Xenopus tropicalis (tropical clawed frog): 100170546
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Entry
100170546 CDS
T01011
Symbol
tsc2
Name
(RefSeq) tuberin
KO
K07207
tuberous sclerosis 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04115
p53 signaling pathway
xtr04140
Autophagy - animal
xtr04150
mTOR signaling pathway
xtr04218
Cellular senescence
xtr04910
Insulin signaling pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100170546 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100170546 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xtr01009
]
100170546 (tsc2)
Protein phosphatases and associated proteins [BR:
xtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100170546 (tsc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
100170546
NCBI-ProteinID:
NP_001123795
Xenbase:
XB-GENE-981706
UniProt:
B3DLU6
LinkDB
All DBs
Position
9:18944517..18976769
Genome browser
AA seq
1753 aa
AA seq
DB search
MAKQMGKDPGLKEKVKMLLGLVPARVKTKPSEWKHPEYVITADLMKELSSESALHVRIRA
IIQVCELAKTKKFEEHAVEAICQSVGDLIQPEQPVEARHHVLQLLKAIIVGQQFFWCDFP
QGERLGVLRAHFFRVIKEYPMNEDLAERLEVFKALTDNGREIAYLEEELAVFVLQWMEIG
LTPDFLHVLVNLVKFNSCYLEHFIAPMVQMICLLCNRTTSPYDIEVSLKVLDAVVCYNCL
PSESIPIFVMTLCRTINVKELCEPCWKLMRNLLGTHLGHSAIYTMSRIMEDRAHMEDAPL
LRGAVFFVGMGLWGAHRLFCLKNSPISVLPSFLKAMNCNNAVVSYEIVLSVTRLIKKYGK
DVQAATWDVLLDIIERLFQQLQVLRSQELKAAVHNLMTTTEELYNQNGFHGDEERFFELV
EKGADERPFASVVNLITYRAQSIHPGKEGWIMNLQKLMDRYFRSESRSVVRMKILDVLSF
ALSINRQFYEDELIEKVVTCQLAHIPEDKDHQVRKLATQLLVDLAECCHSCHFNSLMDII
EKVVNRSLSTPESGHDSSSLEDVKTSVLGLMVILQTKLYILPASHAMRVYEMLINHIQLH
YKYNYSSPIATSIRLQVFDFLLHLRADSLRRVGLPNKDGAFRFSPYCLCESVNEQEKRAA
ERKPAGTLSPPSGSPSVPSQTVTPRMGFLPFSLAFGVILQCLKQETDWKVLKLVLNKLPE
CLRYKLLILSSPCNIDQLAGSLCAMLTDKTASDRLYITPDGFSRTDLQLAVVPVLTALTS
YHQHLELSKQREMVRCLETGLIFRCGKQCVVALSMCVIEMPSILIKSLPVLIVKLTHISA
TVTMAIPMLEFLSTLVRLPHLYANFAAEQYASVFAISLPYTNPSKFNQYIVFLAHHVIAM
WFIRCRLSLRRDFVPYITKGLRSNVLLSFDDTPEKGSFRARSTSLNERPKSRMQTSVTSS
SLSSADESSMAQADDSLKNLHLELTEICLDMMARYAFANFTAVPKRSPVGEFLLDGGRTK
TWLVGNKLITITTSVGMGTRSLLGLDTGGENHGDTENSSPVQTEQVKEFPSMLDLQQRKP
GMQTPRHRVRSMSGGTTLRAGSLEGTPLSASMGQPGATPVTRAEKPSRRTQMKKEKTTLA
DFVPVLTQGWAEVLVRRPTGNTSWLMSLENPLSPFSSDINNMPLQELSNALMAAERLKEH
RETALYKSLSVPASTLSPSTTKCTLLQRANTESCAVPEEGAQADGEAEEVSTPGGSQELE
DFEAVVSEDTTSEEKSAKKMECISRSSSTSSQEESAATQTEESEAGGIPIEGSTREVPFQ
TLSKSSSSPELQTLQELPKELGPTEDIKKPSADFKTLPHVENPLSHRTKSEEERSAGALA
KPEGEMRLEPELPVLSPQSPTGHRPRGHTISDSEPSRRGRRFQVDPFKNSTKSTKAEKVP
GIDPSFVFLQLYHSPFFGDESNKPILVPNTQTFERTMGLLDRIPPYDTHKIGVLYVGEGQ
VGNERAILSNEHGSYRYTQFLTGLGKLIELKDTQPDKIFLGGLDGCGDDGQFTYCWHDDI
MQVIFQITTLMPNKEIDPNRCNKKRHVGNNFVNIIYNDSGEFYKLGTLKGQFNFVDVNIQ
PLDCESNLVTLQCRKDMEGLVDTSVAKIVSDKNLPFLARQMALHSNMASQVHHSRSNPTD
IYPSKWIARLRHIKKMRPKIQEELQELSANMPYQVPTMANKPPSQNPQTPPGAFETGQRT
RLISAVDDFTEFA
