Xenopus tropicalis (tropical clawed frog): 100216156
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Entry
100216156 CDS
T01011
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100216156 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100216156 (abca5)
Transporters [BR:
xtr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
100216156 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
AAA_22
ATP-synt_ab
AAA_15
AAA_30
AAA_25
AAA_16
Dynamin_N
nSTAND3
AAA_5
Vps27_GAT-like
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
100216156
NCBI-ProteinID:
NP_001135599
Xenbase:
XB-GENE-1012902
UniProt:
B4F751
LinkDB
All DBs
Position
10:complement(31509280..31584067)
Genome browser
AA seq
1639 aa
AA seq
DB search
MASEIKDVGLWKQTKTLLYKNYLIKCRTKRDSIQEILYPIIWWLISLLWASMVEQSKHYE
AMPNTLLGGLDGPSSRHLIIGYTPESNITQHIMAMTASECYLTDITFKPYLDEEHMKTAS
SSFEEHFVGVVFDNAMSYKLRFSVYSVPDSTLYMTPREDCHLWNCEASEYFYSTFTYLQA
CIDSSMIKMKTNYSAWEELKSTRAVIMGEQEVIVVDTFYHALMSVFLVMAFSPLGYSVAF
YVVFEKEKKVKEFMKLMGLHDTAFWLPWVLLYTGFILVISLVMAVVATTFFPFSKSNCFL
IFLLYALYGISLVLFALMLAPLFKNSKRAGAIVFLSTLALGAVGIFIVLKEDFPKSFVWF
FSPFCQCTFMIGIAQVLHLEDFQRGAQFTHLKDGPYPLVITFIFLVVDSVMYLLLATYLD
QVLPGEYGLRQSPFFFLKPSYWSKRKKRYGELNESYFDRAVDMSEVIEPVSAELHGKEAI
RICCICKSFRKNNKPRNALQGLTFDIYEGQITALVGHSGTGKTTLMNILCGLCPPTEGFA
TVYGHRVTDIDEIQEASKMTGICQQTDIFFDVLTVEENLHIFASLRGIDEKTKEQEINKI
LFDLDMQALKHNHARTLSIGQKRKLSVAIAVLGNPKVLLLDEPTAGMDSCSRHTVWDLLK
KRKGKHVTVFSTHCMEEADILADRKAVISQGSLKCIGSSLFLKSKWGVGYRLSMDIKKPC
DVDALSSLITQHISGASLMQQSENSLLYSLPLKDVSKFPGLFSALDSGSDLGIITYGVSA
TTLEDVFFKLETEAEIDQTDGIFNQRNLEDEGKWKSMEDIEQGLLELSLESSPCSVTGSA
LWKQQVAAVAKLHFRNLHRESKSFRCVCLCLLFFLVPQLTLYFLGLSYHQSLAPIRLSAD
MYFSHPKQKSHKFLTSLLLQNSTGTNLDELLGNLNSQKIKVDLINGSDYMSASPHNAALN
VFLSGKHYTYEAIFNSSMVHSLPVLINTISNSLLRQLGVNESIEVWNSPFYQDFLHTSYG
LDFYFLIAYLGIMTGMLPYIAMENAYNHKVKAYSQLKMAGLYPSAYWVGQAVVDIPLFFL
MLLFMVGSMLAFKSGIDLHAGTVLAMIFCLIGYVPAVVLLTYVVSFTYKLINDTRQWWSL
IFAVTASISIIIIEAAIFFASSVTVTRLHVFFSIFFPVYPLLGCLTCFIKMSRNLAHSDV
KGLTQLGRLLVAVFAPYVHFLIFFLILRYLEMKYGGRSIRKDPVFRSQTKKTKPWKFAEV
PEDEDEDVKVERARVGEYMAPDCNEKPMVLVSGLHKEQDQTGKTILGKAMRKLVVNNVSF
CVRKGETVGLVGPNGAGKSTLLNMMVGQSELNAGQILMGDPAAGEPGLSPPRFLGYSPQT
NYFWPEIKLQEHLETYGAIKGMGSNVLKEVTRRIVETLDLKDHLQEPAKKLSVGNQRKLS
FALSMLGNPDIVLLEEPSTGMDPKNKQIMWKVIRTTLKGKEQAAVITTHSMEEAEAICDR
VAIMVSGQLRYIGSVQHLKSKFGRYFSLELKLDTRARSQNVEFLHKEILQIFPNASHQES
FSSLMSYKVPKEDVESLSQTFSKLEQVKQMYNIEEYIFSQATLEQVFIELAKEQEEEDNI
ATMNSTLWWERRQEDRVIF
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaaataaaagacgttggactttggaagcaaacaaaaacactgctgtacaag
