Xenopus tropicalis (tropical clawed frog): 100158627
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Entry
100158627 CDS
T01011
Symbol
hdac7
Name
(RefSeq) histone deacetylase 7 isoform X1
KO
K11408
histone deacetylase 7 [EC:
3.5.1.98
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100158627 (hdac7)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100158627 (hdac7)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100158627 (hdac7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100158627
NCBI-ProteinID:
XP_002935701
Xenbase:
XB-GENE-488662
UniProt:
A0A6I8RUJ2
LinkDB
All DBs
Position
2:144067977..144257892
Genome browser
AA seq
977 aa
AA seq
DB search
MPGLHQMLNTIYEADSASSTDGIRRGESGLRFGHKSGATGAVDLSAPVSTILTQANPMAF
QIVHRIGHHTEPTLLPIKQTQPQLYSSLSQHQPVEHPLRREAPCRNAELVRQEPSLRQLV
NKDKGKASAMASPAVKQKIVEMIQKKKFDQNNIANHSTAAAPYRSPEIVEKEPPPPPIMT
NFASQVSSNSCNPSEHFPLRRTASEPNLKWPCRPKKSGERRKNPLTRKESAPPAVRRRPP
ETQDSSPSSSSTPVSGCSSPNDSIPAENGSLSSIPGAASEGEVSRRAVPGVVHRGPYLTT
HPIFMAPGIEGHDGTNPLATRLQPVIILEQSGAHTPLVAVQGLGSVQFAHAFISPDHHKP
LSRTRSEPLPQNPKTLQQQLLYQQQYSIFPEHMKQQRQLSKRSQKTSERPRLSQIPSEEM
DESSSPTADRPNDVGGNPARARSESLRVGQHETLSSSQQAIQQQQQQHSFHQQAYLYESS
LHRPVNRPLDVLTIPLMPGGHRPLSRAKSSPASASLPAQEPSAKAMSIPMLEQATKPRFT
TGIVYDSVMLKHQCTCGDNSNHPEHAGRIQSIWSRLQERGLRNNCECIRGRKATLEELQS
VHTETHVLLYGTNPLNRLKLDNRKLAGILSQRMFVMLPCGGLGVDSDTIWNELHSSNAAR
WAAGSVIDLAFKVASRELKNGFALVRPPGHHADPSTAMGFCFFNSVAIAAKQLQLRRDVR
KILIVDWDVHHGNGTQRVFYTDPNVLYISLHRHDDGNFFPGSGAADEVGAGNGEGFNVNV
AWTGGLDPPMGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAAEGHPAPLGGYKVTAKC
FGHMTRQLMSLAGGRVVLALEGGHDLTSICDASEACVSALLGNELDPLPEETLRQRPNQN
AVCSLETVIHVQSKYWTSVKQFASKVQYTLLEAQKHDRDEVDTVTALASLSVGRGSIAVA
GNRPQEEPMEEDEPMSL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattacatcaaatgctaaacaccatttacgaggctgattccgcttcttccaca
gatggcatcagacggggcgagtcggggctgaggtttggccacaagagcggtgctactgga
gcagtggatttgagcgccccagtcagcacaattttgactcaggccaatcccatggcattc
cagattgtccatcgcattggtcatcacactgagccaacactcttgcccatcaagcagacc
cagccacagctctactcaagcctctcccagcaccagcctgtggaacatccattgcggcgg
gaggcaccctgccggaatgcagagcttgtgcgacaggaaccaagtttacggcagcttgtg
aacaaggataaaggaaaagcaagtgccatggccagccctgcagtaaagcagaaaattgta
gagatgatccagaaaaagaaatttgatcaaaacaatattgcgaatcacagcaccgctgct
gcgccttacaggtctcctgaaattgttgagaaagaacccccaccacctcctatcatgact
aactttgcttctcaggtctctagcaactcctgtaacccctctgagcacttccccctacgc
aggacagcctccgagccaaacctcaaatggccctgcagacccaagaagtctggagagcgg
