Xenopus tropicalis (tropical clawed frog): 100170638
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Entry
100170638 CDS
T01011
Symbol
brf1
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
100170638 (brf1)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
100170638 (brf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
RB_B
Motif
Other DBs
NCBI-GeneID:
100170638
NCBI-ProteinID:
NP_001182550
Xenbase:
XB-GENE-946065
UniProt:
F7BB98
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All DBs
Position
8:complement(100688389..100854064)
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AA seq
665 aa
AA seq
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MSSRVCKNCGCTDIDVDAARGDAVCTGCGSVLEDNIIVSEVQFVEGAGGISSAVGQFVSS
ECSGKTPSLGEGFYTSVGKESRAQTLQNGKRQIHNLGVQLQLNKHCLDTAFNFFKMAVSK
HLTRGRKMTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPA
IDPCLYIPRFAHLLEFGDKNHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVASRMH
DFRRTIKEVIRVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEQECDPPSFTAGQRK
VKIQQLEQELAKKLDEVEGEISSYQDEIENELESSRPKPKGIYASYAKNGSEDNTSSILA
EEDDDEDLEAAANHLNKDFYSELANDTSKGICYEHTVKPLPIESLLGPLPTAASLGITDS
IKECIAINEQEKSDNAGDGELDLNGIDDNEIDRYILNEKEAEIKKEMWMKENEDYLREQK
EKEARIAKEKELGIYKEQKPRKPSKRRAPIQASTAGEAIEKMLEQKKISSKINYDVLRDL
NSKGSSTPKHDKNDMEEGITSNQLSRRKSAASKILSNPVSNAGKRIRPLVSTQPSKKVAF
EQEVRNELESTPPKIVVESGPVTYNHEDDAAAAEEEEEEEEEHCVSALQLMGGNDYGCDM
DEDDY
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgggtgtgtaagaactgcggttgtaccgatatagacgtagatgcggcccgc
ggggatgcggtgtgtacgggctgcggctcggtgctggaggataatatcatcgtgtctgag
gtgcagttcgtggagggcgcaggcgggatctcctcggcagttggacagttcgtctcctcg
gaatgttctggtaaaactccatcactgggagaaggattttacaccagcgtgggaaaggag
tcccgtgcacaaactctacagaatgggaagcgtcagattcacaacttgggagtgcagtta
cagctaaataagcattgcctggacactgccttcaacttctttaaaatggctgtcagcaag
caccttacccgtggtaggaagatgacccatgtcatagccgcctgcttgtacttggtctgt
aggacagaaggaactccccatatgttacttgatctcagtgaccttcttcaggtgaatgtg
tatgtccttggcaagacctttcttctcttagccagagaactctgcatcaatgctcctgct
atagacccctgcttatatattcctcgatttgcacacttgctggagtttggcgataaaaat
catgaagtatcaatgactgcactgaggttggtccaaaggatgaaaagagattggatgcac
actgggcgccgcccatctggactctgcggagctgcactgcttgttgcatccagaatgcat
gatttccggcggaccattaaagaggtcatcagggtggtaaaggtgtgtgagtctacactg
aggaaaagattaacagaatttgaagatactccaacaagtcaactgacaattgatgaattt
atgaagattgatttggaacaagagtgtgatcctccttcctttactgctggtcaaaggaag
gttaaaatacaacagcttgagcaagagttggcaaaaaaacttgatgaagtagaaggggaa
atatcaagttatcaagatgaaatagagaatgagctggagagtagcagaccaaagcccaaa
ggaatatatgcttcatatgctaaaaatggttcagaagacaacacttctagcatacttgca
gaagaagatgatgatgaagacctggaagcagccgctaatcacttaaacaaggatttttac
agtgaacttgctaatgatacatctaaagggatttgttatgagcacaccgtgaagccactt
cctatagaatctctactaggccctctccccactgctgcaagcttggggattacagactcc
atcaaggaatgcatagcaataaatgagcaagagaaaagtgacaatgcaggagacggcgaa
ctcgaccttaatggaattgatgacaatgaaatagacaggtatattctcaatgagaaggaa
gcagaaataaagaaagagatgtggatgaaagagaatgaggactaccttcgagaacaaaag
gaaaaggaagcgcgtatagctaaagagaaggagcttggtatttacaaagagcaaaagcca
aggaaaccttccaagcggagggctccaatccaagccagcactgctggggaggcaattgaa
aagatgctggagcagaagaaaatctccagtaaaattaactatgatgtactccgggacctc
aacagcaaagggagcagtactccaaagcacgataagaacgatatggaggaagggatcact
agcaaccaactctcccgcaggaaatctgctgccagtaaaattctgtccaatcccgtcagc
aacgccggcaaaaggataagaccactggtttcaacgcagccatctaagaaagtagcattt
gaacaggaagtcagaaatgaacttgagtcaacacccccaaagatagtagtggagagtggg
ccagtcacatacaatcacgaggatgatgccgccgccgccgaagaagaagaggaggaagag
gaagaacactgtgtgagcgcacttcagttaatggggggaaatgattacggctgtgatatg
gatgaggatgattactga
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