aattatctcattaaatgcaggacaaagagggacagtatacaggaaatcctttatcccatc
atctggtggttaatatcgctgctgtgggccagcatggtggaacagagcaagcattatgaa
gcaatgcccaatactttgcttggggggctagatggacccagttctcggcatctaatcatt
ggatacaccccagagtccaacataacacagcatataatggcaatgacagcatctgaatgt
tacctcacagatataacattcaagccatatctggatgaagagcatatgaaaacagcgagt
agctcatttgaagagcattttgttggagtggtatttgacaacgccatgtcctacaagctc
agattttcagtgtactctgttcccgattccacactttacatgactccaagagaagattgc
catctgtggaattgtgaagcctctgagtacttttattcgacattcacatatttgcaagcg
tgcattgattcttctatgatcaagatgaaaaccaattattctgcctgggaggaactgaaa
tcgactcgggcagtgatcatgggggagcaggaagtgattgtagttgatacattctatcat
gcactcatgtctgtgtttttggtgatggccttctcaccacttggatactccgttgcattt
tatgttgtgtttgaaaaggaaaagaaggttaaagagttcatgaagctaatgggactccac
gacactgctttttggttaccttgggtcctcctttacacgggcttcattttggttatatct
ctggtgatggcagttgttgcaactaccttcttcccttttagcaaaagcaactgcttttta
atttttctgctatatgctctatatggaatatctctggttttatttgctctcatgctggct
ccgctgttcaagaactctaagcgagcaggtgccatagtgttcctttcaaccctggccttg
ggagcagtgggcattttcattgtactcaaagaagactttccaaaatcatttgtatggttc
ttcagccctttttgccagtgcacattcatgattggtatagcccaggtcttgcacctagaa
gactttcagaggggagcccagttcacacacctaaaggatggtccatatcctcttgtaata
acatttatttttctagtcgtggacagtgtcatgtacctgcttctggctacttatcttgat
caggttctaccaggtgaatatggccttcgacagtctccatttttcttccttaaaccttct
tactggtccaaaaggaaaaagcgatatggggagctgaatgaaagctattttgacagagct
gtagacatgagtgaggtgatagaaccagtgtctgcagaacttcatgggaaagaagctatc
aggatttgctgcatttgcaagtctttcaggaagaacaacaagccaagaaatgccctgcaa
ggtttgacctttgatatatatgaaggtcaaataacagcactggtcggccacagtggcaca
gggaagacaacactcatgaatattttatgtgggctttgcccgccaactgaaggttttgcc
accgtttatggccacagagtgacagacatagacgagattcaagaagccagcaagatgact
ggaatttgccagcaaactgatattttttttgatgttctcacggtggaagagaaccttcac
atttttgcctctctgaggggaatagatgagaagaccaaggagcaagagataaataagatc
ttgttcgatttggatatgcaggccctaaaacacaaccatgccagaactctcagcattggc
cagaagagaaaactatctgtggccattgctgttctgggaaaccccaaggttctacttctg
gatgaacccactgcaggcatggactcatgctctcggcacacagtgtgggacctgctgaag
aaacggaagggaaaacatgttactgtattcagcactcactgcatggaagaggcagatatt
cttgcagatcgtaaagcagtgatttctcaaggatcactcaaatgcattggttcctctctg
tttctgaagagcaaatggggtgtcggctaccgtttaagcatggatatcaaaaaaccctgt
gatgtggatgccctgtcttcactcattacacagcacatttctggagcaagtttaatgcag
cagagtgaaaactcattactctattcattgcccctaaaggatgttagcaaattcccaggt
ttattttctgccctggacagtggatcagacttgggaataatcacatatggagtgtcagcc
accactttggaagatgtcttctttaagctggagacagaggcagaaattgatcaaacagat
gggatcttcaatcaaaggaaccttgaagatgaaggcaaatggaagtccatggaagacata
gagcagggattactggaactgtcattagaatcatcaccctgttcagtgaccggttctgct
