Xenopus tropicalis (tropical clawed frog): 100192377
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Entry
100192377 CDS
T01011
Symbol
tbc1d9
Name
(RefSeq) TBC1 domain family member 9
KO
K19951
TBC1 domain family member 8/9
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100192377 (tbc1d9)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100192377 (tbc1d9)
Endosome - Golgi transport
Rab GTPases and associated proteins
100192377 (tbc1d9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
100192377
NCBI-ProteinID:
NP_001131090
Xenbase:
XB-GENE-5992769
UniProt:
B4F6P9
LinkDB
All DBs
Position
1:60409939..60459616
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AA seq
1232 aa
AA seq
DB search
MWVNPEEVLLANALWVTERANPYFILQRRKGHGTRGSGGLAGLLVGTLDVVLDSSARVAP
YRILYQTPDSLVYWTIACGGCRREVTEHWEWLEVNLLQTLSIFENENDITTFVKGKIQGI
IAEYNKINGIKEDDDTDKFKEAIVKFHKLFGMPEEEKLVNYYSCSYWKGRVPRQGWMYLS
INHLCFYSFLLGKEAKLVIRWVDITQLEKTATLLLPDMIKVNTRSSEHFFSVFLNIGETF
KLMEQLANIAMRQLLDNEGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRALFRLP
KDEKLDGHTDCTLWTPFSKRHILGQMFVSTNYICFTSKEENLCSLIIPLREVTIVEKADS
SSVLPSPLSISTRNRMTFLFANLKDRDFLVQRISDFLQQTTLKMYFDKDISGSDNSLDEE
VYSRASVFVSCSPKQSVGNETDGERQFNLNCNSAPTATQTLMTMYRRRSPEEFNPKLAKE
FLKEQAWKTHFTEYGQGVCMYRTEKTRDLVLKGIPEVMRGELWLLFSGAINEMATHPGYY
EELVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEIGISALRRVLTAYAFRNPNIGYCQA
MNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQLYD
CMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLEANVDKLL
NCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLITDDSEPYPEVDIFKLISTSYQKFG
TIRADLIEQMRFKQRLKVIQTLEDTTKRNVVRTIVTDTAFTINELEELYALFKAEHLTSC
YWGGNSSAVERHDPSLPYLEQYRIDFQQFKGMFCLLFPWASGAHTDVMAFRLFRLLDENG
DCLINFREFVSSLSAACHGDLTEKLKLLYRMHTLPDPSPEQEEPDSAFEATQYFFEDITP
ECSQVKKMTSQDSRLYLRMWAQENRSKQKVDKELPRLNQGQFIELCKTLYNMFSEDPCEQ
ELYHATAAVTSLLLEIGEVGKLFCSQTMEDIPNQSCKESESRTQETKVSQTYNYEHEGLF
CDRPVSRGSVGDLNSDQMEEVKLEDSSPRDNGACSSMLISDDDTKDDSSMSSYSVLSAGS
HEDDKLQCEDIGEDTVLVRTQQKSSLPSSTSLDRDWAVTFEQFLASLLMEPALVRYFDKP
VSMMAKITNAKNIRMMGKAMPSSSDYDISISG
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgaatccagaggaggtgttactggcaaacgccctgtgggtcacggagagggct
aatccctatttcatcctgcagagaagaaagggccatgggacgagaggaagtgggggactg
gcagggttgcttgtgggaacgctggatgttgtcttggattctagtgcaagggttgcacct
tatcgcatcctgtatcagacacctgactctctggtatattggaccattgcgtgtggaggt
tgccgaagggaggtaacagagcactgggagtggctggaagttaatttgctgcagaccctc
tctatatttgaaaatgaaaatgacatcacaacatttgtgaaaggaaaaatccagggtatc
attgcagagtataataaaataaatggtataaaagaagatgatgacacagacaagttcaag
gaggctatagtcaagttccacaagctgtttgggatgccagaagaggagaagttagtaaac
tattactcatgcagctactggaaaggcagggttcctcgacaaggatggatgtatctcagc
atcaaccacctttgtttctactcctttctgctggggaaagaagcaaaactggtgatccga
tgggttgatataacacagctggaaaagacagccacgcttctgctccctgacatgattaaa
gtcaacacacgctccagtgagcatttcttttctgtgttcctcaacattggtgagacattc
aaactgatggagcagcttgccaatatagccatgagacagcttcttgataatgagggtttt
gagcaggacagatccctcccaaaactgaaaaagaagtctccaaaaaaagtgtctgcctta
aaacgtgatttggatgccagagcaaagagtgagagataccgggcactgttccgcctacca
