Xenopus tropicalis (tropical clawed frog): 100170189
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Entry
100170189 CDS
T01011
Symbol
neo1
Name
(RefSeq) neogenin
KO
K06766
neogenin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04350
TGF-beta signaling pathway
xtr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100170189 (neo1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100170189 (neo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100170189 (neo1)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
DCC/UNC5 family
100170189 (neo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
C2-set_2
Ig_5
NDNF
Tissue_fac
C2-set_3
fn3_4
Ig_4
C1-set
Sp38
fn3_2
SusE
Izumo-Ig
V-set_CD47
Ig_6
FAM176
EphA2_TM
Herpes_UL74
Motif
Other DBs
NCBI-GeneID:
100170189
NCBI-ProteinID:
NP_001361493
Xenbase:
XB-GENE-922578
UniProt:
A0A8J0QI24
LinkDB
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Position
3:92275896..92363467
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AA seq
1435 aa
AA seq
DB search
MAIRSPPGSLVRVTRGLFAVSILFSVWKKPTWAAKTAGSGFRTFTPFYFLTEPVDTVTLR
GFAAVLNCSAYADPTPKIEWKKDGTFLNLVSDDRRRLLPDGSLLITSVVHSKHNKPDEGI
YQCVATVESLGSIVSRTARLSVAGLPRFTSQPESSSVYVGDSIVLNCDVSPELVPFVHWE
QNKASRELDNRVAVLLNGSLVISNANESDAGLYRCAVGGGSSIKYSEEAEIRVLQDTGDE
RPMLFLRQPLPLTRVSGQTALLTCVVSGYPTPSVRWTHNQKEILTENSETLTFVAGGSLQ
ISSVTEEDSGIYTCIADNGNQTIQAHAELSIQVPPIFHVKPSNTHAHESMDIVFKCEVTG
KPTPTVKWVKNGDMVIPSDYFKIVEDHDLQVLGLVRSDEGFYQCIAENEVGNVQAAAQLI
ILEPGVTIPTSPTPSLTRATAHNVAATPGGPLPSSPRDVVASLVSTRFIKLTWRMPADPH
GENLTYQVYYSKESMNRERVENTSRPGEMQVTIQNLLPETVYYFRVVAQNQNGAGESSLP
LKVETQPEVQVPGPAPNFKATPVSPTSVSVSWETPLSGNGEIQSYKLYYMEKGADNEQDV
DVGGHSYTLNGLKKYTEYTFRVVAFNKHGPGVSTQDVTVRTLSDVPSAAPQNLTLEVRSS
QSILVQWQPPPIGSQNGQIVGYKVRYRKTTRKSETSEILVDAQLSYLFTALERDTEYSFR
AVALTVNGSGPASDWVSAETFESDLDESRVPDVPSSLHVRPLVTNIVVSWTPPENQHQVV
VRGYAIGYGLGSPHAQTVRVDHKQRYYTIDNLEPSSHYVISLRAFNNVGEGIPLYESAVT
RQHTVPEPSPMLPPVGVQATIVASDTVRLTWADNSLPKNQKITDSRYYTVRWKTNIPANT
KYKMANSTTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFESVPSSPPKDVTV
VSKEGKPRTIIVNWQPPSEANGKITGYIIYYSTDAQAELHDWVIEPVIGNRLTHQIQELT
LDTPYYFKIQARNSKGMGPMSEAVLFRTPKESSPYMPNDQASSISGKGVRPSDPGSNGGS
SLGGSNSHHGNPTSLDQNMLLTIIVSIGVITVLIAVVIAAICSRRSSSHHKKKRAASKSV
NGSHKYKGNSKDVKPPDLWIHHERLELKPTDKSPETNPILTDTPLPRSPQDLTPGDSTTE
SSIHQHSNSYRGLESEDSVSSLAGRRGMRPKIMMPFDSQPPQPVVSAHPIHSHDNSHHFR
SVPGFMLHVLGGPPQAAESVRHTPSCDTVVAASSSSQTGPEDPDPSGVSFLPGSLDEDSV
PSVPTAHIRPSHPLKSFAVPAVPTSASGASYEPSLPSSPLLQQQCPTALSVKTASLGTLG
RVRPPLPVTVPSAPEPLETSRMLEGSECSYEPDELSKEMAHLEGLMKDLNAITTA
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccgaagccccccgggttcgcttgttcgggtcacccgggggctgttcgccgtc
tccatccttttttccgtgtggaagaagccgacttgggctgccaagactgcaggctcagga
ttcagaacctttacacccttttatttcctgacggagccagtggacacagtgactttgcgg
ggttttgctgcagtactaaactgctctgcttatgcggatccaacgccgaagattgaatgg
aaaaaggatgggacatttttgaatcttgtgtctgatgatcgccgcaggctcttaccagat
gggtcattgcttataacaagtgtcgtgcactcaaagcacaacaagccagatgaaggcatc
taccagtgtgtggccactgtagaaagtctgggaagcatagtcagccgcactgcccgactc
tctgttgcaggtctccctcgatttactagccagccagagtcctcttctgtatatgttggg
gatagcattgtattgaactgtgatgtcagtcctgaactggtgccttttgtgcattgggag
caaaacaaggcttcacgagaattggacaacagagtagctgtcctgttaaatggcagcttg
gtcattagcaatgccaatgaaagtgatgctgggctataccgctgtgcagtaggtggtggg
tcatccattaaatacagtgaggaggcagagattagagtacttcaagacacaggagacgag
cgccccatgctgtttcttcgccagcctttgccacttaccagagtttctgggcagactgca
ctcttgacttgtgtggtatctgggtatccaacacccagtgtgcgctggactcataaccag
aaagaaatactgactgaaaactcagagacgttaacattcgtggcagggggcagcctgcag
