Xenopus tropicalis (tropical clawed frog): 100170476
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Entry
100170476 CDS
T01011
Symbol
pls1
Name
(RefSeq) plastin-1
KO
K17275
plastin-1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100170476 (pls1)
04147 Exosome [BR:
xtr04147
]
100170476 (pls1)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
100170476 (pls1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of microglial cells
100170476 (pls1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
CAMSAP_CH
EH
DUF5580
SPARC_Ca_bdg
Motif
Other DBs
NCBI-GeneID:
100170476
NCBI-ProteinID:
NP_001123731
Xenbase:
XB-GENE-967638
UniProt:
F7DUB7
LinkDB
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Position
5:119681540..119707419
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AA seq
624 aa
AA seq
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MANKTITITRDELEDLKEAFKKVDIDNSGYVNDYELHELFREASLPLPGYQVRDIIERIF
VEADHNKDGKIDFEEFVTVMTDLKSSDISKTFRKAINKKDGITAIGGTSSNSSQGTQHSY
SEEDKFAFANWINKALQDDPDLKHLLPLNPNDKSLFTSLRDGILLCKLINMSQPDTIDER
AINKTKLTSFTISENINLALNSASAIGCTVVNIGAEDLKEAKIHLVLGLLWQIIKIGLFA
DIEISKNEALIALLKDGESLEELMKLTPEELLLRWVNYHLANAGWPSISNFSKDVKDSKA
YFYLLREIAPKEDFFIDFSGFAEKDDLKRANFMLKEADKLGCRQFVTPSDVVSGNAKLNL
AFTANLFNMYPALHNVNNHGLDLNQIEGETSEERTFRNWMNSLGINPYVNHLYSDMCDAL
VLFQLYDRTRIAVDWGRVNKPPFSALGGHMKKIENCNYAVNLGKNKGGFSLVGISGSDLH
EGNKTLTLALIWQLMRRYTLNVLSDLGGGQKIDDQNIISWVNETLAGAYKQTFIHSFKDS
SISTSLPVLDLIDAIEPKAINQEMVKRENLSDEDKMSNAKYALSIARKIGARIYALPEDL
VQVKPKMVMTVFACLMGRGLNKLK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaagacgattacaatcactagagatgaactggaagatctaaaagaggcattt
aagaaagtcgatattgacaacagtggctatgtcaatgattatgagctccatgaattgttc
agagaagccagccttccacttccgggttaccaggttcgggatattattgaaaggatcttt
gtggaggctgaccacaataaggatggcaagatagactttgaagagtttgtaacggtgatg
acagacttgaaaagcagtgacattagcaaaaccttcaggaaggctatcaacaagaaagac
ggcataactgcaattggaggaacatcttccaattccagccagggcacacagcactcatat
tccgaggaagataagtttgcatttgctaactggattaataaagctttacaagatgaccca
gaccttaaacacttactacccttaaacccaaacgataaaagcctgtttacatcactaagg
gatggcattctactttgtaaactgatcaacatgtctcagccagatactattgatgagaga
gccataaacaaaacaaaactcacatcattcaccatttcagaaaatataaaccttgccctg
aattctgcgtctgccattggctgcacagtggtcaatattggagctgaagatcttaaagaa
gcgaagatccatttagtgcttgggctgctatggcaaatcattaaaatagggctgtttgca
gacatcgaaatatccaagaatgaagctttgattgctttgcttaaggatggggagagtctg
gaggagttaatgaaactaactcctgaagagcttttgcttcggtgggttaactatcacctg
gctaatgctggctggccttcaataagcaacttcagtaaagatgttaaggattccaaggct
tacttttacttgctgagagagattgctcccaaggaagattttttcattgacttctctgga
tttgcagaaaaagatgacctaaaaagggccaatttcatgctcaaggaggctgataaactg
ggttgcaggcaatttgtgacaccatcagatgtagtttctggcaatgctaaactgaattta
gcctttactgcaaatctgtttaatatgtatcctgctctgcataatgtcaacaaccacggc
ttagacttgaatcaaatagaaggagaaaccagtgaggagaggacattccgcaactggatg
aattcattaggcatcaacccatatgtaaatcatttgtacagtgatatgtgtgatgcgctc
gttttattccagctgtatgataggactcgcatagcagttgactggggtcgtgtcaacaag
cctccattttctgctcttggtggacacatgaaaaagattgagaactgcaattatgctgtt
aatcttggcaagaacaagggtggattttccttagttggtataagtggctccgatctccat
gaaggaaacaaaacactgaccctggcattaatatggcagcttatgagaaggtacacacta
aatgtattatctgacctgggaggtggacaaaagatagatgaccaaaatatcatttcttgg
gtgaatgaaactctggctggtgcatacaagcaaactttcatccacagctttaaggattcg
tccattagcacaagccttcctgttttggatttaattgatgccattgagccaaaagccatt
aatcaggaaatggtgaaaagggagaatctttcggacgaggacaaaatgagtaatgctaag
tatgcattatccattgcccgaaagattggagcacggatctacgcgctgcctgaagatctg
gtacaagttaagccaaagatggtgatgacagtatttgcatgcctcatgggaagaggactc
aacaaattaaaataa
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