Xenopus tropicalis (tropical clawed frog): 100192376
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Entry
100192376 CDS
T01011
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100192376 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100192376 (chd8)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100192376 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
HTH_Hrp3
MUN
Chromo_MIT1
CHDCT2
SWI2_SNF2
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
100192376
NCBI-ProteinID:
NP_001131089
Xenbase:
XB-GENE-966847
UniProt:
B5DE69
LinkDB
All DBs
Position
1:142011237..142062359
Genome browser
AA seq
2184 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTGDSFGRDGPDTIDDALGLGNVLGPLEPITDRVGLPGADV
GNNEVKQQTESQVLPDNPALMSATEIMQPIQLPTNQETLNQGNPFMGASNAGAPKIMILK
APAGMTVGACPVTQIQTLTPHQAANGGKVAFAKVLTGTPLRPGVSIVSGNTVLAKMPSTG
VAGQVGAVRPVRQLLLQPVRASAAPGSSESNTGIKPAITLTSAPQQGDPKRITLVLQQPS
QVGATAQQGQRHVVLGGLPGKIVLQGNQLAALTQAKTPQGQPAKVVTIQLQVQQQPGAAG
QTPQKFQIVQQAPGGVAIAPSGQHTHMLNQQGVQRLSVPLKVVLQPQAGSSQGTAQGLSV
VKVLNASEVANLTASQTVVKTSTGGGESRKLDSQKKQEKANRIVAEAIARARARGEQNIP
RVLNEDELPSVNPEDDDGSRRKRKKKKGETSDRSKDEKPKKVKGSGSLRSRSKGKPSTIT
PIVGKKRKRNPSSDNSDAEIMASQASPAEDEDSVQKRRSNRQVKRKKYTEDLDIKITDDE
DDEEVDVTGPVKTEPVLLPEPMPLPDSEAVPSMQFFVENPSEEDAAIVDKILSMRLAKKE
LPTGEYVEVEEYFVKYKNYSYLHCEWATIEQLERDKRIHQKLKRFKTKMTQMQHFLQEDE
ESFNPDYVEVDRILDESHSTDKDNGEPVVYYLVKWCSLPYEDSTWELKEDVDDGKIEEFK
RIEARQPNLKRVARPAATSWKKLELSREYQNGNQLREYQLEGVNWLLFNWYNRQNCILAD
EMGLGKTIQSITFLQEVYNVGIRGPFLVIAPLSTITNWEREFGSWTQMNTIVYHGSLASR
QMIQQYEMYCKDSKGRLIPGAYKFDALITTFEMVLSDCPELREIEWRCVIIDEAHRLKNR
NCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFGDLKTEE
QVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGA
SQSNTPNLLNTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDFHVQAMVRSSGKLV
LIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFS
RPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYR
LITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNHLSGPIQQFTKKEIEDLLRKGAYAAI
MDEDDEGSKFCEEDIDQILLRRTTTITIESEGKGSTFSKASFVASENRTDISLDDPNFWQ
KWAKKADLDLDLLSSKNTLVIDTPRIRKQTRHFTNKDDDMVEFSDLESDDDDRPKARRQD
RKHGYGRTDCFRVEKHLLVYGWGRWRDILTHGRFKRGMNERDVEKICRAILVYCLLHYRG
DENIKSFIWDLITPAENGKTKQLQNHSGLSIPVPRGRKGKKVKSQSSFDIHKADWIHKYN
PDTLFQDEGYKKHLKHQCNKVLLRVRMLYFLRQEVIGNQAMKVLSGVEARQIDIWFPQVD
QVEVPSRWWDREADKSLLIGVFKHGYEKYNTMRADPALCFLEKVGGPDEQAIAAEHHAQD
FSELPDGGDFDRDIEDPEYKPLHAQKDPEDEIDSLMMDEEISVVDGEEATAMPSGMLWPP
