Xenopus tropicalis (tropical clawed frog): 100170459
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Entry
100170459 CDS
T01011
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100170459 (ncstn)
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GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
100170459
NCBI-ProteinID:
NP_001123711
Xenbase:
XB-GENE-955077
UniProt:
B3DL59
A0A8J0QDN2
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Position
8:complement(137277982..137292991)
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AA seq
712 aa
AA seq
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MAVRTACCVRMMGEAYRGWRGLGLVVALLAVVCGGNSVERKIYIPLNSTAPCVRLLNATH
QVGCQSSKNGDTGVIHVVEQEDDLQWVLESGPHPPYMVVLEASLLRRDTMQKLKGSTRVS
GIAVTFSQTGPAAGFSPDPQCPNDGFGLYTSDHGPQFAHCNHTTWNPLGSGISYEDFQFP
IFLLREENETEVIKQCYREHNMPQNGSAPQYPLCAMQLSSFMYGVTNTVTCMRRNSLQSS
FSLSAGVCDTIIVHNVWSSLKPINTTGTVPPEEQIVVAAARADSHSFFWNLAPGADSTVS
GFVTLLAAAEALHKRNDTQDLPRNIMFVLFQGEVYDYIGSSRMVYDMEKGRFPVSLGNIH
SFVELNQVALRNDSFLWVHTDPISRTNETVNATVQEVVDSLVAASQGSNVTIQEVDRSQP
LPPASLQRFLRVRNIPGVVLTDHRTAYSNRYYHSVYDTADNIHMRYPEGLTKDEELKYVT
DTARSLAGVATVLANSLYRLAGGKSTEEIKADPNTVTQMLYGFLKMSNNSWFQSIIRDEW
RNVLEATQPQYYMTGTIKSTSREPNSPARLLLAVFANLTGAVVNLTKEECQNPDKIDDPN
KELYSYTWVQGPLDGNSTSRLPFCVRSATHSHVAESPAFELDQWDSTEYSTWTESRWKEI
KARIFLVPSHELEVITLVVGIAVLLVSLLTTYFINAKADILFTNTQDSDVAY
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccggactgcttgctgtgtgaggatgatgggagaagcctaccgggggtggagg
ggcttgggactcgtcgtggctctgctggctgttgtgtgcgggggaaattcagtggagagg
aagatctacattccgttgaacagcaccgccccctgcgtccgactgctaaatgccacccac
caggtcggctgccagtcttctaagaatggagacaccggggtgattcatgtggtggagcaa
gaggatgacctgcagtgggtgctggagagcggcccccacccgccctacatggtggtacta
gaggccagtctccttaggagggacaccatgcagaagttaaaggggagcacgcgtgtgtcc
ggcattgcagttaccttctcccaaacaggcccagctgctggattctcccccgatcctcag
tgcccaaatgatggttttggactgtacaccagtgaccatggcccccagtttgcccactgc
aaccataccacatggaacccgctcgggagtggaatttcctatgaagatttccagttcccc
atcttcctgctccgtgaagagaatgaaacagaggtcataaagcagtgctacagagagcac
aacatgccacagaatgggagcgccccgcagtaccccctctgtgccatgcagctttcctct
tttatgtacggagtcaccaacaccgtcacctgtatgcgccgtaactccctgcagtcatca
tttagcctttcagcaggagtgtgtgatacaatcattgtgcataacgtgtggagctccctg
aagcccattaacaccacaggcacagtcccaccggaggagcagatagtagtggctgccgca
agggctgacagccactccttcttttggaacctggctccgggggcagatagcactgtgtct
ggctttgttaccctactggctgcggcagaagcgctgcacaaacgcaacgacactcaggat
ttgccacggaatataatgtttgtcttgttccaaggggaagtctacgactatattggcagt
tccaggatggtgtatgatatggagaaaggccgcttccctgtgtcgctggggaacatccat
tcatttgtcgaactgaatcaggtggcgctgagaaatgactccttcctgtgggttcacact
gaccccatctcaaggactaatgagactgtgaatgctacggtgcaggaggtggtcgactcc
ctggtggctgcaagtcagggttccaatgtgaccatacaagaagttgaccgctcccagcct
ctcccacccgcctccttgcagcgcttcctcagggtgcggaacatccccggtgtcgtactt
accgaccacagaactgcttacagcaacagatactatcacagcgtctacgacacggccgac
aacatccacatgaggtatcccgaagggctgaccaaggacgaagaactgaaatatgtcacg
gatacggcacggtctcttgcaggtgttgccactgtgcttgccaactctctgtacaggctc
gctggggggaagagtacagaggaaattaaggctgaccccaatacggtcacacagatgctg
tacgggtttttaaaaatgtccaacaacagctggttccagtccatcattagggacgagtgg
agaaatgttctggaggccacccagccgcagtattatatgacgggcactataaagagtacc
tcaagggagcccaatagtcccgcccgccttctgcttgccgtgtttgccaacctcaccgga
gcggtggtcaatctgaccaaagaggaatgtcagaacccagacaagattgacgatcccaat
aaagaactgtacagttacacttgggtgcagggccctctggacggtaactccacatcaagg
ctgccattttgtgtgaggagcgccactcacagtcacgtggcagagtctccggccttcgag
ttggaccaatgggactccaccgaatactccacttggacagagagtcgctggaaggagatc
aaggcccgcattttcctagtacccagtcatgagctggaggtaatcacactggtggttggc
atcgccgtccttctcgtttctctgctcaccacgtactttatcaacgccaaggccgacatc
ttgttcacaaacactcaggacagcgacgtggcctattag
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