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcagatgggtaaagatcctggcctgaaggaaaaggtgaaaatgctattggga
ttggtgcctgcacgagttaaaaccaagccttcagagtggaaacatccggaatatgtcatt
actgcagatttaatgaaggagctgagctctgagtctgctctccacgttcgcatccgtgca
attattcaggtctgtgagcttgcaaagacgaaaaaatttgaagagcatgcagtagaagca
atctgccaatcagttggtgacttgatacagcccgaacagccagtagaagctcgacatcac
gttctgcagttactaaaggccattattgtggggcagcaatttttctggtgtgactttccc
cagggtgaaagacttggcgtccttcgtgcccatttcttccgagtcataaaagagtatcct
atgaatgaggaccttgcagagcgactggaggtttttaaagctctcaccgacaatgggcga
gaaattgcttacttagaagaagagctcgctgtcttcgtcctccagtggatggaaattggt
ttgactccggatttcctgcatgttttagttaacctggttaagttcaatagctgttacttg
gaacactttattgctcctatggtgcagatgatatgcctcctctgtaatcgcacgacatct
ccttacgatattgaggtttccttgaaggttctggatgcagtggtctgctataactgcctt
ccatcagagagcattcctatatttgttatgaccctgtgccgcacaataaatgttaaggag
ctgtgtgaaccatgctggaagctgatgcgaaaccttctgggcacccatcttgggcacagc
gccatttacactatgagtcgtataatggaggatagagcccacatggaagatgcccctttg
ctaagaggagctgtgttctttgttgggatgggtctctggggagctcacagactcttctgt
ctgaagaactccccgatatctgttctcccatctttcctgaaggctatgaactgtaacaat
gccgttgtctcctatgagattgtcctctctgtcactcggctaatcaagaagtacggcaag
gatgtgcaggctgccacgtgggacgttctccttgatatcatcgagcgattattccagcag
cttcaggtgctgcggagtcaggaattaaaggctgcggtgcacaatctcatgaccaccaca
gaggagctttataaccagaacggattccatggagatgaagagagatttttcgagctggtt
gaaaaaggggcagatgaaagaccttttgcatctgttgtgaaccttatcacctacagagct
cagtccattcaccctgggaaggaagggtggattatgaatctacagaaactgatggataga
tatttcaggagcgagtctcgcagtgttgtacgcatgaaaatcttagatgttctgtccttt
gcgttgagcatcaatcgccagttttacgaggatgagttgatcgagaaggtagttacttgc
cagctagcccatatacccgaggataaggaccaccaggtgcgcaaactcgcaacacagctc
cttgtggacctggctgaatgctgtcactcctgccacttcaatagtctcatggatatcatt
gagaaggtggtgaaccgttccttgtccacaccagagtcaggtcatgattcttcttctttg
gaagatgtgaaaacctctgttctggggctgatggttattctacagaccaagctatacatt
ctgccagccagccatgccatgcgtgtgtacgagatgctgattaatcatatccagcttcac
tacaaatacaattacagctcacccattgctaccagtatacgcctccaggtttttgacttc
ctcctacacctccgagctgactctttgcggcgtgttgggctacctaacaaagatggcgcc
ttcagattcagtccctattgtctttgtgaatctgtaaatgaacaagagaagagagcagct
gaacgcaagccagcaggcaccttgtcacccccctctggtagccccagtgtcccatcacag
actgtcactccacgcatgggattcttgccattctcactagcatttggggttatcctgcag
tgcctaaagcaggaaactgactggaaagtcctgaaactagtcctcaacaagctgccagag
tgtctgcgttacaaactgctcattctgtcatctccctgcaatatagatcaactggctggc
tctctctgtgctatgcttacagacaagactgcaagtgatcgcctttacattactcccgat
ggcttctctcgtactgaccttcagctggcagtggttcctgtactgacagccttaacctca
taccaccaacacctagagctctctaaacagagggaaatggtaaggtgtctggaaacaggc
ctgatctttcgctgcggcaagcagtgcgttgtggccctttccatgtgtgtgatcgagatg
ccaagcattctgataaaatccctcccggtccttatcgtgaagctaacccatatctcggcc
actgtcaccatggccataccaatgctggagtttctttcaactttggtccgcctgccccac
ttatatgcaaactttgccgcagagcagtatgccagtgtgtttgccatctcccttccctac
