Xenopus tropicalis (tropical clawed frog): 100170196
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Entry
100170196 CDS
T01011
Symbol
prpf18
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100170196 (prpf18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100170196 (prpf18)
Spliceosome [BR:
xtr03041
]
Complex C
Other components
Step II factors
100170196 (prpf18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
DUF4020
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
100170196
NCBI-ProteinID:
XP_002932023
Xenbase:
XB-GENE-5838397
UniProt:
A0A6I8QAL6
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All DBs
Position
9:complement(25558571..25567144)
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AA seq
342 aa
AA seq
DB search
MDILKAEIARKRKQLEAKELLGGEKKYFKRSELAEKEREAYFERCGYKTQMEGEEEKPSS
SSNPVLELELAEEKLPMTLSRQEVIRRLRERAEPIRLFGETDYESFQRLRKIEILAPEVN
KGLRNDLKAALDKIDQQYLNELVAGQETTEEDTQNDLKVHEENTTIEELEALGECLGQGN
DNKDMDIINKVLKFLLGVWAKELNAREDYVKRSVHGKLASATQKQTESYLKPLFRKLRKK
NLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSK
HVAHVLNDETQRKYIQGLKRLMTVCQKYFSTDPSKCVEYNAL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggatattctgaaagcggagatagcgcggaagaggaagcaactggaggcgaaggagctg
cttgggggggaaaaaaagtactttaaacgcagcgaactcgcagaaaaagaaagggaggca
tattttgagcgatgtggctacaagacgcagatggaaggagaggaagagaagccttcctca
tcaagtaatcctgttttggaattagagctggcagaagaaaaattgcctatgactctctct
aggcaggaggtaatccggaggctgagagaaagggcagagcccatcaggctttttggagaa
acagattatgaatcctttcagcggctccgaaaaatagaaattcttgcgcctgaagtcaat
aagggtttaagaaatgacctgaaggctgccctggataagattgaccagcagtatctcaat
gaacttgtagctggccaggaaacaacagaggaggatacacagaatgacttgaaagtccat
gaagagaacaccacaattgaagagcttgaggctttgggggaatgcctaggacaagggaat
gacaacaaagatatggatatcattaacaaggttcttaagtttctattaggagtttgggcc
aaagagctcaacgctagggaagattatgtgaaacgcagtgttcatgggaaacttgcaagt
gctacacagaagcaaacagaatcttacttgaaacctttattccgaaaacttagaaaaaag
aacctgcctgctgacatcaaagaatccattacagatatcataaaattcatgttacaaagg
gagtatgtcaaggcaaacgatgcttatttgcagatggctataggcaatgctccttggcct
attggtgtcaccatggttggtatccatgctcgtactggtcgggagaagattttttccaag
catgtggcccatgtactgaatgacgaaactcagcggaaatacattcagggcttgaagagg
ttaatgacagtttgtcagaaatacttttccacggatccatccaagtgtgtggagtacaat
gcattgtga
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