KEGG   Xenopus tropicalis (tropical clawed frog): 100170623
Entry
100170623         CDS       T01011                                 
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03410  Base excision repair
xtr04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100170623
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    100170623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100170623
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100170623
SSDB
Motif
Pfam: PARP4_MVP-ID VIT PARP VWA_3 WGR-like_PARP4 BRCT VIT_2 VWA BRCT_2 VWA_2 PTCB-BRCT LIG3_BRCT DUF6473
Other DBs
NCBI-GeneID: 100170623
NCBI-ProteinID: XP_031753138
UniProt: A0A8J1J5J4
LinkDB
Position
2:158466233..158566877
AA seq 1836 aa
MTVAIFSDCVFFLKLNDLSFNERKALKLTVTSNGGVISFVLNQKCTHVVVNTIGCLSSSQ
QKNVQKHQIPIVDSQFIWQCLEKKCLIQDYQYPTAGVKPSEKEPEGWQADPEKTVFPKKV
PSLQDNDEFINRDYSEYDADTLPDPPDAEVAKYCFFQNGPIVAVLELLCIPESSSFLFQI
SKTICNSNGSEPDSSYMFKHTAEAACNKYEKCTEDLEKEGFKRAKRIPPKVALHTSEALQ
KVLLEEAINATKLSPDVGYFVESVWIEALGHLDNILARPVNSISLNDVSKAEGVLLQVRK
ALDTGTEPGDIRKAMAEFYRLIPHKKPLLANIDKKLLSTKQDLCQLIRDMVSVCETNSSK
PNPSSLAKYQALRCQIEHVEPNTEEFHQVSQQIVENKHCEESINILKIFRVGKLSEATGF
QKNLGNVKSLLHASSPRHFVGILSRGLLLPKNVEDDLGLKRTDIGNLGSGIYFSDSISTS
VKYSEPSVTNGARLLLVCEVALGNCKDLYKRDFSLTGAPSGFNSVHGVRQMPGRKSDFED
DEFVVYKKDQIKMRYAVQFCTDKDQVNMERDKLSVQFEPMEEDVGEEPVQVEDLMLENLP
EPQSINGGLQSVHGNQIPLENIHVKGKMMDLVAEVILFQTYINKSSVPIEAKYVFPLDGT
AAVCGFEAFINGKHVIGEVKEKEQAHKEYRAAISEGHGAYLMDQDAADVFTVSVGNLPPN
ATVIIKITYITELILEYGSVIFNIPGTVASWQKDKALKENTQDTVEKVCVEESGVPQGCF
SLEMSVEMSFKIENVLSFTHSISTKKTDCKAVIATKKDSSLDDEGFQLRVYLESSFLESS
WNQPRMWVEKHPKEDSEACMLVFLPSFKTSIQSWDLTILLDCSNSMESTFQSAKRIALLA
ASSLNPWHNINIISFGTGHKEFSIRPKESQNLIPELEQFIKMAKPNMGNTELWKPLQSLC
LLAPPSDMHNVLLISDGHIQNESLVFQILKKNAGKVRLFTCGVGATANRHMLRCLAQYGA
GFFEFFEDKSKSSWKKKMEAQLERMDSPACTSASVKWMQFSDNDPEPVQAPAHIPALFNR
SFLLVYGFAPRCTQAKLQALIDDNELDTMVSTTELQKTRGTMLHKLTARAVIKDYEDGIL
HEKEHEHEMKKQQMKSFIIELSKKYSIVTQFTSFVAVEKRDAQEKPKDYVPNVLEIISTE
DVDILPYMMWETQEEDQAAVLQEEDMQEEEEEYMDQEAPDLSGSDLDDYRLPLSGSDSDD
YCCYMADFELAKSKKKAKRGPIETEEAQPFRRMRRVTTMCHMSPPRSEAQPSEHDGEREW
RTLHAEQEVERIGGRHGGPHIDRGNRRGAWMPERTEPAMVEAAMPMRHMDRCGTEAQPSE
HVMQERAAKPMCLMSLPRSVMQERAAEAMRHLGFRRTEIMDMLSPMPPSNAPISPSYCEK
RKVHADMLEIMDMPAPTSPSYAPTSPSYLQRRKSFSLMGAAPSSAVSYAAPTFGSATAGF
TSSAVSDAAPAFGSAAARPPLFGYKSSAVSDAAPGFGTVTAAQSSGFFCSAGFRFGALVP
PPPPIPGGVCRFAPPPPPPVPDPLLMATGRVCRFAPPPPPPVPDPLLMATGRLRIPAGGV
LSFAPPPPPPAPVPDPPPIPVDRLLMATGKPRKHAGRVRAKALFALAPSAPTSDSEVKAR
IAAKIRRAPPSFVPLSALQHEEGYWLLDEKLGSLLNINVNYLIDVFLSKNGIQSLGRKGK
EEVLALIATLLVLQMIRTYKLVDITFKSLMKLDESFCTSPFYQTIEKSVKWARKKDEQYP
GICSRLGLGKDWESATRKLLSIDPVDLSSDLYPAVV
NT seq 5511 nt   +upstreamnt  +downstreamnt
atgactgtggcgatcttttcagactgtgtgttcttcctgaaactaaacgacttatctttt
aatgagagaaaagcgttaaaattgacagtaacctcgaatggtggagttatatcctttgtg
