Xenopus tropicalis (tropical clawed frog): 100170568
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Entry
100170568 CDS
T01011
Symbol
nisch
Name
(RefSeq) nischarin
KO
K24095
nischarin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100170568 (nisch)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
100170568 (nisch)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_NXF1-5
LRR_9
PH_PLEKHM2
PX
LRR_14
LRR_LRWD1
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
100170568
NCBI-ProteinID:
NP_001123817
Xenbase:
XB-GENE-5968394
UniProt:
B3DLY1
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All DBs
Position
4:complement(153070790..153122670)
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AA seq
1294 aa
AA seq
DB search
MIGKNSRSLVEKRQKDLELYLQTLLGTFPLAVPKALARFLHFHLYEIHGIAAVLAEELFH
KGEQLLLAGEVFTVTPLQLYAVTQLLRRAKPTCSTGDARNDLGHIMDFACRLKYLRISGR
TGPVGTSNIHEQSLPCDLSIFKSLCQIEVSQCNARLLSGLTSCRRSLATISIHCSASSMK
DILVPEAYDFEQWEPEGVAPGSPITAVVPKWKVLTTLDLSHNRISCIDESVKLIPEIEFL
DFSHNDISTIENLQHLYNLIHLDLSYNKLADLTGIYTKVGNIKTLSLAGNVLESLRGLNK
LYSLVNLDLSQNRIEQLEEVRNIGGLPCLEGVLLAGNPLTVIPDYRTKVLALFGDRASEV
CLDSTRTTEKELDTVEVLKAIQKSRDARNKLASSEKKINEELRPSAAGSSSPARASSSSL
SRPISCSQGADSIDLSLAKRLSPGGAQQSGSGDPAAKQEAERGKPCEGDVQRDVSDPPPG
SGTSCREDAVTLDQWGPCPCMSLYQGDKELLPYISVLMEGALREPRHVAGEAENKWGPHS
CEFHKTEDGYFEMGPDTQTTDGTFPAAPAVSHIVWGLSFHSRGAAELRPFASCLVLTDTL
VVCFELAPNSAPNLLRLVLCFAYGDVAGFHFPVPDICLRVSLGDGEESVFVMSDLQGLQQ
LSACLKARCPPSHTPERIIPEPMSLQDLLLYISEVQQVVLSDSDVKGCFPVYLLNGEAAG
DPAQPEPPFHTQTWPPAASCAALLSIISTGLQPGGERLLPHWLLLTQQCFILITVDISTI
TGNRAEYAGNALTMSAIPLASVALEPESPPAENKPPQFAGHTVPLMVDYRAVSAFFVVPQ
NKFHFLSVFNQLRKSLQGIKNLVICKSIKNLDDSQSWVGDAHRPPTHSLSPVAPHRARPP
QYPSESLTQRLSEENHIPFYLPASASLRFIAELKGKALVELFRSCVAEAEGEELRHLTWA
SLLLYGTPDTEFPSCILLSTQAVYFLLDDTQNPKEQGYWRKRPARSPLQISFCFAIKFSS
LQSVNIGLFDQYFRITGSSPSQVVTCLTRDSYSTHSFIQQLMSALSLLARAPSPEPLEKD
FYSEFGTKNTGRMENYELIHSSRVKFVYPNEEEMGDLTFIVSEKMDPSSPIQSLNILLYV
LGFRVSCVGRTDPAPSLQPNSLILTSSDLFLFNEDYISYPLPDFAKEPPKKDKYQLVDGR
RIRDLDRVLMGYQTYPQNLTLVFDDVHKQDFMHSVSLDHFGETLGGSPGAVGANKEIQWN
IFIPSADSREKLISLLARQWESLCGRELPIELTG
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggaagaactcgagaagtttggtggaaaagcggcagaaagatctggaattgtat
ctgcagacgctgcttggcacgttccccctcgctgtgcccaaagccctggcacgcttcctg
catttccacctctatgaaatccatggaatcgctgcagttctggccgaggagcttttccat
aaaggggagcagttgctattggccggagaggtatttaccgtgaccccactgcagctctat
gccgtgacgcagttactccgacgcgccaagcccacctgtagcaccggcgacgccaggaac
gacctggggcacatcatggattttgcttgtagactgaaatacctccggatcagtggccgg
accggtcctgttgggacgagtaatatccatgagcagtctcttccctgtgacctctccatc
ttcaaatccctctgtcagattgaggtcagtcagtgcaacgcccggctcctcagcggcctc
acttcctgtaggaggagtttagccaccatcagcatccactgctccgcctcttccatgaag
gacattctggtgccggaggcctatgactttgagcagtgggagccggagggagtggcccct
gggagccccattactgcagttgtgcccaagtggaaagtgctcacaactctggatctgagc
cacaatcggatctcctgtatcgatgagtctgttaaactgattcctgagattgaattcttg
gatttcagtcacaacgacatctctacaatagaaaatctgcagcacctgtacaacctcatt
cacttggacctgtcctacaacaaactggcagacctgactggcatctacactaaggttggg
aatatcaagactctcagtctggccgggaatgtactggaaagtctccgcggcctcaataaa
