Xenopus tropicalis (tropical clawed frog): 100170499
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Entry
100170499 CDS
T01011
Symbol
greb1l
Name
(RefSeq) GREB1-like protein
KO
K27478
GREB1-like protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
100170499 (greb1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cpSF2-GREB1
GREB1_2nd
GREB1_C
GREB1_N
TAGT
Rcd1
Pox_A3L
Motif
Other DBs
NCBI-GeneID:
100170499
NCBI-ProteinID:
NP_001123751
Xenbase:
XB-GENE-5965356
UniProt:
B3DLJ0
LinkDB
All DBs
Position
6:108430259..108508153
Genome browser
AA seq
1970 aa
AA seq
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MGNSYAGQLKSARFEEALHNSIEASLRCSNVVPRPVFSQLYLNADSSTFSPEGVDVKPKV
EELDKDLVHRYTQNGSLDFSTSQPVSELEEDDEDDEMSDSNSPPLPYAQKPAPEGSCTID
GFCQAGKDLRLVTLCTEQFDVPAGFLLVGAKTPSLPDHILVCAVDKRFLPDDDGKNALLG
FSGNCVGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYYLVRNSQGVLSKGPLICWKET
RNRQYPAVIPPAKPLTSISATSILENGNCNGYKPSFPHSDLTSFTSAKVPPTVHSSTPQD
LSRNKGIVKPLALPVHIVGKTFPAAPSTIQAPEISNGTLNGGRATVLNSTPSQPAPHSTS
PSPGCVAGDHGMKTMISFSGPPKKRHRGWPPGSPVLAPMLATAAPTARPVTQTAALPQTV
LGGVFQPQPIPAGETVIVPENLLNNSGIRPVILIGYGALPYFYGNVGDLVVSPLLVNCYK
LQELEKKELDQMGVSSWQFLSVENMILLTIQYLVRLGPDQIPIREVFEQIVLKALQDLNY
KDHSLQTSPAAFHVSQAQLPWLARLSASVSQDLVHVLITQNSLAEGISETLRSLSEIKQQ
QKLPDYVVVICSSKVRGNEFCVIALGKYQSRIVAESMLTTSEFLKEISYELITGKVSFLA
SHFKSTSLGDDLDKLLEKIQHKRADHVVVPFNGDVKECVSSQEAASMTPTHGRGCDSEGF
HIYQSQLLIARKLLSQVCAIADSGSQSLDLGRFSKVDFMIVVPRSEVLVQQTICRIRLSG
VLSDLGLEETTTAHQKADKYVLRLDGEIHAKFDAFMKKVKQNPYTLFVLIHDNCHVDLTS
FTSGTLSHGEPTIGLSDRIINSQEVQEAQNLIVLQVSSFPYALQTQQSKISPCNEVHWIQ
SDTAEEVASEQKLYFGINEYSKSLQWGITSPLLRCDETFEKMVNTLLERYPRLHSMVIRC
YLLIQQYSEALMALTTMASLRDHITPETLNIMDDLLSSPAKDKSGRGHMLIIRVPSVQLA
MLAKERLQEVRDKLGLQYRFEVILGNPASELIISKHFVTRLKFWRGYDDDEDWIPRTFLD
LEGLPCIVILAGKDPFGETFPRSLKYCDLRLIDSSFLSRTALEQEVGLACCYVSREVVRE
PMTVLDLSEKEADKDNTSGNDSDELYIDLDRPQSNGSAVTGTSGSIAENGVSSSSAADDS
QRQPLAFNFQNVANSTVDEGTYPNSTASDLGKPECDSLGSQMASSTTKLSPPSSQTFKWN
DQSGREALHLALPRIVILSKATYNLLDTQKNGQAPTTISLLPHADVSWLRTLRPSISTDM
TTEDQSLYYRQWTTAKPHHADYTNSSEPNGMRSAHTRRLLLTGPPQVGKTGAYLQFLRIL
YRMLIRLLEVDVYDEQEINAVEESEIDEISPPDFSQWPDIEVFSKTQFDVTVHDPKYRHI
SPLYTERNSHGKPDSQAEMKPEEPRKRETVSMMLTKYAAYNTFHHCEQCHQYMDVSSTSQ
MPESTLHAFTFSSSMLGEEVQLHFIIPKSKEHHFVFSKQGKHLESMRLPLVTDKQNPNMV
KSPIFTPSSGRHEHGLLNLYHAMEGIGHLHIMVVKEYEMPLYRKYWSNHIMLVLPGMFNN
AGAGASRFLIKELSYHNLELERNRLEELGVKRQCVWPLIAIMDDSCVLWNLHSKVPEQMS
PSLETESLVRNVSLKNVLQHMEGTPKITNYAMLGIQKWNSKLSSSLPKRPFSRCHVHDFI
LLNVDLTQNVQYDLNRYFCEDVDFNLRVNSGGLLICRFNNFSLMKKHIQVGGHKDFIIKP
KIMITESLAPISPMQYVCAPDSEQTLLAAPAQFLLEKFLQHSSHRLFPKALNNCRNPLLA
VDCYLNLGPEVTLCYVSSRPHSVNVSCEGMAFSGLLLYLCDSFVCAGMLKKYKFLKGATL
CVICQDRSSLRQTIVRLELEDEWQFRLRDEFQTANSSDDKPLYFLTGRHI
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atggggaactcttatgctgggcagctgaaatctgcccgttttgaggaagctcttcacaat
tcaatagaagcctcccttcggtgcagcaatgttgtgccacggccagtcttctcacagctc
tacttaaatgctgacagctcgacattctcacctgaaggtgttgatgtaaagcctaaagtg
gaggagttggacaaggatttagtacaccggtacactcagaatggcagcttggatttttct