ctaaatcagaagtgcacacatgttgtggtgaacaccattggctgtttaagttcttctcag
cagaagaatgttcagaagcatcagattccaattgtggacagtcagtttatatggcaatgt
ctagaaaagaagtgtcttatccaggactatcaatatccgactgctggtgtcaaaccaagt
gagaaagaaccagaaggctggcaagcagatcctgagaaaactgtcttccctaaaaaagtt
ccatccctgcaagacaatgatgagttcatcaacagggattacagtgaatatgatgcagac
accctccccgaccctccagatgccgaagtagcaaaatactgtttttttcaaaatggtccc
attgtggcagttctggagctgttgtgcattcctgaatcctcttcattcctatttcaaata
tctaaaacaatttgtaattccaatggatcggagcctgacagctcctatatgttcaaacac
acagcggaggcggcttgtaacaagtatgagaagtgcactgaggatttagaaaaagaaggc
tttaagagagcaaagcgtatcccaccaaaggttgccctgcacacatctgaggctctgcag
aaggtcctgcttgaagaagccataaatgctaccaagttatctccagatgttggatatttt
gtggaaagtgtttggattgaggctcttggccatttggataacatcctcgcgcgtcccgta
aacagcatcagtctgaatgatgtaagcaaagcagagggtgttctgctccaggttaggaaa
gctttggacacaggaacagaacctggagacataaggaaagcaatggctgagttttatcgg
ctcattccccataagaaacctctgctggccaacattgataagaaacttttgtcaacaaag
caagatctgtgccagcttattagagatatggtgagtgtatgtgaaaccaactcatcgaag
ccaaacccaagcagccttgccaaataccaggccctgcgatgccaaatagagcatgtggag
cccaatactgaggaatttcatcaggtgtcacagcaaatcgtggagaacaaacactgtgag
gagtcgattaacatactgaaaatattccgcgttgggaaattaagtgaagccactgggttt
caaaagaatcttgggaatgtcaagtccctgctccatgcatcttccccacgtcactttgtg
gggatcctttcccgtggactgctcttgccaaaaaatgtggaagatgatttgggtttaaaa
agaactgatattggaaatcttggaagtggaatttacttcagtgattccataagtacaagt
gttaaatattcggaacccagtgtaaccaatggggcgcgtctcctgttggtttgtgaggtg
gctctggggaactgcaaggatctctacaaaagagacttctcccttactggagctccaagt
ggctttaacagcgttcatggtgtccgacaaatgccagggaggaaatctgattttgaggat
gatgaatttgtggtatataaaaaggatcaaataaaaatgagatacgccgtgcagttttgc
actgataaagaccaagtcaacatggaacgcgacaaactttctgttcagtttgagcccatg
gaggaagatgttggagaagaaccagtgcaggtggaagatctcatgttggagaatcttccg
gaaccacagagcataaatggcggcctccagagtgttcatggcaaccagatccctttggaa
aatattcatgtgaaaggcaaaatgatggatttagttgcagaggttatattattccagacc
tacataaacaaatcctctgttcccatcgaggctaaatatgtttttcccctggacggcaca
gcagccgtgtgtggctttgaagcatttataaatggaaaacacgttatcggagaggttaaa
gagaaggagcaagcgcataaggagtacagggctgctatcagcgagggacatggggcttac
cttatggaccaggacgctgctgacgtcttcactgtaagtgttggaaacctgcccccaaac
gccactgtaatcattaaaatcacgtacataacggaattgattctggagtatggatcagtg
atattcaacattcctggcacagtggcatcttggcaaaaggataaagctctgaaagaaaat
actcaggatacagtagaaaaagtctgtgttgaagaaagtggtgtgccacaaggttgtttc
tctctggagatgtctgttgagatgtcttttaaaatcgagaatgtgttaagtttcactcac
agtatttcaacgaaaaaaactgattgcaaagctgtgattgcaactaaaaaagacagttca
ttggatgacgaggggtttcagttgagagtctacctggaatcaagcttcttggagtcttct
tggaaccaaccgagaatgtgggtggaaaaacaccccaaagaagacagtgaggcatgcatg
cttgtgttcctgcctagttttaagacaagcatacaatcctgggatttaaccatcttactt
gattgctccaattctatggaatccactttccaaagcgcaaaacggattgctctgcttgca
gccagctcgttaaacccatggcacaacataaacataatcagctttggtacaggtcataag
gaatttagcatccgtccaaaagagagccagaatttaataccggagctggagcagtttatt
