Xenopus tropicalis (tropical clawed frog): 100170572
Help
Entry
100170572 CDS
T01011
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100170572 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100170572 (hbs1l)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100170572 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBS1_N
GTP_EFTU
AAA_22
G-alpha
Motif
Other DBs
NCBI-GeneID:
100170572
NCBI-ProteinID:
NP_001123821
Xenbase:
XB-GENE-944105
UniProt:
B3DLY5
LinkDB
All DBs
Position
5:complement(71570588..71636932)
Genome browser
AA seq
325 aa
AA seq
DB search
MARHRNVRGYNYDDDFDDDDLYGQSVEDDYCISPATAAQFIYKRDRQTSFTEPLEEEEDE
YEEPDKLKPNDSSLSAVDQARLYSCLEHMREVLGESVMEQVMIDAVLKSQFDVAKALDIV
FKQDCNKNIKPANQDIITERPTKGKTRGLQASEHEYEIVPKMAKMIVSGKKQTMGFDVPS
VSSEINGQSVKGQTNEEAMEEADNGLQSANPIPSSQNTEEHSSIMTPGKSSNKAKQKINI
KEELEKRQGGKHLLNLVVIGHVDAGKSTLMGHLLYLLGHVNKRTMHKYEQESKKAGKASF
AYAWVLDETGEERQRGDDGCWHDQV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcatcgcaatgtgcgtggatacaactacgatgatgactttgatgacgatgac
ctgtatgggcagtctgttgaggatgactattgcatttccccagcaacagctgctcagttt
atatacaaacgggacaggcaaacaagttttacagaaccattagaagaagaggaggatgaa
tatgaagaacctgataagttaaaaccaaatgactcctctctaagtgctgttgatcaagcc
agactctattcctgccttgaacatatgagagaagtattaggggaatcagtgatggagcaa
gttatgattgatgctgttttgaagagtcaatttgatgtagccaaggctctggacatagta
ttcaaacaagactgcaacaaaaatattaaaccagccaatcaagatattattacagagaga
ccaacaaaaggaaaaacaagagggttgcaggcctctgaacatgaatatgaaattgttcca
aaaatggccaaaatgattgtctctggaaagaaacaaacaatgggatttgatgttccgagt
gtctcatcggaaataaatggtcagagtgtaaaaggccaaactaacgaagaagcaatggag
gaggcagataatggcctgcagtctgccaatccaattccttcctcccaaaacacagaagaa
cacagctctatcatgacccctggcaaaagctccaacaaagcaaagcagaaaattaatata
aaggaggaactggagaaaaggcaaggaggaaaacacctgctaaaccttgtggtgatcggc
catgtcgatgctgggaaaagcacacttatgggccatctgttgtacctcctggggcatgtg
aacaaaagaactatgcacaaatatgagcaagaatccaaaaaggctggaaaagcttcattt
gcttatgcatgggtgctggatgagacaggagaagagaggcaaaggggtgacgatggatgt
tggcatgaccaagtttga
DBGET
integrated database retrieval system