actagccaaccagtttctgaattggaggaggatgatgaggatgatgagatgtcagattca
aacagtcctcctctaccatatgcccaaaaaccagcaccagaaggatcttgcactatagat
ggtttctgccaggcaggaaaagacttgcggttggtgacactttgcacagaacagtttgac
gttccagcaggattccttttagttggagcaaagactcccagccttccagaccacattctc
gtctgcgctgttgacaaaagatttttgccagatgatgatggaaaaaatgcacttttaggg
ttctctgggaattgtgttggctgcggagagagaggtttccgatacttcacagagttctct
aaccacataaatctaaagctcacaacccagccaaaaaagcaaaagcacttaaagtattat
cttgtacgcaattcacaaggagtcttgtccaaaggtcccctcatctgctggaaagagact
cgaaatcgccaatatcctgctgtaattccaccggccaaaccactaacatctatatccgca
acctcaattttggaaaatggaaattgcaatggatacaaaccaagctttcctcattcagat
cttacatccttcacctctgccaaagtgccccctacagttcactcaagtacccctcaggat
ctttcacgaaacaagggaattgtgaaacctcttgcgctgcctgtgcatattgttggaaag
acatttcctgcagcaccttctacaattcaagctccagagatctctaatggaactttaaat
ggaggtagagcaactgtattaaattctacgccttctcagccagcccctcattcaacttct
ccaagtcccggttgtgttgctggagatcatggtatgaagacaatgatttcattttctggc
ccaccaaagaaaagacacagaggatggcctccaggatctccagtactagcgccaatgtta
gcaacagccgcaccaactgctcggccagtcacacaaactgccgctttgccacagacagtt
ttgggaggagtttttcagcctcagcctattccagctggtgaaactgtgattgttccagaa
aatctattgaataattctggcatccggcctgtcattcttataggttatggggctttgcca
tacttctatgggaatgtgggagaccttgttgttagccctttactagtgaattgctacaaa
ttgcaagaactagaaaagaaggagctggaccagatgggggtgtctagttggcagttcttg
agtgtggagaacatgattctgctaacgatacagtaccttgtgcgactaggtccagatcaa
ataccaatccgtgaagtctttgagcagattgtgctgaaagctctgcaggatttaaattat
aaagaccactccttgcaaacatcccctgcagcctttcacgtgtcacaggcccagttgcca
tggcttgcccgcctgtcggccagtgtttctcaggacttggtgcatgtgctcattacacag
aattccttggcagagggcatttccgagaccctgagatctctgtctgaaataaagcagcaa
cagaagctcccagactatgtagtagtaatttgttcgtcaaaggtgcggggcaatgaattc
tgtgtgatagcactgggcaagtaccagtctcgcattgtagcggagagcatgctgaccact
agtgagtttctgaaggaaatcagctatgaacttatcactggcaaggtcagcttcctggct
tctcatttcaagagcacatctctgggtgacgatttagacaagttactggagaagatacag
cacaaaagagcagaccatgtagtggtgccttttaacggggatgtaaaagaatgtgtctca
tctcaggaagcagcaagcatgacaccaacccatgggagaggttgtgactcagaaggcttc
cacatatatcagtctcagctgttgatagcacggaagcttttgtcccaagtgtgcgccata
gcagacagtggaagccagagccttgatttggggcgattcagcaaagttgattttatgatc
gtggttcctcgttcagaagtcttggtacagcagaccatctgcaggattagactttcaggg
gttctatcagacctgggcctagaagaaacaacaacagcacaccagaaagcagataaatat
gtgctcaggcttgatggggaaattcatgctaaattcgatgccttcatgaagaaagtgaaa
caaaacccatacacactgtttgtcctcattcacgacaattgtcatgtagatttaacaagt
tttacttctggaaccctttctcatggagagcctactattggcttgtctgatcgcatcatc
aacagccaagaagtgcaagaagcccagaaccttattgtgctccaagtcagctctttccca
tatgccttacaaacacaacagtccaaaatcagcccctgcaatgaggttcactggatccag
tctgacactgcagaggaagtagccagtgaacaaaagctttactttggaataaatgagtac
agcaaatctcttcaatgggggattaccagtcctcttctgcggtgtgacgagacatttgaa
aaaatggtcaataccctcttggaaaggtaccccaggcttcacagcatggtgatacgatgc
tacctccttatccagcagtattccgaagcactgatggcccttacaacaatggcatccctg
agagaccatatcacaccagagacactaaacatcatggatgaccttctcagctctccagca
aaagacaagagtgggagaggacacatgctcataatcagagttccttcagtgcagttagcc
