Xenopus tropicalis (tropical clawed frog): 100216008
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Entry
100216008 CDS
T01011
Symbol
ift27
Name
(RefSeq) intraflagellar transport protein 27 homolog
KO
K07934
intraflagellar transport protein 27
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100216008 (ift27)
04031 GTP-binding proteins [BR:
xtr04031
]
100216008 (ift27)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
100216008 (ift27)
GTP-binding proteins [BR:
xtr04031
]
Small (monomeric) G-proteins
Rho Family
Others
100216008 (ift27)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
ATP_bind_1
GTP_EFTU
CLN5
TniB
Arf
MMR_HSR1
SRPRB
Septin
DUF6974
DD_DDX21-DDX50
Motif
Other DBs
NCBI-GeneID:
100216008
NCBI-ProteinID:
NP_001135473
Xenbase:
XB-GENE-1001555
UniProt:
B1H1F4
LinkDB
All DBs
Position
4:123406401..123424519
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AA seq
186 aa
AA seq
DB search
MVKLSAKCIVAGDTTVGKSTLVQLFRSDGSHFPKNYSMTTSMEVSVKNVQIPDTGDSVEL
FLCDSPGKAIFYEVTEKLWDQPGALCLVFDVTNESSFSSCAKWLQRVRAKTFSPQLPGVL
VGNKTDMAGRRAVERGQAEEWAASNGLEYFETSAKELENFEQPFQALAKAFHHLYQERVE
NFRSLM
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaactttcagccaagtgcattgtagcaggtgacacaactgtggggaaaagtacc
ctggtccaactcttccggagtgatgggagccatttcccaaagaattacagtatgaccact
agcatggaggtttctgtaaaaaacgttcagataccagatactggagatagtgtggagctc
ttcctctgcgacagtcctggcaaagcaatcttttatgaggtgacggagaagctgtgggac
cagccgggtgccctgtgcttggtgtttgatgtcaccaatgagagctcattcagtagctgc
gcaaagtggttgcagagagttagagcgaagacattcagccctcagctcccaggtgttctt
gttgggaacaagacagacatggcaggccgcagagcagtggaaagggggcaggcagaagag
tgggcagcaagcaatggactggagtattttgagacgtctgcgaaagaactggaaaacttt
gagcagccatttcaagcactggcaaaagcttttcatcacctgtaccaggaaagagtggaa
aacttccggagcctgatgtag
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integrated database retrieval system