aggaaaaacccccttacccgaaaggaaagtgctccacctgctgtcagaaggagaccccca
gagacacaggactcgtcaccaagcagtagcagtaccccagtgtcaggatgcagttctcca
aatgatagtatccctgcagaaaacggaagcctttcctccatccctggagctgcctctgag
ggagaagtcagtcgaagagcagtaccaggtgtggttcatcgtggcccctatctaacaaca
caccctatcttcatggcacctggcatagagggtcatgatggcaccaacccccttgccaca
cgcttgcagccagtcatcattctggaacagtcaggggcacacactcctctggtagcagtt
caaggcctgggctccgttcagtttgcacatgcttttataagccctgatcaccataagcct
ttgagccggacccgctcagaacctcttcctcaaaacccgaaaacactccaacagcagctg
ctgtatcagcagcagtactccatattccctgaacatatgaagcagcagcgccagttaagt
aagcgctcacagaaaaccagtgagaggccacgcttgtcccagatcccatcagaggaaatg
gatgagagttctagtcccacagctgaccgccccaatgatgtgggaggaaatcctgcccga
gcgaggtcagaatcactgcgagttgggcaacatgagactctcagcagcagccaacaagca
attcagcagcaacagcaacagcactccttccatcagcaggcctatttatatgaatccagc
ctccacagacctgtgaatcggccactcgatgtgctaacgatccccttgatgccaggtggg
catcggcctctttcccgagcaaagtcctctccagcctccgcatctctgccagctcaagag
ccttctgccaaagcaatgtcaattcctatgctggaacaagctaccaagcctcgcttcact
acaggaattgtgtatgactcagtaatgctgaaacaccagtgtacttgtggggacaacagc
aatcatccagagcatgctgggagaatccagagcatctggtcccgcttacaagagagagga
ttacgcaataattgtgaatgcatccggggaaggaaggctacattagaggagctgcagtct
gtgcacacagagacccatgtcctgctctatggaactaatcccctcaacagactcaaactg
gataaccgcaagcttgcaggaattctgtcccagaggatgtttgtaatgctgccatgtgga
gggcttggggtggacagtgacaccatctggaatgaactccactcctctaatgcagcccgc
tgggcagcaggcagtgtcattgacctggcatttaaagttgccagccgagagctgaagaac
ggctttgcattagtcagacccccaggacatcatgcagacccctcaacagccatgggcttc
tgcttctttaactcagtggccattgcagcaaaacaactgcaactaagacgtgatgtaaga
aagatcctcattgtagactgggatgtacaccatggaaacgggacacaacgagtattttac
acagaccccaacgtgctgtatatctcattgcatcgacatgatgatggcaactttttcccg
ggcagtggagcagctgatgaggttggtgcaggcaatggcgaaggctttaatgtcaatgtt
gcatggacgggtggtttggatcccccaatgggggacgtggaatacctgacagcctttcgg
acggtggtaatgccaatagcccatgagttctctccagatgttgtcttggtttctgctggg
tttgatgcagctgaagggcatcctgctcctcttggaggatataaagtcacagcaaaatgc
ttcgggcacatgacacggcagcttatgagcttagcaggaggccgagtggtgcttgctctg
gagggtggccatgatctcacatctatatgtgatgcttcagaggcctgtgtctctgccctg
ctgggaaatgagctggatcccctccctgaagagacgttaaggcagaggcccaaccaaaat
gctgtgtgttctttggaaaccgtcatacatgtccaaagtaaatactggacatcggtcaaa
cagtttgcttccaaggttcaatacacccttctggaagcccagaaacatgatcgggacgaa
gtggacacagtgacagctttagcctccttgtcagttggaaggggatctattgcagtagct
gggaacaggcctcaggaagagccaatggaggaagatgaacccatgagtttatga
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