Xenopus tropicalis (tropical clawed frog): 100170565
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Entry
100170565 CDS
T01011
Symbol
cmtr1
Name
(RefSeq) cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
KO
K14589
cap1 methyltransferase [EC:
2.1.1.57
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100170565 (cmtr1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.57 methyltransferase cap1
100170565 (cmtr1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
100170565 (cmtr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
100170565
NCBI-ProteinID:
NP_001123814
Xenbase:
XB-GENE-970204
UniProt:
B3DLX8
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All DBs
Position
5:2865477..2886303
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AA seq
503 aa
AA seq
DB search
MKRRSDPEQQPSSVQSRKKKRIEELGLNLSSTSDDDTQYSNHGTQESSTSSTSSDSDSEE
KRPVFGSASIDAMSDPLAEGTSSRYSMYNSVSQKLMAKMGFREGEGLGKFGQGRKEIVET
SKQKGRRGLGMVLKGFEKELNINWRTEPEATAYEEVDWFPECTTEIPDADELSDWMTMEK
RKLIIDDETEFCRDSLLTNLLECKSAFDELEGEEMRRARTRSNPYEMIRGAFFLNRAAMK
MANVDHVFDYMFTNPKDSHGRPKLKDKESELLYFADVCAGPGGFSEYVLWRKKWHTKGFG
MTLKGPNDFKLEDFYAAPSELFEPYYGEGGVDGDGDVTRPENITAFRNFILDNTEHKGVH
FMMADGGFSVEGQENIQEILSKQLLLCQFLVGLSVVRTGGHFICKTFDLFTPFSVGLIYL
LYCCFERICLFKPLTSRPANSERYVVCRGLKEGIDDVRNYLFTVNRRLNHLRDSDQDVSL
VVPMEVLRGDRQFYDYMVRSNER
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggagatctgaccccgagcagcagcccagcagcgtccagagccgcaagaagaag
cgaattgaagagttagggctcaacctgagctccacctctgatgatgatacacagtacagc
aaccatgggactcaggagtcttccacgagcagcacaagctctgacagtgacagtgaagag
aagaggcctgtgtttggctctgccagtattgacgccatgtctgatcctctcgctgaaggc
acttcctcccgttactccatgtacaacagcgtctcccagaaactcatggccaagatgggc
ttccgcgagggcgaagggctggggaaattcggccaaggcagaaaagaaattgttgaaact
tccaagcagaaaggccgaaggggtctgggtatggtcctgaaagggttcgagaaagagctg
aatataaactggcggacggaaccagaggctaccgcttatgaagaagtggactggttccca
gaatgcaccactgagatcccagatgctgacgagttgtccgattggatgaccatggagaag
cgaaagctgatcatagacgacgagactgagttctgccgggacagtctcctgaccaacctg
cttgagtgcaagagtgccttcgatgagctggaaggggaggagatgagacgtgccaggacc
cggtccaacccgtacgagatgatccgaggagcctttttccttaatcgagcagcgatgaaa
atggccaacgtcgaccatgtgtttgactacatgtttaccaaccctaaagactctcatggg
aggccgaagctgaaggataaggagtcggagctgctgtattttgctgacgtctgcgccggc
cccgggggcttctcggagtacgtgctatggaggaagaagtggcacactaagggcttcggc
atgaccctaaagggacccaatgacttcaagctggaggatttttacgctgctcctagtgag
ctctttgagccttattatggggaagggggagtggatggtgacggagatgttacccgcccc
gagaacatcacagccttccgaaacttcatcctcgacaacacagagcacaagggggtccac
tttatgatggcggatggtggcttctctgtggaagggcaggagaacattcaggagattctc
agcaagcagctccttctgtgccagttcctggtgggactctctgtcgtccggacaggggga
catttcatctgcaagaccttcgacctattcactccattcagcgtgggcctcatttacttg
ctgtattgctgcttcgaacgaatttgcctattcaagcccctgaccagccggccggccaac
tccgagagatacgtggtttgccgggggctgaaagagggcattgatgacgtgcgcaattac
ctgttcactgtaaatcgccgactcaatcacctgcgcgactcggaccaggatgtcagtttg
gtggttccgatggaggtgctgaggggggacaggcagttctatgactacatggtccgttct
aatgagaggtaa
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