccacgagcaagagaacgcacttaacgctaacgggaagagatcatcagat
tgctctataaatcataatgaggacctatctaaagtgatggagctccaggatatcatagag
aaacaaaccaaggagcaagttcaaatgaaggagcgcctggctgttctttccaaccgggta
acagagctagaagaagacctcgatactgcaaggaaggacctcatcaaatccgaagaaatg
aactcaaaacttcaacgggacgtacgagaggccatggcccagaaggatgacatggaagag
agaatcaccactcttgaaaaacgctacctcgccgcacagcgtgaagccacctctgtgcac
gacctcaacgataaacttgaaaatgaaatcgctaataaggagtctgctctgagacagagt
gaagagaagaaccggcaaatccaggagcggcttgagctggcggagcagaagctgcagcag
actctgaggaaagcagaaacactgcccgaggtagaagcagaactggcacagcgagtggct
gctctttcaaaggcagaggagagacacggtaacattgaagaacgcttacgccagatggaa
tcgcagttggaagaaaaaaatcaggaactgcaaagggcccgacagagagagaaaatgaac
gaagaacacaacaaacgcctctcggatacagtagacaaacttctctcagagtccaatgaa
aggcttcagcttcatcttaaagagagaatggcttcgctggaagaaaagaactctctgatc
cgtgaagtagaaacggccaaaaagcttattgatgaaatccagcacgagaaggatcagctg
ctgctggatatagacaccatgaggtcggaaacagagcaagtcaggataagggcagcttcc
cttcatcacagccggcctcaccttggcagtgtgcccgacttccgtttcgctctggctcct
tcctccatgtctgatccccattcggactcctacagctcttctctagtcctgcgtaggcct
cagaaaggccgtctggccgccttgcgggatgagccatccaaggtacagaccctcaatgag
caggattgggagagggctcagcaggcgagcgttcttgccaacgttgcacaagcatttgag
agcgatgtagacatttctgacatagaagatgacagagagaccatattgagttcagtggat
ctgctgtcgccctgcggccaggccgacgcacagacccttgctgtcatgctccaagagcag
ctggatgctatcaataaagaaatccgattaatacaggaagagaaggagaccacagagcag
cgagcagaggagattgaatcccgggttgggagtgggagcctagataatttgggccgtttc
aggtccatcacttcaattcccccttttactggtggtacttctcttgccggatcctctcct
cctggcagtggtcgctcaactccaagaagaataccccatagtccagcccgggaagtggat
aggctgggtgtcatgacactgcctccaggtacgagagatgacagtcgggacgacaaggcc
acaatcagatgtgaaacctccccacccgcctcccccagatctttgcgtttgggcgcagtg
cataaaggagccctgcacactatgagccatgaagacattcgggatattagaaattccaca
ggctcacaggatggccaggtgagcaaccccagcagcagtaacagtagccaggactccctg
aacaaagcacctaagaagaaggggatcaagtcatccatcggccgcctctttgggaaaaaa
gaaaagggccgtccagggcaaatgggaaaagaggcacttggaccaggtggcattccagag
tttgagaactcttcgcaggaatcccttgggctcagcaagctgggagggcagaccgagaag
aaccggaagctacagaagaagcatgaacttctggaggaagctcgcaggcagggcttgcca
tttgcgcagtgggatgggcccacagtggtggtctggctagagctatgggttgggatgccc
gcctggtacgtggccgcttgcagggctaatgtgaaaagtggtgcaataatgtccgctctg
tctgataccgagatccagagggagatcggcattagcaaccccttgcaccggctcaaactg
cgactcgccatccaagagatcatgtctttaaccagcccgtctgcccctgccacttctaga
acgacgttggcctatggcgacatgaaccacgagtggattgggaacgagtggctgcccagc
ttggggctgcctcagtaccgcagctatttcatggagtgccttgtcgatgccagaatgctg
gatcacttgactaagaaggatctcagggggcagctaaagatggtggatagctttcacagg
aacagtttccagtgcgggatcatgtccttgcggaggttaaactacgaccggaaggagctt
gaaaggaaacgagaggaatgccagaacgagataaaagatgtgctcgtctggagcaacgaa
cggctgattaattggctggagtccattggcctgaaagaatatgcaaataaccttctagaa
agtggggttcacggtgctctggttgccttagatgagaccttcgaccacaatacgttggct
ttgttattacagatccccacccagaacactacggcacgtgcaatgttggagcgggaattc
aacaaccttctcatcagaggaacagatagaagatttgacgatgatgatgataaaagcttt
agacgagcgccatcatggagaaagaaattccgaccaaaggacgttcgagggttaagcgcc
ggctctgcagagactctccctgccaacttcagggtcaactcctccatgtcctccatgtcc
tccccttctatgcagccaaagaaaatgcagatggatggcaatgtgtctgggatacaaaga
ctggattccgccacggtcaggacatattcctgctaa
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