Xenopus tropicalis (tropical clawed frog): 100170640
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Entry
100170640 CDS
T01011
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03430
Mismatch repair
xtr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100170640 (mlh1)
03460 Fanconi anemia pathway
100170640 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtr03400
]
100170640 (mlh1)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100170640 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Hfx_Cass5
Nrap
Motif
Other DBs
NCBI-GeneID:
100170640
NCBI-ProteinID:
XP_002933455
Xenbase:
XB-GENE-5838711
UniProt:
A0A8J0QND8
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Position
6:60755242..60791000
Genome browser
AA seq
749 aa
AA seq
DB search
MAGVIRRLEETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVTVKDGGMKLIQIQD
NGTGIRKEDLDIVCERFTTSKLQSFEDLSNISTYGFRGEALASISHVAHVTITTKTADGK
CAYRASYADGKLKTPPKPCAGNQGTQISVEDLFYNISTRRKALKSPSEEHARIVEVVSRY
AIHNSGISFSVKKQGETMADVRTLSNATTVDNIRTVFGNAVSRELIEVGCEEEKLAFKMK
GYVTNANYSMKKCIFLLFINARLVESTALKKAIETVYAAYLPKNTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSIIERVQQHIESKLLGSNSSRMYFTQTLLPGNSVCASNVTKPP
PASSTSQKSSEKVYAHQMVRTDSREQKLDAFLQPVNRPPLILSDCQAPDNAEGQKDSRLP
SEDTEMAETSDLEMLDVLEATANPDNSVLKQKETDDSTNIVQPRKRPRKESDVEMVEEDE
SVKSLTAASMPRRRIINLTSILSLQKKIEECGHSSLQDMLRNHSFVGCVTPQWALAQFQT
KLYLLNTTKLSQELFYQILIYDFGNFGIMKLSEPAPLYDLAMLALDSTESGWTEEDGPKE
GLAEYIVQFLKKKAEMMADYFSLEIDQEGNLIGLPILLDNYIPPMEGLPLFILRLATEVN
WDDEKECFESFSKECSMFYSIRKQYILEESSSNADNESLTGSSSWRWTTEHILYKAFRTH
LLPPKPFSEDGSILQLANLPDLYKVFERC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggttattaggcgtctggaagagacagtggttaatcgtatagctgctggggag
gttatccagaggccggccaatgcaatcaaggaaatgattgaaaactgtttagatgccaaa
tcgacctccatccaggtgacagtgaaggatggaggcatgaaacttatccagattcaggac
aacggaactgggattaggaaggaagacttagacatagtgtgtgagagatttactacaagc
aagctacagtcatttgaagatttgtccaatatttccacttacggatttcgaggagaagca
ttggccagcataagtcacgtggctcatgttacaataaccacaaaaacagcagatggaaaa
tgtgcatacagagcaagctatgcagatggcaagctaaaaacacctccaaaaccttgtgct
ggaaaccaaggaacccagatttcggttgaagatcttttttataatatttcaacaaggcga
aaagctctaaagagtccaagtgaagagcatgcaagaatagtagaagttgtcagcaggtat
gctatccataactctggaattagtttttcagtcaaaaagcaaggtgaaactatggcagat
gtgagaacattatctaatgcaactacagtagacaatatcagaactgtttttggaaatgca
gtgagcagggaactcatagaagtaggatgtgaagaggagaaactggcatttaaaatgaaa
ggttacgtgactaatgccaactattctatgaaaaagtgcattttcttactcttcattaat
gcaagactagttgaatccacagcattaaagaaagcaatagaaactgtgtatgctgcttac
ttaccaaaaaatacacatcctttcctgtacttaagcctagaaatagctcctcaaaatgtt
gatgtgaatgtgcaccctacaaagcatgaggtacattttctccatgaagatagcatcata
gagagggtgcagcagcacattgaaagtaaactgctgggatcaaactcttccagaatgtac
ttcacacagacattattacctggaaattctgtctgtgcaagtaatgttactaaaccaccg
ccagcttcctctacatctcagaagtccagtgaaaaggtttatgctcaccagatggtacgt
acagactccagggagcagaagttggatgcttttcttcagcctgtgaacagacctccgctt
attctctcagactgccaagctcctgacaatgctgaaggtcagaaagatagcagacttccc
tcagaggatacagagatggcagaaacaagtgatctggaaatgcttgatgttcttgaggct
accgccaacccagacaattctgtgctgaaacaaaaagaaactgatgactccacaaacatt
gtacagcccaggaaacgaccacgaaaagaatctgatgtggaaatggttgaggaagatgag
tcggttaagtctttgacagctgcctccatgccaagaagaagaattataaatttgacaagt
atactgagtctgcagaagaagattgaagagtgtggtcactcaagtcttcaggacatgctg
cgcaatcattcctttgttggctgtgtcactccccagtgggctttagctcagtttcagaca
aagttatatcttctaaacaccactaaactcagccaagaattattttaccaaatactcatt
tatgactttggaaacttcggcataatgaaattatctgagccagctccactgtatgacttg
gcaatgttagccttggatagtacagagagtgggtggacagaagaagatggccctaaagaa
ggacttgctgaatatattgtacagtttttaaagaagaaagcagagatgatggcagactac
ttctcacttgaaattgaccaggaaggtaaccttataggattacctatactgctagacaac
tacatccctcctatggaaggattgccattgtttattttgcgcctagccacagaggtcaat
tgggatgatgagaaggagtgctttgaaagttttagcaaggaatgttccatgttttactct
attcggaagcagtatatattagaagaatcttccagtaatgcggacaatgaatccttaaca
gggtcttcctcttggcgctggactacagaacacattctatacaaagccttcagaactcac
ctgctacctccaaagcccttttcagaagatggaagcatccttcagcttgcaaatctccct
gacttatataaagtgtttgaaagatgctag
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