GSALTARLRRLITAYQRSYKREQLKLEAEERGDKRRKRCEAAFKLKEIARREKQQRWTRR
EACDFFRVLSSFGVEYDPDTQLYDWQRFRGLARLDKKTDESLLKYFHGFVAMCRQVCRLP
PAAGDEPPDPSLFIEPISEERASRALFRLDLLRRVREQVLCHPLLIPRLSLCRPDPELPE
WWESGRHDNELLQGAARYGLSRTDLTILQDHAFSFLRCQISYFQSRGISGHSRPSTPTTA
PSVPTERQPSHLASLSSSVSCSPAPRRSSSCSSSSHSSNSEDSSDESNGVKVKPNAGLSH
ARLYDEESRLSLTASPADLTTEDSIQTALETPHSTDWPKDRVLICRIEQVCSAVLTGKWS
SPRRLSDPPSDSPDSLPPTPEQQSPAHFTQIRPAPDPKEFTIQIKSEEGLKIKFQKHKFM
GNGALDSAPHTQKKKSKKKMDLDMDTRIPVVNQKDGTLLLGEEAPLRCQLPEWLHRNPDF
MVDPRFIAVSGYWIPYINRGKHFL
NT seq
6555 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccctatcatggacctctttgatgatccaaacctatttggccttgactctctc
actggagattcctttggacgggatgggccagacactatagatgatgctctaggcctgggt
aatgtcttgggacctttggagccgataacagacagagttggcctgcctggtgctgatgtt
ggcaataatgaagttaaacaacaaacagagtcacaggttctcccggacaatccagctctt
atgtcagctactgagatcatgcagcccattcaacttcccacaaaccaggaaacactgaac
caaggaaatccctttatgggtgcctcaaatgctggagccccaaaaattatgattctgaaa
gctcctgctggaatgacagttggtgcatgtcctgtaactcagatacaaactctgacacct
caccaagctgctaatggtggcaaggtggcatttgctaaggtgcttacaggaaccccattg
cgtcctggggtctcaattgtatctggaaacactgtccttgccaaaatgccaagcactgga
gttgcagggcaggtaggagcagtgaggcctgtccgtcagctacttcttcaaccagtgcgt
gcctccgcagccccaggaagctccgagagtaatacagggatcaagcctgcaatcacacta
acgtcagcacctcaacagggggaccctaaaagaattactctcgtcctacagcagccttcc
caagttggtgcaactgcacaacaagggcagcgtcatgttgtgctgggtgggcttccagga
aagattgtccttcagggaaaccaactggcagctctcacacaagctaaaacccctcaaggt
cagccagctaaagtagtgactatccagctgcaagtccagcagcagcctggggctgcaggt
cagactcctcaaaagtttcagattgtacaacaagccccaggaggtgtggcaattgctccc
agtgggcaacatacacacatgcttaatcaacaaggagttcagaggctttctgttccactc
aaagttgttctgcaaccacaggctggttcctctcagggtactgcgcagggcctgtcagtt
gtgaaagttctaaatgcaagtgaagttgccaatttgactgcaagtcagactgtggttaaa
acatccactggaggtggtgaatctcgtaagctggacagccagaagaagcaagagaaagct
aaccgtattgtagctgaagctattgccagggcccgagccagaggtgaacagaatattcct
cgggtcctgaatgaggatgagcttcccagtgtgaatcctgaagatgatgatggaagcagg
cggaaaaggaagaagaagaaaggagagactagtgataggtccaaggatgagaaacctaag
aaggtcaaaggtagtggaagcttaaggtctaggagcaaaggcaaaccaagtactatcact
cctattgtgggtaagaaaaggaagagaaacccatcttccgataattctgatgctgagatc
atggcatcacaggcttctcctgcagaggatgaagacagtgtccagaagagacgttcaaat
cgccaggtgaagcgcaagaagtatacagaggatttggatattaaaataacagatgatgaa
gatgatgaggaggtagatgtgacgggacctgtgaaaacagaacctgtgctgcttcctgag
cccatgcctttacctgacagtgaggcagtcccttcaatgcagttcttcgtggagaaccca
agtgaagaagatgctgctattgttgacaaaatactctctatgcgcctagctaaaaaagag
ctgcccactggagagtatgttgaagttgaagagtactttgtcaaatataaaaattattcc
