Xenopus tropicalis (tropical clawed frog): 100170583
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Entry
100170583 CDS
T01011
Symbol
gabra2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04080
Neuroactive ligand-receptor interaction
xtr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100170583 (gabra2)
04082 Neuroactive ligand signaling
100170583 (gabra2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100170583 (gabra2)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
GABA-A
100170583 (gabra2)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
100170583
NCBI-ProteinID:
XP_002933509
Xenbase:
XB-GENE-1000398
UniProt:
F7DCL6
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Position
1:complement(37981117..38056587)
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AA seq
451 aa
AA seq
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MGTTLASCRKEILLFFTLVLWESSSQVLGDTVDNDAKNNITIFTRILDRLLDGYDNRLRP
GLGDRVTEVHTDIYVTSFGPVSDTDMEYTIDVFFRQNWQDERLRFKGPMHILRLNNLMAN
KIWTPDTFFHNGKKSIAHNMTMPNKLLRIQDDGTLLYTMRLTVQAECPMHLEDFPMDAHA
CPLKFGSYAYTTSEVTYVWTRNATESVVVAPDGSRLNQYVLLGHLVGKETIKSSTGEYTV
MTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSIS
ARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKKKEKAS
VIKKNNAYAVAVANYAPNITKDSALPTISKSATADPNKAKPQEAKKTFNSVSKIDRMSRI
VFPLLFGTFNLVYWATYLNRELAIEGLVLSK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggaactaccctggcatcctgcagaaaggaaatcctgctcttctttaccctggtgctg
tgggagtcatccagccaagttctgggggataccgtggataatgatgcaaagaacaacatt
accattttcacgaggattctagatagacttctggatggctatgataatcgtctgaggcct
ggactaggagaccgagtaacagaagtccacactgatatctatgtgacaagcttcggtcct
gtttctgatacagatatggagtatacaattgatgtcttttttcgtcaaaactggcaagat
gaacgactgagatttaaagggccaatgcatattcttcgattaaacaaccttatggcaaat
aaaatttggactccggatacattcttccataatggaaagaagtctatagcccacaacatg
accatgccaaataaactgttaaggattcaagatgacggaaccctcttgtatacaatgagg
ctgactgtccaagctgaatgtcccatgcatttggaagattttcctatggatgctcatgct
tgtccattaaaatttggaagctatgcctatacaacttctgaagtgacatatgtatggaca
cgcaatgccacagagtctgtagtggtggcaccagatggatctcgattaaaccagtatgtt
cttttgggccatttagttggaaaagaaaccattaaatccagcacaggtgaatatacagtg
atgacaacacattttcatttgaaacgaaagattgggtactttgtgattcagacgtatctt
ccctgcatcatgacagttattttatctcaggtgtctttttggttgaacagagagtctgtc
cctgcaagaacagtgtttggtgttactactgtattgacaatgacaacactcagtatcagc
gctagaaactcccttccaaaagtggcctatgcaacagccatggactggttcattgcagtc
tgctatgcttttgtattttctgctttgatagagtttgcaactgtcaactactttactaaa
agaggatgggcttgggatgggaaaagtgttgtcaatgacaagaaaaaagagaaggcttct
gtgataaagaaaaacaatgcatacgcagtggcggttgcaaattacgccccgaacatcacg
aaagattcagctctgccaacaatatctaaaagcgccaccgcagatccgaacaaagcgaaa
ccacaggaggcaaagaaaacatttaacagcgtcagtaaaatcgacagaatgtctagaata
gtctttccacttttattcggtacattcaatttggtatactgggcaacttacctgaatagg
gagctcgccattgaagggctggtattatccaaatag
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