Xenopus tropicalis (tropical clawed frog): 100216026
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Entry
100216026 CDS
T01011
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03030
DNA replication
xtr03410
Base excision repair
xtr03420
Nucleotide excision repair
xtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100216026 (rfc2)
03410 Base excision repair
100216026 (rfc2)
03420 Nucleotide excision repair
100216026 (rfc2)
03430 Mismatch repair
100216026 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xtr03032
]
100216026 (rfc2)
03036 Chromosome and associated proteins [BR:
xtr03036
]
100216026 (rfc2)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
100216026 (rfc2)
DNA replication proteins [BR:
xtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100216026 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
100216026 (rfc2)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100216026 (rfc2)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100216026 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
100216026 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_14
AAA_16
Mg_chelatase
AAA_24
Viral_helicase1
AAA_11
Rad17
AAA_assoc_2
RuvB_N
AAA_19
MipZ
nSTAND3
DNAX_ATPase_lid
AAA_28
AAA_5
ABC_tran
AAA_18
AAA_23
AAA_25
AAA_30
MeaB
SLFN-g3_helicase
RNA_helicase
NTPase_1
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
100216026
NCBI-ProteinID:
NP_001135488
Xenbase:
XB-GENE-999114
UniProt:
B4F6H8
LinkDB
All DBs
Position
2:100904755..100912340
Genome browser
AA seq
345 aa
AA seq
DB search
MDVDMVESSAGESGTKTAAQSAKGLAGTYELPWVEKYRPLKLSEIVGNEETVSRLEVFAR
EGNVPNIIIAGPPGTGKTTSILCLARALLGPTMKDAVLELNASNDRGIDVVRNKIKMFAQ
QKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRC
AVLRYTKLTDAQVLARLMDVVEKERVQCTDDGLEAIVFTAQGDMRQALNNLQSTFAGFGF
VNSTNVFKVCDEPHPLLVKEMLQHCVNANIDEAYKVVAHLWKLGYSPEDIIGNIFRVCKT
FQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGKERTKKKKKKK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatatggtagaaagctctgccggtgaatcgggcactaaaacggccgcccag
tctgccaagggcctggccggaacttatgaacttccttgggtagaaaaatacagaccattg
aaactaagtgagatagttggaaatgaagaaactgtcagccgcctagaagtatttgcaaga
gaaggaaatgttccaaatatcataattgcggggcctcctggaacaggtaaaaccaccagt
attttgtgtttggcacgtgcacttctgggccccaccatgaaagatgctgtcttggagctc
aacgcctcaaatgatcgaggcatagatgtggtgagaaacaaaattaaaatgtttgctcag
cagaaggtcacccttcctaaagggcgtcacaaaattattatcttggatgaagctgacagc
atgacagatggagcccagcaagctttgagaagaactatggaaatctattccaagacgaca
cgctttgctctagcatgcaatgcttcagacaagattattgaacccatccagtcccgatgt
gctgtactccgttacaccaaactgacagacgctcaagtccttgcaaggctgatggatgtt
gttgagaaggagagagttcagtgtacagatgatgggcttgaggctatagtgttcactgca
cagggagatatgagacaggcactgaataacctgcagtccactttcgctggatttggcttt
gtaaatagtacaaatgtatttaaggtatgtgatgagccccatccattgttagtgaaagaa
atgttacagcactgcgttaatgccaacattgatgaagcatacaaggttgtggctcatctg
tggaaacttggttattcccctgaagatataataggcaacatatttagggtgtgtaagact
ttccaaatgccagagtatctcaagctggaattcataaaggaaattggatacacacacatg
aaaatagcagaaggagttaactctcttttacagatggccggaaaagaaagaacaaaaaaa
aaaaaaaaaaaaaaataa
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