aaagatgagaagctggatggacacactgattgcacactctggacaccatttagtaaaagg
cacattctggggcagatgtttgtttccacaaattatatttgcttcactagtaaagaagag
aacttgtgcagcctgatcattccattgcgagaggtgacaatagtagaaaaggctgacagc
tccagtgtgttgccaagccctctttctattagcaccagaaacagaatgactttcctgttt
gccaacctaaaggaccgagactttcttgtgcagaggatatctgacttcctgcagcagact
actctcaaaatgtattttgataaagacatttctggaagcgacaacagccttgatgaagag
gtttactccagggccagcgtatttgtttcctgcagccctaagcaaagcgttggcaatgaa
acagatggtgagcgccaattcaacctaaactgcaatagtgcgccaactgcaacccagaca
ctaatgaccatgtatcgcaggaggtcgccggaagagttcaatcctaagctggccaaggag
tttctgaaggagcaagcctggaagacacactttacagaatatggccaaggggtgtgcatg
tatcgtacagagaaaacacgcgaccttgttctgaaaggcatcccagaggtcatgcgaggg
gagctatggctgctcttttcaggagccataaatgagatggccacacaccctgggtattat
gaggagttggttgagaagtccatgggcaaatataatcttgctacagaggaaatcgaacga
gacctgcaccgttctctcccagagcatcctgcctttcagaatgaaatagggatatcggca
ctgcggagagtgctcactgcttatgccttcaggaacccaaacattggttactgccaagct
atgaatatagtgacatcagtcctccttctatatgccaaagaagaggaagccttttggttg
cttgtagctctgtgtgaacgcatgcttcccgattactataacaccagggtggttggtgct
cttgtagaccaaggagtatttgaagagttggccagggattatgtgccacagttgtacgac
tgcatgcaggacctgggtgtgatctccaccatctcactctcatggttcctcaccctgttc
ctcagtgtaatgccctttgaaagtgcagttgtggtcgtagattgtttcttctatgaaggc
atcaaggtgatattccagctagcccttgctgttctagaggcaaatgtggacaagcttctg
aactgtaaagacgatggagaagcaatgactgttttgggcaggtatttagatagcgtgact
aacaaagacagcaccttgccaccaatcccgcacctccattctctcatcacagacgattct
gagccctatccagaggtggacatctttaaactgatcagcacttcctatcagaaatttgga
acaataagagccgacttgatagaacagatgagattcaaacaaaggcttaaagtgatacag
actcttgaggacactacgaaaagaaatgtggtccgaacaatagtgactgacactgcattt
actatcaatgaattggaggaattgtatgctctcttcaaggcggagcacctaactagttgt
tactggggaggcaatagcagcgcagtggagcggcatgatcccagcctaccgtacttggaa
cagtatcgcatagacttccagcaattcaagggcatgttctgcttgctctttccatgggct
agtggagcacacaccgatgtgatggccttccggctctttcgcctgctggatgaaaatgga
gactgcttaattaacttccgagaatttgtctctagcctgagtgctgcatgtcacggtgat
ctcacagagaaactgaagcttctgtacaggatgcatacattgcctgatccgtcccctgaa
caggaagagcctgactctgcgtttgaggccactcagtacttttttgaagatattacacca
gagtgcagccaagtgaaaaagatgacaagccaggacagtcggctctacctccgtatgtgg
gcacaagaaaacagaagtaaacaaaaagttgacaaggaacttcctaggctaaaccagggc
cagttcattgagttgtgcaagacattgtataacatgttcagcgaggacccatgtgagcaa
gaactctaccatgccactgctgcagtcacaagcttattgctggagattggtgaagtggga
aagctattctgcagccaaacaatggaggacattcctaatcagagctgcaaggaaagtgaa
agcagaactcaagaaacaaaggtttcccagacatacaattacgaacacgaggggctcttt
tgcgacagacctgtttccagaggcagtgtcggagacctcaactcagatcagatggaggaa
gtgaagctggaagattcctctcccagagacaatggggcttgttcatccatgcttatatca
gatgatgacactaaagacgacagctctatgtcttcatattctgtgctgagtgctggatcc
catgaagatgataaattgcaatgtgaggatattggtgaggacactgttttagtgcgcacc
cagcagaagtcttctttgcccagcagtaccagtttggacagggattgggctgttacattt
gagcagtttcttgcttctctcttgatggaacctgcacttgtaagatactttgacaagcca
gtgtccatgatggctaaaattaccaatgcaaagaacattcggatgatgggaaaagccatg
ccttcctcaagtgattatgacatttctatctctggataa
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integrated database retrieval system