ctatggaagcagcaggttgcagcagtagccaagttacatttccgaaatttgcatcgggag
agtaaatctttccgatgtgtgtgcttgtgcctgttattcttcctagtgccccagctgaca
ctgtatttcttaggcctatcctaccaccagtctctagctcctatcagactctctgcagac
atgtacttttcacatccgaagcaaaaaagccacaagtttctcacaagtcttctgctgcag
aactctacaggtacaaaccttgatgagctccttggcaacttgaacagtcagaagataaaa
gttgatttgatcaacggaagtgactacatgtcagcatctccccacaatgcagctctgaat
gtgttcctttctggaaagcattatacatatgaagccattttcaattcctcaatggtgcat
tccctgcctgttctcatcaacacaatcagtaatagtctactgaggcaacttggtgtgaat
gagagcattgaagtctggaatagccccttttaccaggactttttacatacatcctatgga
ttagatttttattttctcatcgcctatctgggaataatgacaggcatgctgccatatatt
gctatggaaaatgcatataaccataaggtaaaagcttattctcagctgaagatggctggc
ctatacccatcagcttattgggtaggacaagctgtagtggacattcctctcttttttctg
atgcttcttttcatggtcggaagcatgcttgcttttaaatctggaattgaccttcatgct
ggaacagtgctggcaatgattttctgcctaattggctatgtccctgcagttgtgctcctg
acgtatgtggtttcctttacctacaaacttattaatgacaccaggcagtggtggtcctta
atctttgcagtgacagcttccatttccatcattattatcgaggcagcaatcttcttcgca
agcagtgttacagttacaaggcttcatgtgttcttctccatatttttccctgtctatcca
cttctaggctgccttacctgctttataaagatgtcaaggaacttggctcacagtgatgta
aagggccttactcagcttggaaggctcttggtggcagtgtttgctccttacgtgcatttt
ctgatcttcttcttaatcctgcggtatctggaaatgaaatatggtgggcgatccataagg
aaagatccagtttttaggagccaaactaaaaaaacgaagccctggaagtttgctgaagtg
cctgaagatgaagatgaagacgtaaaggtggaaagagccagggtgggtgaatacatggcc
ccagactgtaatgagaagccaatggtcttagttagtggcttgcacaaagaacaggatcaa
actggtaaaacgattcttgggaaggcaatgagaaaactggtagtgaataacgtatccttt
tgtgtaaggaaaggagaaacagtggggctggtaggaccaaacggagctggaaaaagtacc
ctacttaacatgatggtgggacagagtgagctgaatgctggccagatattgatgggagat
ccagctgcaggcgagccaggcctcagcccaccaaggtttctgggatattccccacaaaca
aactatttttggccagaaataaagcttcaggagcaccttgagacctatggagccatcaaa
ggcatgggcagcaacgttctgaaagaagtaacaaggagaatcgttgaaaccttggacctg
aaggatcatctacaggaacctgctaagaagctctcagtaggaaaccagagaaagctgagc
tttgcactgagcatgctgggaaatcctgatattgtgcttttagaagaaccctccacaggc
atggatccaaagaacaaacagattatgtggaaggtgattagaactacattaaaaggcaaa
gaacaggcagctgtcattacaacacattccatggaagaggctgaagccatctgtgacaga
gtcgccattatggtatctggccagttaagatacattggctccgtccagcatctgaagagc
aagttcggacgatatttctcccttgaattaaaacttgatacaagagccaggagtcagaat
gtggaatttcttcacaaggagattctgcaaatattcccaaatgcaagtcaccaggagagc
ttttcctctctgatgtcttacaaagttcctaaggaggatgtggagtccctctcccagacg
ttctctaaattggaacaagttaaacaaatgtataatattgaagaatacatcttctctcag
gcaactctagaacaggtattcattgaactagcaaaagaacaagaggaagaagataacatt
gccacaatgaacagcactttgtggtgggagagaaggcaggaggatagagttatcttctga
DBGET
integrated database retrieval system