atgctggcaaaggaaaggcttcaggaagtgagagacaagcttggtttgcagtatcgcttt
gaagtcatccttggaaatcctgcttcagagctcattatttctaagcactttgtgactaga
ttaaagttttggagaggatatgatgatgatgaagactggattccaagaacctttttggac
cttgaaggacttccttgcattgtaattcttgctggcaaagatccttttggagaaacattc
ccaagatctctgaaatattgtgaccttaggcttattgattcaagctttttaagtcggaca
gccttggaacaagaagtgggtttggcttgctgttacgtctctagagaggttgtaagagaa
cccatgactgttctggacctcagtgaaaaggaggcagacaaggacaataccagtggcaat
gactctgatgaactctatatcgatttggatcgaccccagagtaacggcagtgctgtgact
ggaacttcaggttccattgcagaaaatggggtcagctcatcaagtgctgcggatgattct
cagaggcagccactggccttcaacttccagaatgtggcaaacagcactgtagatgaagga
acatatccaaactccactgccagtgatcttggcaagccagagtgtgactcactgggaagc
caaatggctagtagcactactaaattatccccaccatcatcacagactttcaaatggaat
gaccaatcgggaagagaggctttgcatttagccctgcctcgtatcgtcatcctttccaag
gccacctataaccttcttgacacacaaaaaaatggccaggcacctactacaatttccctt
ttgccccatgccgatgtttcttggctgagaactttgaggccttcaatttctaccgatatg
actactgaagaccagtccttgtactacaggcaatggaccacagcaaagccacaccatgca
gattatactaactccagtgaacctaacggaatgaggtctgctcatacacgacgtctgctt
ttgactggacctccacaggtagggaaaactggtgcctacttacagttcctcagaatcctt
taccgcatgcttattcgccttctcgaagtggatgtgtatgatgagcaggaaataaatgca
gttgaggagagtgagatagacgaaatctctccgcctgactttagccaatggcctgacatt
gaagtctttagcaaaacgcaatttgacgtcactgtgcatgatccaaagtatcgacatatc
agccctctgtatacagaacgcaactcgcatgggaaaccagactcccaagcggaaatgaag
ccagaggaaccaagaaaacgtgagacggtttccatgatgttgactaaatatgcagcttac
aataccttccaccactgtgagcagtgccatcagtatatggatgtcagttctacgtcacag
atgccagaatccactttgcatgccttcactttctcttcatcgatgcttggagaagaggtc
cagcttcactttatcatccctaaatctaaagaacaccattttgtcttcagtaaacaagga
aagcacctggagagcatgcgccttcccttggtgactgataaacaaaacccaaatatggtg
aagagcccaatttttacaccttctagtggccgtcatgaacacggactgctaaatctatac
catgccatggaaggtatcggccatctgcacatcatggttgtcaaagagtatgaaatgcca
ctataccggaaatattggtccaatcacattatgctggtgctgcctgggatgtttaacaat
gctggagcaggtgcttcaagattccttattaaagagttgtcctaccataacttggagctg
gagcgcaaccgcctggaagaactaggagtcaagcgccaatgtgtttggccccttattgcc
ataatggatgattcttgtgttctgtggaatctacatagtaaggttcctgagcagatgagc
ccttctttggaaacagagagcttggttaggaatgtgtccctgaaaaacgtcttgcagcat
atggaggggacaccaaagattactaattatgccatgctggggatacagaagtggaacagc
aaactgagttcatctttgccaaagcgcccattctctaggtgccacgttcatgattttatc
cttctcaacgtagacctgacgcagaatgtccaatatgatctgaacaggtatttttgtgag
gacgttgactttaatttgagagtaaacagtgggggcctgctgatatgtcgcttcaacaac
ttcagcctcatgaagaaacacatacaggttggagggcacaaggactttattataaagcca
aaaataatgataacagaaagcttggctcccatatccccaatgcagtacgtgtgcgcccca
gacagtgaacagactctgctggctgctcctgcccaattcttgctggaaaagtttctacag
cacagttctcacagactcttcccaaaggctcttaacaactgtaggaatcccttactcgct
gtggactgttatttgaatttgggccctgaggtgactctgtgctatgtgagctccaggccg
cactcggtgaatgtcagctgtgagggaatggctttcagcggattgctgctctacttgtgc
gactcctttgtctgtgcagggatgctgaaaaaatacaaatttcttaaaggtgcaacactt
tgtgtaatctgccaagacagaagttccctccgtcagaccatcgtgcgcttggagctggag
gatgaatggcagtttcgcctacgggatgagttccagactgccaacagcagtgatgacaaa
ccactgtatttcctgacaggacgccacatctga
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