Xenopus tropicalis (tropical clawed frog): 100216134
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Entry
100216134 CDS
T01011
Symbol
mkrn3
Name
(RefSeq) makorin ring finger protein 3
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100216134 (mkrn3)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100216134 (mkrn3)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100216134 (mkrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
Torus
zf-CCCH_DUS3L
zf-CCCH
zf-RING_2
zf-CCCH_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
zf-RING_UBOX
zf-RING_11
zf-rbx1
IBR_1
RING_XB3-XBAT31
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100216134
NCBI-ProteinID:
NP_001135584
Xenbase:
XB-GENE-5958700
UniProt:
B4F720
LinkDB
All DBs
Position
2:complement(63964450..>63974908)
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AA seq
370 aa
AA seq
DB search
MAAAGREVNTKVRCRAFNRGSCRWGENCRFSHERKFAQICRHFQNGFCVYGEKCSYQHVL
RPPHPPHYLTGRRVSEPCILPHVPEHNEARRGSEPSVPPLKLSVEHKETLPPSGRENWAL
AAEFIPRHSGLIRSVSSPTLQHEASISTLVKRCEGIKSTTSLKNLNSQKCTSDLQYERSR
DVVCGICMDKVYEKQVAERVFGILPNCSHAYCVGCIKRWRKTRDFQNEVIKGCPQCRIKS
SYFIPNKYWVGDSAEKAKLIETFKAKTSKIRCRFFIRGNGHCPFKSECIYLHEIPSRHQQ
RKRREQRRRSASALTYSHLVGMFDEDFTDDEDIDLLHCALTLALIEDNFELGLGFSEEVE
ILWGEGSDSE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctggaagagaggttaatacaaaggttcgttgtagagcttttaaccggggc
tcctgcagatggggtgaaaactgccgattttcccacgaaagaaagttcgctcagatctgc
agacacttccagaatggcttctgtgtctatggcgaaaagtgcagctaccagcatgtattg
cggccacctcaccctcctcactacctgactggacgtagggtctcagaaccttgtatttta
cctcatgttcctgagcataatgaagcacgtcgaggatcagagccctcagttcctccctta
aaactgtctgtggagcataaggaaactttgcccccttcaggtagggagaactgggctctt
gctgcggagttcattcctagacattcaggacttataagatctgtatccagccctacactt
cagcatgaggcctccataagcactttagtgaaacgctgtgaaggaataaaaagcaccact
tctctaaaaaacttgaattctcaaaagtgtacttcagatctacaatatgaacgtagtcgg
gatgtggtttgtgggatttgcatggataaggtgtatgaaaagcaggtagctgaacgagtg
tttgggatattgccaaactgtagtcacgcttattgtgttggttgtatcaaacgctggcgg
aaaacaagagacttccagaatgaggttatcaagggctgtccccagtgccgaataaagtcc
agctattttatccccaacaaatattgggttggagactcggctgaaaaggcgaaacttata
gaaacctttaaagcaaagaccagtaaaatccgctgccgcttttttattcgtgggaatggg
cattgtccctttaaatcagaatgcatttacctccatgaaataccatctaggcatcagcaa
aggaagagacgtgagcaaagaagacggagtgcctctgctttgacctattcacacctggtt
ggaatgtttgatgaagatttcacagatgatgaggacattgatctgctccattgtgctctc
acacttgctctaattgaggataactttgagctaggcttaggtttttctgaggaagttgaa
attctgtggggtgaaggaagtgactcagaataa
DBGET
integrated database retrieval system
