Xenopus tropicalis (tropical clawed frog): 100170625
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Entry
100170625 CDS
T01011
Symbol
ric1
Name
(RefSeq) RAB6A-GEF complex partner protein 1 isoform X2
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100170625 (ric1)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
100170625 (ric1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Motif
Other DBs
NCBI-GeneID:
100170625
NCBI-ProteinID:
XP_002934219
Xenbase:
XB-GENE-1001477
UniProt:
A0A8J0QNB1
LinkDB
All DBs
Position
1:complement(126934549..126993776)
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AA seq
1420 aa
AA seq
DB search
MYFLSGWPKRLLCPLKTVEKPFHIQPDSQRIFFSVLSQTQLSIWYSRPSVLIASYKESAK
ATAQFGNYKQAEWRPDSSMIVIATANGYILFFDIIPVGEDKYLYEPVYPKGSPHIKLNPH
YKEEQCAPALNLETKKVMDLQASITSIQSMMEDLLVATEDGLLHIIHWEGMTNGRKAINL
TTIPFSIDFQPSRAGSFLDFGDVHIRDMEYCATLDGFAVVFNDGRVGFITPGSNRLTADQ
IHGVWAPDVVDGTCVAVNNKYRLMAFGCVGGSVLVFTIDNTTGALQLSHKLELTPKQYPD
MWNKTGAVKLIRWSPDCSVVMVTWECGGLSLWSVFGAHLICTLGGDFDYRADGTKKEALR
ICSMSWGTEGYHLWAITADSSQNTGYEMSDKSVPQQSGILQFQFIKSALTVNPCMSNQEQ
VLLQGEDRLYLNCGDATQTQNARNGSSQSEHKPLRDRSPFPGSSGNSQGLSTLLGHRHWH
VVQIQSTYLQSNWPIRYTAIDKVGQNVAVVGKFGFAHYSLLTKKWKLFGNITQEQNMVVS
GGLSWWKEFIVLACFNLSEQQEELRVYLRTSNLDNAFAHVIKVQLETLLLSIFRDMVIIF
RADCSICLYSIERKKEGPNPSVCLQVLQEVSMSRYIPHPSLVVSVTLTSVRTETGISLKM
PQQACDAESILLNLAGQLIMLQRDRSGPQIREKDAKTHQHKLLPFCAPVVLAQSVENVWS
TCRANKQKRHLLEALWLSCGGAGMKVWLPLFPRDHRKPHSFLSKRIMLPFHINIYPLAVL
FEDALVLGAINETVAYDCLNNLSTSSEHLEVHFPFCIVERTSQIYLHHILRQLLVRNLGE
QALLLAQSCAALPYFPHVLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVV
HCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLETAASYLIILQNMEAAAVSRQHATLL
FNTALEQGKWDLCRHMIRFLKAIGSGEMETPPATPTTQEPSSTGGFEFFRHRSISLSQSA
ENFPSGKFNLQKTHSMPSGAAGKRWSKDSDCAENMYIDMMLWRHARRLLEEIRLKDLGGF
AAQLGFELIGWLCKERTRAARVEDFVTSLKKLHKDFLWPFPVIPVASINSPFKNGKFRTV
GEQFLKSQSADGFLNMDVETPIPSAVRSHSWMGSLGTSQREMDSTSSHSPHTQDAFLSPL
MNKADECSIGSATDLTETSSMVDGDWTMVDENFSTLSLTQSELEHISMELANKGPHKSQV
QLRYLLHVFMEAGCLEWCVIIGLILRESSVINQVINLLQCPEVAEEMLQGIQSGLQAVDV
WATTDCPGYKPFLNIIRPPLQKLSATTVEQVQTEAFQPTIPIKFTEQSSPCIEESRISTS
HSISPQSDTSSVSGSRHEEDFSRQEKDETSQEGNYDCIVS
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtattttttaagtgggtggccaaaaaggctgctatgtccactaaaaactgtggagaag
ccatttcacattcagccagactcccagaggatatttttctcggtgttgtcccagacacaa
ctcagtatttggtacagcaggcccagcgtattaatagccagttacaaagagtctgcaaaa
gcaacagcacagtttggaaattataaacaagcagaatggagaccagacagcagcatgatt
gtcattgcaactgccaatggatacattttgttttttgacatcataccagtgggagaagac
aagtatctgtacgagcctgtgtatcctaaaggtagtccccatataaagctcaacccccat
tataaggaagaacaatgtgctccggcgttaaatttagaaaccaaaaaagtaatggatttg
caagcttccatcacaagtatccagtccatgatggaagatctcctggtggccacagaggat
ggcttgcttcatattattcactgggaaggcatgacaaatggcaggaaagcgatcaacctt
acaacaataccattctctatcgactttcaaccttccagagcaggttcattcttggatttt
ggggatgtgcacatacgagacatggagtactgtgctacacttgatgggtttgctgttgtg
tttaatgatggacgtgttggcttcatcacaccaggatcaaatcgtctcacagctgatcaa
atccatggtgtttgggcaccggatgttgttgatggaacctgcgttgcagtgaacaacaaa
tataggttaatggcatttggttgtgtaggtggatctgttctagtcttcactatagacaac
accacaggggccttgcagttgtcccataaattggaacttacaccaaagcagtatccagat
atgtggaataagactggggctgtgaagctgataaggtggtctcctgattgcagtgttgtt
atggtgacctgggagtgtggaggcctgtccttatggagtgtatttggtgcacatcttata
tgtactctaggaggggattttgattaccgagctgatggtaccaaaaaagaggctttgaga
