Xenopus tropicalis (tropical clawed frog): 100170181
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Entry
100170181 CDS
T01011
Symbol
pou5f3.2
Name
(RefSeq) POU class 5 homeobox 3, gene 2
KO
K09367
POU domain transcription factor, class 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100170181 (pou5f3.2)
03021 Transcription machinery [BR:
xtr03021
]
100170181 (pou5f3.2)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100170181 (pou5f3.2)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
100170181 (pou5f3.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100170181
NCBI-ProteinID:
NP_001123406
Xenbase:
XB-GENE-919841
UniProt:
B3DM25
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Position
8:complement(3286063..3291320)
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AA seq
459 aa
AA seq
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MYSQQPFPPFAFNAGLIQDPANCHFGGYTGLGHPQPFSFAFSTLKSENGDSGVQGMGDCS
APVMPWNSMASFDHHGQVETNQQGNPIRAPSPTPTLSDSRIKVKEEVAHETDSGEESPEP
KYPSPPNPSLYYPNTWTGSPFWQVNPTAGNNSNSTNPMPSQTLVKNGSLPGNTTYPTPAN
QSPNTPVDCVVSSMESSRCSSANSSNGAINERATTIPNGGMVDGGQSSDNEEEVPSESEM
EQFAKDLKHKRVSMGYTQADVGYALGVLYGKMFSQTTICRFESLQLSFKNMCQLKPFLER
WLVEAENNDNLQELINREQVIAQTRKRKRRTNIENIVKGTLESYFMKCSKPGAQEMVQIA
KELNMDKDVVRVWFCNRRQKGKRQGMPTVDENDGEGYDVGQTMASPPVGHYSLPQVVTSQ
GYMAAPLGSTPPLYASAFHKNELFPQPLPHAMPMGGHIG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtacagccaacagcccttccccccctttgccttcaacgccggactcattcaggacccc
gctaattgccattttgggggttacaccggcttaggacacccccaacctttctccttcgcc
ttctctacgctgaaatcggaaaatggagactccggggttcaggggatgggcgactgctcg
gcccccgttatgccctggaactcaatggcatcgttcgaccaccacggccaagtggagacc
aaccaacaagggaatccgatcagagcgccgagtccgaccccgactcttagtgactccagg
attaaggtgaaagaggaggttgcccacgaaacggacagcggggaagagtccccagaaccc
aaataccccagcccccccaacccctctctctactaccccaacacatggactggtagccct
ttctggcaagtcaaccccacagcgggcaacaacagcaactccaccaacccgatgcccagc
cagactcttgtgaagaacggcagcctccctggcaacactacttaccccaccccagccaac
caaagccccaatacccccgtagactgtgtggtctccagtatggagagcagccggtgcagt
agcgccaactcttccaatggggcaattaatgaacgggccactacgatccccaatgggggg
atggttgatgggggacaatcgagcgacaatgaggaggaagttcccagcgaatcagaaatg
gagcagttcgccaaagatctgaagcacaagcgggtgtctatgggctacacacaggccgac
gtgggctacgcgctgggggtcctatacggcaagatgttcagtcagactacgatctgtcgc
ttcgagtcgctgcaactcagcttcaagaatatgtgtcaactcaaacccttcctagagcgc
tggttggtggaggcagagaacaacgacaacttgcaggagttgattaatcgggagcaggtc
atcgcccaaacgcggaagcggaaaaggaggacaaacatagagaatatagtgaaggggacg
ctggaaagttacttcatgaaatgttccaagccgggggctcaggagatggtgcaaatagcc
aaggagctcaatatggacaaagatgtggtccgggtctggttctgcaaccggcggcagaag
ggcaagcgccaagggatgcccacggttgacgagaacgacggcgaaggctacgacgtgggg
caaacgatggcgtcgccccctgttggacactattcgctgccgcaggtggtgacctcgcag
ggctacatggcagctccgctcggctccaccccgcccctctacgcctcggccttccacaag
aacgagctgttcccccagccgctgccccacgctatgcccatgggcggccatattggttga
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