aaaatggccaaaccaaacatgggaaacacagaactttggaagcctctgcagtccttatgt
ttgctggctcctcccagtgacatgcacaatgttcttcttatatctgatggacacatccag
aatgagagcctcgtctttcagatcctcaaaaagaatgcagggaaagtgcggctgttcacc
tgtggcgttggtgcaacagccaatcgccatatgttgcggtgtttggctcagtacggtgct
gggttctttgaattttttgaagataaatccaagtccagctggaaaaaaaagatggaggca
cagctggaaagaatggattcccctgcatgcactagtgcatctgttaaatggatgcagttc
agtgataatgacccagagcccgttcaagccccagcacacataccggctttgttcaaccgc
agtttccttcttgtttatggctttgctcctcgttgcactcaggccaagctacaagcttta
attgatgacaatgaactggacactatggtatcaactacagaattacagaagaccagagga
acgatgcttcataaactgacggcaagggctgttattaaggattatgaagatgggatcctg
cacgagaaagaacatgaacatgagatgaaaaagcagcaaatgaagtcctttattattgag
ctgagcaagaagtactcaatcgtcactcagtttacaagctttgtcgctgtagagaaacgg
gatgcacaagagaagccaaaggactatgtaccaaatgtgcttgaaataatatccacagaa
gatgttgatatattaccatacatgatgtgggaaacacaggaagaggatcaggccgctgtg
ctgcaggaagaagatatgcaggaagaagaagaagaatatatggatcaagaagcaccggat
ttgtctgggtctgatttagacgattatcgtctgccattgtctgggtctgattcagatgat
tattgttgttatatggctgactttgaattggcaaaaagcaagaaaaaagcaaaacgtgga
cctatagaaacagaagaggcacaacctttcagacgtatgagacgtgtaactacaatgtgt
catatgagtcctccccgatcagaggcacaaccttctgaacatgatggagagcgagaatgg
cggacgttacatgccgagcaggaagtggagcgcataggtggaaggcatggtggaccgcat
atcgatcgagggaacaggagaggcgcatggatgccagagcgaacggagcctgcgatggta
gaagctgccatgccaatgcgccatatggatcgttgcggaacagaggcacaaccttctgaa
catgtgatgcaggaaagagctgccaagccaatgtgtcttatgagtcttccccgatcagtg
atgcaggaaagagctgccgaggcaatgcgccatttgggttttcgccgaacagaaatcatg
gacatgctgtctccaatgcctccatccaacgctccaatctctccatcatattgtgaaaag
cgcaaggttcacgctgacatgctagaaatcatggacatgccggctccaacctctccatca
tatgctccaacctctccatcatatcttcaaaggcgcaagagcttttctcttatgggcgca
gctccaagctctgctgtttcgtatgcagctccaacttttggttctgcaactgcagggttt
acaagctctgctgtttcggatgcagctccagcttttggctctgcagctgcaagacctcca
ttatttggttataaaagctctgctgtttcggatgcagctccaggtttcggcacagtgact
gctgctcagagctctggctttttttgttcagcaggtttcagatttggagctctagttcca
cctccacctccgatacctggcggggtttgcagatttgcaccgccacctccacctccagtt
ccggatccacttctgatggctactggcagggtttgcagatttgcaccgccacctccacct
ccagttccggatccacttctgatggctactggcaggcttcggatacctgctggcggggtt
ttaagctttgcacctccacctccacctccagctccagttccggatccacctccgatacct
gttgacaggcttctgatggctactggcaagcctcggaaacatgctggcagggtcagagcc
aaggctttgttcgctctagctcctagtgctccaacttcagactccgaagttaaagcaaga
attgctgctaaaataagaagagcccctccatctttcgtccccctttcagctctacagcat
gaggagggatactggctgctggatgaaaagctcggatctctattgaacattaatgtcaat
tacttgatagatgtgtttttatccaagaacgggattcagtctcttgggaggaaaggaaaa
gaagaggtgctggcacttattgcgaccctcttggtgctgcaaatgattcgcacgtataag
ttggtggacataacatttaagagtctgatgaaactggacgaatcattttgcacaagcccc
ttttaccagacaattgagaaatccgtcaaatgggcacgaaaaaaagatgaacaatatcct
ggcatctgttctcgacttggattgggcaaggattgggaatctgccacccggaagttatta
tccattgatccagtggatctttcctctgatctctatcctgctgttgtgtaa

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