atcagttctgtaacggaagaagattctggaatttacacatgcattgccgacaatgggaac
cagactattcaggctcatgctgagcttagcatacaagtaccgcctattttccatgtcaag
ccatccaatactcatgcacacgagtccatggacattgtatttaagtgtgaggtaaccggg
aaaccgacacccacagttaaatgggttaaaaatggagatatggtgattccaagtgactac
ttcaaaatagtggaggaccatgacctgcaggtgcttggtctggtgcgctcagatgaggga
ttctatcagtgtatagctgaaaatgaggtgggaaacgtccaggcagcagcacagctcatt
atccttgagcctggtgttaccatcccaacctctcccaccccatcactgacccgtgccact
gctcacaatgtagctgccactccaggaggccccctgccttcatccccaagggatgtcgta
gcctctcttgtgtctacacgtttcataaagctgacttggcgtatgccggctgatccacat
ggagagaatctcacctatcaggtctactatagcaaggaaagcatgaatagggagcgagtg
gagaacacgagccgcccaggagaaatgcaagttaccatccagaaccttctacccgagaca
gtctattactttcgagtggtggctcaaaatcagaatggagcaggtgaaagctctctgcct
ctaaaggttgaaacacagcctgaagtacaagttcctggcccagcccccaactttaaagcc
acaccagtctcacccacatctgtaagtgtctcttgggaaaccccactgtctggaaatggg
gagattcagagctacaagctttattatatggaaaaaggagcagacaatgaacaggatgtt
gatgtgggtggacattcatatacattaaatggcctgaaaaaatatacagagtataccttc
agggtggtagcctttaacaagcatgggccaggtgtatccacgcaggatgtgactgtcagg
actctgtcagatgtacccagtgctgcccctcagaacctgacactagaagttcggagttca
cagagcattctagtgcagtggcagccccctcctataggttcccaaaatggacagattgtg
ggctacaaggtccgttaccgcaagacaacaagaaagagtgagactagtgagattcttgtg
gatgctcagctatcatatcttttcacagctcttgagcgggacaccgagtacagttttcgg
gctgtggccttgactgttaatggaagtggcccagcctcagactgggtttcagcagaaacc
tttgagagtgatctggatgagtcgcgtgtaccagatgtgccaagctccctccatgtacgt
cctttggtcacaaacattgtagtgagctggacccccccagaaaaccagcaccaggtggtg
gttcgtggatacgcaattggctatggcttaggaagtccacatgcccagactgtacgtgtg
gaccacaagcagcgttactataccattgataaccttgaacccagctcccactatgttatc
tcgcttagagcttttaacaatgttggagagggaattccactgtatgagagtgcagtcacc
cggcagcacacagttccagagcccagtcctatgttgcccccagttggcgtgcaagccact
atcgtggccagtgacactgtgcgtctcacatgggcggataactctctccccaagaaccag
aagatcactgattcaagatattacacagtgagatggaagaccaatattccagcaaatacc
aaatacaagatggcaaacagcacaaccttaagttacttggttactggtctgaagcccaac
actttatatgagttctcagtcatggtgaccaaaggtcgtagatcaagtacatggagtatg
acagcacatgggactacatttgaatcagtgccttcctcacctcccaaagatgtaactgtt
gtgagcaaggaaggaaaacctcgcaccattattgtcaactggcagcctccctcagaagcc
aatggtaaaataacaggttatattatatattacagtacagatgctcaggctgaactccat
gactgggtgattgagcctgtgattggaaaccgtctcacccaccagatacaagagttgact
ctagacaccccttattattttaagatccaggcaagaaattctaagggcatgggtcctatg
tcagaagctgtgcttttccgaacaccaaaggagtcatcaccttacatgcctaacgaccaa
gcatccagcatctctgggaaaggagttcgcccttctgatcctggatcaaatggtggctca
agtcttggaggcagtaatagtcaccatgggaacccaacgtcactggatcagaacatgctt
ttaacaattattgtttccattggtgtgatcactgtcttgattgctgtggtcatagcagcc
atatgttcccgccgttctagctcccaccacaaaaaaaagagagctgccagtaagtcagtg
aatgggtcgcataaatacaaaggcaactccaaggatgtgaaaccaccagacctgtggatc
catcatgaacgtttggaattgaaaccaacagacaagtccccagaaacaaatcctattttg
acagacacgcctctgccacgctccccacaagatctcacaccaggggatagcaccacggaa
agcagcatccaccagcacagcaattcgtatcgaggtctggaatcagaagattctgtgtcc
tcacttgctgggcgccgtggcatgcgacctaagataatgatgccttttgactcccagcct
ccacaaccggttgtcagtgcccatcccatccattcccacgataattctcatcattttcgc
tccgttcctgggttcatgctgcacgtgttgggtggccctccacaggctgcagaatctgtg
cgtcatacccctagctgtgacactgtagtagctgcatcatcttcctctcagactggccct
gaagatccagacccctcgggggttagtttcttgcctggctccctggatgaagattcagta
cctagtgttcccactgcacatatccgtccttctcatcccctaaaaagctttgctgttcca
gctgtgcccacctctgcttctggagcttcgtatgaaccctcattacctagctctccgctt
cttcaacaacaatgccccaccgctctgtctgtaaagacagcctctcttggaactcttggc
agggtgcgcccccctcttccagtcacagttcccagtgcccctgaaccactagagacaagc
aggatgctagagggctcagagtgtagctatgaaccggacgagttaagcaaagagatggct
caccttgaaggcctgatgaaggatctaaatgccattaccacagcatga
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