tacctacactgtgaatgggccacaattgagcaactggaaagggacaagcgtattcatcag
aaactgaaaagatttaagacaaagatgacccagatgcagcatttcttgcaagaagatgaa
gaatctttcaatccagactatgtagaggtagatcgaatcctagacgaatctcacagcact
gacaaggacaatggtgaaccggtggtgtattacctagtaaaatggtgctctttaccttat
gaagatagcacatgggagctgaaagaagatgttgatgatggaaagatagaggaattcaaa
cgaatagaggcgaggcagccaaatctcaaacgcgtggcccgcccagctgctacatcatgg
aagaagctggaattgtctcgggagtatcagaatggcaaccagttgagagaataccagctg
gaaggtgttaattggcttctctttaactggtacaataggcaaaactgcattttggcagat
gaaatgggtttggggaagaccatccaatctatcacattcttacaagaagtatataatgtg
ggaatacggggaccttttttagtaattgctccactttccaccatcacgaactgggagaga
gagtttggcagttggactcaaatgaatactattgtgtatcatggcagccttgctagtcgc
caaatgatccagcaatatgagatgtactgtaaggactccaagggtcgtcttattcctggt
gcgtacaagtttgatgctcttattacaacttttgaaatggtgctgtctgattgcccagag
ctgcgtgaaattgagtggcgctgtgtcataattgatgaggctcatcggctcaaaaacaga
aactgcaaactactggacagcctaaagcacatggacttggagcacaaagtccttttaaca
ggcactccattacagaacaccgtggaagagttgttcagtcttttgcatttcctggagcca
acacaattttcctctgaagcagagtttcttaaggactttggagacctgaagacagaggaa
caggtgcagaaattacaggccatcttaaaacctatgatgttgaggcgattaaaggaagat
gttgagaaaaacctggccccgaaacaagaaactataattgaggttgagcttactaacatc
cagaagaagtattaccgagcaatactggagaagaatttttcttttctgaccaaaggagct
agtcaatccaacacacccaacttgctcaataccatgatggaactacgcaaatgctgcaac
cacccatacctcatcactggagcagaagaaaagatcatatctgagttccgagaagcaact
ccagtagttccccctgactttcacgtccaagcaatggtacgctcctctggcaaactggtg
ctaatagataagctgctccctaaactaagggctggaggccacaaagttctcatcttttct
cagatggtacggtgcctggacatcctggaagactatctcattcagagaaggtacctttat
gagcgtattgatggacgtgtccgtggcaacatgcgtcaggcagccattgatagattcagc
cgcccagattctgaccgatttgtgtttctactctgtacacgagctggtgggcttggaatt
aacttgacagctgctgatacttgtattatatttgactcggactggaaccctcaaaatgac
cttcaggctcaagctcgatgtcatcgtattgggcaaagcaaagccgttaaaatttacaga
ctcatcactcgcaactcctatgagagagagatgtttgataaggccagtctcaaactagga
ctagacaaagctgtattgcagtctatgagtggtcgggataatcaccttagtgggcctatt
cagcaattcacaaagaaagaaattgaagacttgctaaggaaaggagcttatgctgcaatc
atggatgaagatgacgaaggctctaaattctgtgaagaagatattgaccaaattttactg
aggcgtaccacgactattaccatagagtcagagggaaagggctcaaccttctccaaggca
agttttgttgcttctgagaacaggactgatatatccctagatgatcctaatttctggcaa
aagtgggccaagaaagcagacttagacttggatcttcttagcagcaagaatacactggtt
attgataccccacgtatcaggaagcaaacacggcactttactaacaaagatgatgacatg
gttgagttctcagatttggagagtgatgatgatgatcgccccaaagctcggcgtcaagac
cgcaagcatggatatggacgtacagattgcttccgtgtggagaagcatttgcttgtttat
ggatggggtcgctggcgagatatccttactcatggtcgtttcaagcgtggtatgaatgag
