Xenopus tropicalis (tropical clawed frog): 100188921
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Entry
100188921 CDS
T01011
Symbol
lrrc4c
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100188921 (lrrc4c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100188921 (lrrc4c)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
NGL family
100188921 (lrrc4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
LRR_9
V-set
Ig_2
LRRNT
LRR_LRWD1
DUF7617
Sp38
LRRCT
Syndecan
Motif
Other DBs
NCBI-GeneID:
100188921
NCBI-ProteinID:
XP_002938986
Xenbase:
XB-GENE-5772259
UniProt:
F6ZMC6
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Position
4:complement(8660458..9311464)
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AA seq
639 aa
AA seq
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MLNKMKLHPPQMMIGPRFNRALFDPLFIVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICTRRNLREVPDGISTNTRQLNLHENQIQIIKVDSFKHLRHLEVLQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
EMKRLSYISEGAFEGLSNLKYLNLGMCNLRDIPNLTPLVKLDELDLSGNHLSVLRPGSFQ
GLTHLQKLWIMHSQIQVIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHNLQRIQLHH
NPWNCNCDILWLSWWLKEIVTTGSTCCARCSTPPSLKGTHIAELDHNYFTCYAPVIVEPP
ADLNVTEGMAAELKCRASTSLTYVSWITPNGTIMTHGSYKVRISVLNDGTLNFTNVTVRD
TGLYTCIVSNSAGNTTASATLNVTASDTGYTYFSTVTVETMEPSQDEARTTETHVGPTPV
IDWETTNATTSLMPQSTRFTEKTVTVPVTDANNGMPGIDEVMKTTKIIIGCFVAITLMAA
VMLVIFYKMRKQHHRKNHHAPTRTVEIINVDDELTADTPIESHLPMPAIEHEHLNHYNSY
KSPFNHTTTVNTINSIHSSVHEPLLIRANSKDNVQETQI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaaattacatccaccgcagatgatgataggtcctaggttcaacagg
gccctatttgaccccctttttattgtgctgttggctcttcagcttcttgtggtggcgggt
ttagtcagggctcagacctgcccttccgtatgttcttgtagcaaccagttcagcaaggtc
atttgcacaagaagaaacctccgagaggtcccagacggcatctccaccaacacaagacaa
ctgaaccttcatgagaatcagatccagataatcaaagtcgacagttttaaacacttgaga
catctagaagttttacagttgagcagaaaccacattaggacgattgagattggtgctttc
aatggcttggcgaatctgaatacattggagctctttgacaatcgtttgaccactattcct
aatggagcttttgaatatttgtcaaaactgaaagagctttggctgagaaacaatcccatt
gaaagcattccatcctatgcttttaatcgcatcccttctctccgtaggctggatttggga
gagatgaaaagattgtcatatatttcagaaggggcatttgaaggcctttcaaatctcaaa
tatttgaaccttggaatgtgcaacctaagagatatccccaatcttactcctcttgttaaa
ctagacgagttggatctttctgggaaccatttgtcggtccttcgacctggatctttccaa
ggattaacccatcttcaaaaattgtggattatgcattcccaaattcaggtgatcgaaagg
aatgcctttgatgatctccagtcgctggtggaacttaatttggcacataataatctaact
ttactgcctcatgatcttttcacacctcttcacaacctacaaaggattcaattgcatcac
aacccctggaactgcaactgtgacatcctttggctcagttggtggctcaaagagatagtc
accacgggcagcacatgttgtgctcggtgtagcactcccccgagcttaaaaggaactcac
attgcagagctggaccataactattttacttgctacgctcctgtaattgtagagccccct
gctgacctgaatgtcacggaaggcatggcggctgagcttaaatgtagggcatcgacatcg
ttgacttatgttagttggattactccaaatggaactattatgacccatggatcttataaa
gtacgtatttccgtgttgaacgacggcacgctgaactttacaaatgtaacagtgagggac
acgggcttgtacacctgtatagtaagcaattccgccggtaacaccactgcctcagcgaca
ctgaatgtgacggcgtccgacactggttacacttacttttccaccgtgaccgtagagact
atggaaccatctcaggatgaggcaaggaccacagaaactcacgtcggcccaaccccggtc
attgactgggaaaccaccaatgcaaccacctctctaatgcctcagagcacaaggttcaca
gaaaaaaccgtcaccgtccccgtcacagatgcaaacaacgggatgccaggtatcgacgag
gtcatgaaaaccaccaaaataatcattggctgttttgtggccattaccctaatggcggcg
gtgatgctggttattttctacaagatgagaaagcagcaccatcggaagaaccatcacgcc
cctacgcggactgttgaaattatcaacgtggatgacgaactcacggccgacacccccatt
gaaagccacttgcccatgccggcgatagaacacgagcatttaaaccattataactcttat
aagtctccttttaatcacacgacgacggtgaacacaataaattcaatacacagctctgtg
catgaacctttattgattcgagcaaactctaaagacaatgtgcaggaaacgcagatctaa
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