atttgctctatgagctggggtactgagggttaccatttgtgggcaatcactgctgactct
tctcaaaacactggctatgagatgagtgataagtctgttccccagcaatctggaatcctg
cagtttcagttcatcaaaagcgcccttactgtgaatccatgcatgagtaaccaggagcag
gttctcttacagggggaggaccgtttgtacttgaactgcggggatgcgactcagacacag
aatgcaaggaacggttcatctcagtctgagcacaagcctctgagagacaggagtcctttc
cctggtagcagtgggaattctcaaggattaagcactttactgggacacagacactggcat
gtagtacagatacagagtacctatctgcagagtaactggcccattcggtacactgccata
gacaaggttgggcagaatgttgcagttgttggcaaatttggatttgcgcattattctttg
ctcaccaaaaaatggaagttatttggtaatatcacccaggagcagaacatggtggtgagt
ggaggactgagctggtggaaggaatttattgtcctagcctgttttaatttaagcgagcaa
caggaagagctacgtgtatatctgcgaacatccaatctggacaatgcctttgctcatgtc
atcaaagtacaattggaaactctgttgctcagcatctttagagacatggtgatcatcttt
cgagcagactgctcaatttgcctgtatagtattgaaaggaaaaaagagggccctaatcct
tctgtgtgtttacaagtcttgcaagaggtgtccatgtcacgttacattccccacccttca
cttgtagtgtcagttactttaacgtctgtgagaacagagacgggtatctccctaaaaatg
ccccagcaggcatgtgatgcggaaagcattttgttgaatctagctggtcagctgatcatg
ctgcaaagagataggtctggccctcagattcgagaaaaagatgccaagacccatcagcat
aaactattacctttttgtgctcccgttgtccttgcacagtctgtagaaaatgtttggagc
acctgtcgggccaacaaacagaaacgtcaccttttggaagctctctggctgagctgtggc
ggagcaggcatgaaagtatggcttcctttgtttcccagggatcaccgtaaaccacattcc
ttcctgtccaaacgcatcatgctgccttttcacataaatatttacccactggctgttctg
tttgaagatgcccttgttcttggagccatcaatgagactgttgcatatgactgtttaaat
aacctcagcacttccagtgaacatttagaagtccattttcccttctgtattgtggagagg
acatcccagatctacctccatcacattttacgtcagcttttagtcaggaacttaggggag
caggccctgcttctggcacagtcatgtgctgctcttccttattttcctcatgtactagaa
ctgatgctccatgaagtactggaagaagaagctacctcacgggagcctattcccgaccct
ttgcttcccactgtggctaagttcattacagagtttccacttttcttgcaaacggttgta
cattgtgcacggaagacagaatatgccctgtggaattatctttttgctgctgttggtaat
cccaaggatttgtttgaggagtgcctaatggctcaggacctagaaacagctgcctcttat
ctcatcatcctccagaacatggaagcagctgccgttagcaggcagcatgctacccttctg
tttaatactgctttggagcaagggaaatgggatctctgcagacacatgatcaggttcctg
aaagctattggatctggggaaatggaaaccccacctgccactcccaccacacaggaacca
agttccactggtggctttgaattctttaggcaccgcagtatcagtttatctcagtctgct
gagaattttccttctggaaagtttaacctccaaaaaacccatagcatgccctctggagct
gctggaaaacggtggagtaaagacagtgactgtgcagagaacatgtacattgacatgatg
ctgtggaggcatgctcggcgacttctggaagagatccgtcttaaagaccttggtggtttt
gctgcacagctagggtttgagcttattggctggctatgtaaagagcgcacacgtgctgcc
cgtgttgaagactttgtcacttccttgaaaaagcttcataaggatttcctttggcccttc
ccggtgattccagtcgcatcaattaattctccctttaaaaatggaaagttcaggacagtc
ggtgaacagttcttgaaatcccagtcagctgatggcttcctgaacatggatgtagagact
cccattcccagtgctgttcgtagtcatagttggatgggcagcttgggtacatctcagaga
gagatggacagtacctcatcccacagtccccatacccaagatgctttcctgtcccctcta
atgaataaagcagatgaatgcagtattggctcggcaactgacctgacagagacgagctcc
atggttgatggggactggacaatggtagatgagaatttctctaccttgagtttgacacag
tcagagcttgagcacatttcaatggaacttgctaataaaggacctcacaagtcacaagtt
cagctgcgatacttgctacatgtatttatggaagcaggctgcctggaatggtgtgtgata
attggcctgatacttagggaatcttcagtcataaaccaggtaataaacctgctgcagtgt
ccagaggtggcagaagagatgttgcaaggaatacaaagtgggctgcaagctgtggatgtt
tgggctaccacagactgccctgggtacaaaccatttcttaacatcattaggcctccactg
caaaaactcagtgcaacgactgtggagcaggtacagactgaagccttccaaccaactatc
cctatcaaatttacagagcaatccagtccctgcattgaagaaagtcgcatctctacaagt
cacagtatcagccctcaaagtgacaccagcagtgttagtggcagccggcatgaagaggac
ttttcaagacaagaaaaagatgaaacttcccaagaagggaactatgattgtattgtttcc
tag
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