Xenopus tropicalis (tropical clawed frog): 100170553
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Entry
100170553 CDS
T01011
Symbol
lrrc49
Name
(RefSeq) leucine-rich repeat-containing protein 49
KO
K16606
leucine-rich repeat-containing protein 49
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100170553 (lrrc49)
04812 Cytoskeleton proteins [BR:
xtr04812
]
100170553 (lrrc49)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
100170553 (lrrc49)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
100170553 (lrrc49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
100170553
NCBI-ProteinID:
NP_001123802
Xenbase:
XB-GENE-1011788
UniProt:
F6VRZ1
LinkDB
All DBs
Position
3:98179507..98230898
Genome browser
AA seq
763 aa
AA seq
DB search
MLPGKYRGRLVPNAVNECGLHLVLQTNPVTYKNKPFEFRLSKEASLGNRIHPHDAEKNSS
SKKDGRHSSPMVGNKQTCIPLTANVTEVFGSASRYGRESLSLAAFTELPIHLSTKTRPRA
RSHCGTPNNNCEDTHPSKDNLNFLRQLSRLEPGISVIRRTAEEKAASPDKLSLERQNLTV
CPIIEGEEQLRLLYLHHNSITRIQNLSSLQHLIFLDLYDNNIEEISGLSSLRSLRVLMLG
KNRIQKISNLENLKNLDVLDLHGNQIAKIENVSHLRELRVLNLARNQINQVENINGLDSL
KELNLRDNKITFLRDVDTLPSLQLLYLSFNNISRINDILCLADSTSLSDVTLDGNPIAQE
SWYRQTILGHMLQLRQLDMKRITEEERRTASVLARKEDERKRESHKQALLKEKRRIAISN
AARQWDIQQNRVTPATSDQENEDCISSYQKPCQLNGTTAFELTEEQRSLDTVLSSAVQGL
SIIDSHLVEVEGDVLCLYGSGALESLDRSWSVQTSGSVSTISFTFINFDEIVQVLPKLRI
KFPNISHLKFKETNLITLHQFDVLAQLRRLDQLTVDPQGNPVVNFTLWKYYVLFRLNSFN
IQKINDSEVTQNDIVLSEKLFGILAYIASSELPQYRLHALLGEFRKKQFHHLLEGKSKKI
LATGEEVNDNRRVVGDSPSRATLNYIPQDLLNEKLEEIKEKKAFCHSYVQDLVNEAADIS
MKNESLQKLWPQMFIELVRDAVIEVRDKNSYMKQCLQRICEQK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccggcaaatatcgcgggaggctggtgcctaatgctgttaatgaatgtggactt
catctcgttctgcaaacaaatcctgtaacttacaaaaacaaaccgtttgaatttagacta
agtaaggaagcctctcttggcaacagaatacatcctcacgatgcagaaaagaacagcagc
agcaagaaggatggaaggcactcaagccctatggttggaaataaacagacttgcatccct
ttaacagctaatgtgactgaggtgtttggctctgcttcaagatatggaagagagtccctt
tcgctggcagcctttacagaacttcctattcacttatcaacaaaaactaggcccagagca
cgatctcactgtggtaccccaaacaacaactgtgaggatacacatccatcaaaagacaat
ttgaattttttaaggcagttgtcaagattggaaccaggaatatctgttatacggcgaact
gcagaagagaaagctgccagcccagacaagctcagtttagaaaggcaaaatttaactgtt
tgtcccataattgagggtgaggaacagctgcgacttctctatttgcatcataactctata
acaagaatacagaatctttcaagtctacagcaccttattttccttgatttgtatgacaat
aatatagaggaaataagtggactttcatctctcagatccctgcgtgtccttatgctggga
aaaaacagaattcagaaaatctcaaacctggaaaacctaaaaaaccttgatgtcttggat
ctacatggaaatcagattgcaaaaatagaaaatgtaagtcatttgagagaattgagagtg
ttaaaccttgctaggaatcaaataaaccaagtcgaaaacattaatggcctagattcatta
aaagaacttaaccttcgagacaacaaaatcacttttttgagagatgtggatactttaccc
agccttcagcttctgtatctcagctttaacaacatatcaagaattaatgacatcctgtgc
cttgctgattcaacatccctttcagatgtcacgcttgatggcaatcctatagctcaagag
tcatggtacagacagaccattctcggacatatgctgcagctacgacagctggatatgaag
aggatcacagaagaagaaagacgtactgcatctgttctggcaagaaaagaggatgagagg
aagcgtgaaagccataagcaagccttactaaaggagaaaaggcgaatcgcaatttccaat
gctgcacgccaatgggatattcagcaaaacagagttacgcctgctacgtcagatcaggaa
aatgaagactgtattagctcttatcaaaaaccatgccagttgaatgggactacagccttt
gaactaacagaagaacaaaggtcattggatactgtactcagcagcgccgtgcaaggactt
tcaataatagattcccatcttgttgaagtggagggagatgtcctgtgcctgtatgggtct
ggtgctctggaatctttagataggtcttggagtgttcagacatctggatcagtcagcacc
atctcttttacctttataaattttgatgaaattgtacaggttttaccaaaactaagaatc
aagtttcccaatatttcgcaccttaaatttaaagagaccaatcttatcacacttcatcag
ttcgatgtcttggcacaacttcggagactggatcaattaactgtggatcctcaaggaaac
cctgttgttaactttactctgtggaaatattatgttcttttcaggcttaacagttttaac
atacaaaagattaatgactccgaggttacccaaaatgatattgtcctatctgagaagctc
tttggaattcttgcctatatagcatcgtctgaactgccacaatataggcttcatgctctg
cttggggaattcagaaagaaacaattccatcaccttctggaaggaaaatctaagaagatt
cttgctacaggtgaagaagttaatgataacagaagagtagtaggggacagtccaagccgt
gcaacattaaattacattccacaagatctgcttaatgagaagctcgaggaaataaaagaa
aagaaggctttctgccactcctacgtgcaggaccttgtgaacgaggctgctgatattagc
atgaaaaatgaatccttgcagaagttgtggccccagatgttcattgagttagtgagagat
gccgtgattgaagtccgagataaaaactcctacatgaaacaatgtttgcaaagaatttgt
gaacaaaaatag
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