KEGG   Xenopus tropicalis (tropical clawed frog): 100170460
Entry
100170460         CDS       T01011                                 
Symbol
phf5a
Name
(RefSeq) PHD finger-like domain-containing protein 5A
  KO
K12834  PHD finger-like domain-containing protein 5A
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100170460 (phf5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    100170460 (phf5a)
Spliceosome [BR:xtr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100170460 (phf5a)
 Complex B
    100170460 (phf5a)
 Complex C
   U2 SnRNP specific factors
    100170460 (phf5a)
SSDB
Motif
Pfam: PHF5
Other DBs
NCBI-GeneID: 100170460
NCBI-ProteinID: NP_001123712
Xenbase: XB-GENE-976801
UniProt: B3DL60
LinkDB
Position
4:120352630..120358121
AA seq 110 aa
MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVI
CGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR
NT seq 333 nt   +upstreamnt  +downstreamnt
atggcgaagcatcatccagatttgattttttgcagaaaacaggcgggcgtggctattgga
agactctgtgaaaaatgtgatgggaagtgtgtgatttgtgactcgtatgtgcgcccgtgc
actcttgtgcgtatttgtgacgaatgtaactacggctcttaccaagggcgatgtgtgatc
tgcggagggcctggggtttcagatgcttattactgcaaagaatgcaccatccaggagaaa
gatagagatggttgtcccaaaattgtaaatttaggcagctccaaaacagatctcttttac
gaaagaaagaagtatggattcaagaagaggtga

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