cgtgacgtggagaaaatatgtagagccatactggtttattgtcttttgcactaccgggga
gatgaaaacataaagagctttatctgggatctaattacaccagctgagaatggcaaaact
aagcagctacagaaccactctggattgtctattcctgtcccccgtggtcgtaaggggaaa
aaagtgaaatcccaaagcagctttgacatacataaagccgattggatacataagtacaac
ccagataccttgttccaagatgaagggtacaagaaacatctcaagcatcaatgtaacaag
gtgctgcttcgcgttcgtatgttatattttcttcgtcaggaagttattggaaaccaggca
atgaaagttttaagtggtgtagaggccaggcaaattgacatctggttcccacaggtggac
caggttgaagttccctcgcgctggtgggacagagaagctgataaatctcttcttatcggg
gtctttaaacatggttatgagaagtataacaccatgcgagctgaccctgcactctgtttt
ttggagaaggtggggggaccagatgaacaggctattgcagctgagcaccatgctcaagac
ttttctgaactccctgatggtggggactttgatcgagacatagaagatccagaatacaag
ccacttcatgcacagaaagatcctgaggatgagatcgactctttaatgatggatgaagaa
atctctgttgttgacggtgaagaagcaacagcaatgcccagtggtatgttatggccacct
ggctctgctctcacagctcgtctacggcgtctaattactgcctaccaacgcagctacaaa
agagaacaactaaaattggaggctgaagagcgtggggacaaacgtagaaaacgatgtgag
gcagcctttaaactgaaagaaattgcccgtagggagaaacagcaaaggtggacccgaagg
gaggcatgtgacttttttcgtgtgctgtccagctttggtgtcgagtatgaccccgatact
caactgtatgactggcagaggttccgtggtctggcaagactggacaagaagacagatgag
tcactgctcaaatacttccatggatttgtggcaatgtgccgccaggtttgccgcttaccc
cctgctgccggagacgagccaccagatccatctctcttcattgagccaatttcagaagag
cgagcatctcgcgccctgtttcgcttggatcttcttcgtagggtgcgtgagcaagtactt
tgtcatcctttgcttattcctcgtttgtcactgtgccggccagacccagaactcccagaa
tggtgggagagtggacgtcatgacaatgagcttcttcagggagcagcacgttatggtctg
agccgtacagacctcactatactgcaggaccatgcattttcttttttgcggtgtcagatc
agttatttccagtcaaggggaatatctggccattctcgcccttctactccaactactgcc
ccttcagtgcctactgaacgtcagccttctcatctagcctccctttcctcatctgtcagc
tgttctcctgctccacgcagatcctcttcctgctcatcatcatctcactcatcaaactct
gaggattcttcagatgaaagcaatggtgtaaaagtaaaacctaatgcaggtctttcgcac
gctcgactgtatgatgaggagagccggctttctcttactgcctcccctgcagatctcact
acagaggacagtattcagacagcgctggagaccccgcacagtacagactggccaaaggac
cgtgtccttatctgcagaattgagcaagtatgcagtgccgttcttactggcaaatggtcc
tcaccacgacgactgtcagatccaccaagtgacagccctgatagcttgcctccaacccca
gagcagcagagtccagcccacttcacacagataagacctgcaccggaccccaaagagttt
accattcaaataaaaagtgaagaaggcctgaagattaaatttcagaagcacaaatttatg
ggtaatggagctcttgattctgcacctcatacccagaagaaaaagagcaagaaaaagatg
gatcttgacatggacacacgaattcccgttgtaaaccagaaggatgggaccttgttgtta
ggggaagaagcccctttacgctgccagctgcccgagtggttacacagaaatcctgacttc
atggttgacccacgctttattgcggtttctggatattggatcccatatataaatagagga
aaacatttcctgtag
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integrated database retrieval system