ttgtattcacttgttaacctggatctgagccagaacagaattgagcagttggaagaagta
aggaacatcggggggctgccgtgcctggagggggtgctcctcgctgggaaccctctcact
gtcattccggattacaggaccaaagttctggcgctgtttggggacagagcgtctgaggtc
tgtttggacagtaccagaaccacagagaaagagctggacacggtggaagtgctgaaggcc
atacagaaatcaagggacgcacggaataaattggcttcttctgagaaaaagatcaatgag
gaattgcgaccctctgctgctggctcttcctcccctgcccgtgcttcctcttcctctctc
tctcggcctattagctgcagccaaggtgcagattctatagacctttctttagcgaaaaga
ctgtccccgggtggagcccaacagagcggctctggggacccggcggccaagcaagaagcg
gagagagggaagccgtgtgagggggatgtacagagagacgtgtctgaccctcccccgggc
agtgggaccagttgccgggaagatgccgttacgttggaccaatggggcccctgtccctgt
atgtcgctgtatcagggggacaaggagctgctcccctacatttctgtgctgatggagggc
gcattgagggaaccccgacatgtcgctggggaggcggagaataagtgggggccccacagt
tgcgagttccataagacagaagacggttactttgagatggggccggatacccaaacgaca
gatggaaccttcccagctgccccggctgtcagtcacatagtgtggggtctctcgttccac
agtcggggggcagcggagctcagacccttcgcctcgtgcctcgtgctcaccgataccctc
gtcgtctgctttgagctggcgcccaactccgcccccaacttactgcgactggttctgtgt
ttcgcctatggggacgtcgcaggatttcatttccccgtcccggacatttgcctgagagtc
agtttgggggacggggaggagagtgtctttgttatgtcagacttgcagggcttgcagcaa
ctctctgcctgtttgaaagcccgctgccccccaagccacacccctgagaggattattcct
gaaccaatgagcttgcaggatttgctcctttatatttctgaggtgcagcaagtcgtactg
agcgatagcgacgtaaagggatgtttcccggtgtatctgcttaacggtgaggccgccggt
gaccccgcccaaccagagcctccatttcatacacaaacatggcctccagctgcctcctgt
gctgcactcctttccatcatatctacaggccttcagcccgggggggaaaggctgctcccc
cattggctactcctcactcagcaatgtttcatactaattacagtcgacattagtacaata
accggtaaccgggcggaatacgcgggaaatgcgttaacgatgagcgccattcccttggct
tcagttgcgttggagccggagagtccccctgctgagaataagcccccccagtttgccgga
cacactgtccctttaatggtggattacagagcagtcagcgcattctttgttgtgccccaa
aataaattccacttcttgtcggtgtttaaccagctgagaaagtcccttcaggggataaag
aacttggtgatttgcaaatccataaaaaatctggacgattcccagagctgggtgggcgac
gcccacagacccccaacgcactcgctaagccccgttgcgccccacagggcacggcccccc
cagtacccatcagagagcctgacacagagattatcagaggaaaaccacattcccttctac
cttcctgcatcggcctcgctgcgcttcattgctgaactgaaggggaaggcgctggtggag
ctgttccgtagctgcgttgccgaggcagagggggaggagctgaggcatctcacgtgggca
tcactgctgctttatgggacccccgatacagagtttccatcctgcattttactttcaaca
caagctgtttattttctcttggatgatactcagaaccccaaagaacaaggttattggagg
aagagaccagcgcgcagccccctccagatttccttctgtttcgccatcaaattcagcagt
ttacagtctgtcaatatcggactttttgatcagtatttcaggataacaggttcttccccc
agtcaggtggtcacgtgtctgaccagagacagttacagcacccactccttcatccagcag
ctcatgtctgccctgtccctcctggcacgggccccgtcccccgaacccctggagaaggat
ttctactcggaatttggtacaaagaacacggggagaatggaaaactacgaactgatccat
tccagcagagtgaaattcgtttacccaaacgaggaggagatgggagacctgacgttcata
gtgtcggagaagatggacccttccagccccatccagtcgctaaacattctgctgtacgta
ttgggcttccgggtctcttgtgtgggcagaaccgacccggcgccctccctgcagcccaac
agcctcatcctcaccagctccgacctgtttctgttcaatgaggattatatcagttacccg
ctgccagactttgccaaggaaccccccaagaaggacaaataccagttagttgatgggagg
agaatcagggatttggaccgggtgctgatgggataccagacctaccctcagaacctcacc
ttggtgtttgatgatgttcacaagcaggatttcatgcacagcgtctctctcgatcacttt
ggggagacgctggggggctctcccggggccgtgggagccaataaagagatccagtggaac
atttttatcccaagcgcagactcccgggagaagctgatctctctgctcgcccgccaatgg
gagagcttgtgcggcagggagcttcccatcgaactcaccggctaa
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