accaacccatcaaagtttaatcaatacattgtattccttgcacaccatgtcattgccatg
tggttcatccggtgcagactatccctacggagagactttgtgccatatataacaaagggt
ttgcgatccaatgtcctgctgagctttgatgacacaccggagaagggcagctttagagct
cgcagcaccagcttgaacgagagacccaaaagccgtatgcagacttctgtcaccagctcc
agcttgagttcagctgatgagagctctatggcccaggctgatgacagcctgaaaaacctt
cacctggaattgaccgaaatctgcctggatatgatggcacgatacgcctttgccaacttc
acagccgtgcccaaaaggtcgcctgtaggtgagttcctgctggatggcggaagaacgaag
acctggctagttgggaacaagctgattaccattacaacaagtgtgggcatggggacacgt
tctcttcttggcctggatacaggaggggagaaccatggtgacactgagaacagctccccc
gtgcaaacagagcaagtcaaggagtttccgtccatgctcgatcttcagcaaagaaagccg
ggtatgcaaacgccccgtcacagagtccgctccatgtctggagggactacactgagagct
ggatcactagaggggactcctctttcggccagtatggggcagccgggggccactccagtg
accagagcagagaaaccttcccgtaggacacagatgaagaaagaaaagaccaccctggct
gactttgttcccgtgctgacacaaggctgggcagaggtattggttcgcagacccacaggt
aacaccagctggttgatgagcctggaaaatcctctgagccccttctcttctgacataaac
aacatgccgctgcaggagctttctaatgccctaatggcagccgagaggctcaaggagcat
cgggagacagcgctctacaaatctctctctgtgccagcttcaactttatcaccctcaaca
accaagtgtacccttctacagcgggcaaacacagaatcttgtgctgtgccagaggaaggg
gcgcaagctgatggggaagcagaggaagtgtccactcccgggggctctcaagagctggaa
gattttgaggctgtggttagcgaagacaccactagtgaagagaagagtgctaagaagatg
gagtgcattagcaggtcttcatccacatccagtcaggaagagtctgctgctacccaaacg
gaggaatccgaggctggtggaatacccattgagggctccactcgggaggtcccatttcag
actttgagcaagtccagctcatctcctgaacttcagaccttgcaggagcttcctaaagag
ttgggccctacagaagatataaagaagccttctgcagacttcaaaacactaccccatgta
gaaaaccctttaagccacagaactaaatctgaagaggaacgcagtgctggggcattagcc
aaaccagaaggcgaaatgcgacttgaaccagagttgcctgttctgtccccacaatctcca
actgggcaccgcccaaggggtcacactatctctgattctgagccgtcccgcagaggcagg
agatttcaggttgatccttttaagaacagcaccaaatccaccaaagctgagaaagtgcct
ggaatagatccaagctttgtatttttgcagctgtaccattccccattctttggtgatgag
tccaataagcctatactggtccctaacacacagacgtttgagagaacaatgggcctccta
gatcgaatcccgccctatgacacccacaaaattggtgttctttatgttggagaggggcag
gttggcaacgagcgcgcaatcctatccaatgagcatggctcgtaccgctacacacagttc
ctcacggggcttgggaagctcatcgagctgaaagacactcagccagacaagatcttcctg
ggagggttggacggttgtggagatgacgggcagttcacctactgctggcatgatgatatt
atgcaagtcatttttcagatcaccaccctgatgccaaacaaagagatagatccgaaccgc
tgcaacaagaaaaggcacgtgggcaacaactttgtcaatatcatctacaacgactcgggc
gagttctacaagttgggcaccctcaagggtcagttcaactttgtagatgtcaacattcag
cctttggactgcgagagcaacctggtgacactgcaatgccgaaaagatatggaaggcctt
gtagataccagcgtggcaaaaattgtgtctgacaaaaacctacccttcctggcccgccag
atggctctacattcaaatatggcttcacaagtccatcacagcaggtccaaccccacagat
atttacccttctaaatggattgccaggctgcgacacataaagaagatgagaccaaagata
caagaggagttgcaggagctgagtgccaacatgccctaccaggtccctactatggccaac
aagcccccttcacaaaacccacagactccccccggcgcatttgaaaccggccaaaggaca
aggctcatttctgctgtggacgatttcacggagtttgcttga
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