Xenopus tropicalis (tropical clawed frog): 100216166
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Entry
100216166 CDS
T01011
Symbol
chmp1a
Name
(RefSeq) charged multivesicular body protein 1a
KO
K12197
charged multivesicular body protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03272
Virion - Hepatitis viruses
xtr04144
Endocytosis
xtr04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100216166 (chmp1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100216166 (chmp1a)
09143 Cell growth and death
04217 Necroptosis
100216166 (chmp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100216166 (chmp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100216166 (chmp1a)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
100216166 (chmp1a)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100216166 (chmp1a)
Exosomal proteins of other body fluids (saliva and urine)
100216166 (chmp1a)
Exosomal proteins of colorectal cancer cells
100216166 (chmp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
Ist1
FliG_N
FCH
GrpE
Motif
Other DBs
NCBI-GeneID:
100216166
NCBI-ProteinID:
NP_001135608
Xenbase:
XB-GENE-5812950
UniProt:
B5DDV9
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All DBs
Position
4:complement(59115679..59160555)
Genome browser
AA seq
196 aa
AA seq
DB search
MDDTLFQLKFTSKQLEKLAKKAEKDSNTEQAKVKKALQQKNVEVARVYAENAIRKKNEGL
NWLRMASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSSMDLQKVSAVMDKFDQQVQ
NLDVHTSVMEDSMSSAMTLTTPQEQVDNLIVQIAEENGLEVMDQLNQLPQGASSVGESST
RTPEDQLSRRLAALRN
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggacgatacactttttcagttgaagttcacatcgaaacagctggagaaattggcgaag
aaggcagaaaaggattccaacacagagcaagccaaagtgaaaaaggcattgcagcaaaaa
aatgttgaagttgcccgagtgtatgcagaaaatgccatcaggaaaaagaatgaaggtctg
aactggctgcgaatggcttcacgggtagatgcagttgcatccaaggtccagactgcagta
accatgaagggggtgacaaagaatatggctcaggtcaccaaggcactggacaaagctttg
agttctatggacttgcagaaagtgtcagctgtcatggataaatttgatcagcaggttcag
aacctggatgtgcacacatcggtaatggaggactccatgagttcagcaatgacactgacc
acccctcaagaacaggtagacaacctcattgtacagattgcagaggagaatgggctggag
gtgatggatcagctgaatcagctgccccaaggagcttcatcagtgggtgaaagctctacc
cgcaccccggaggaccagttgtcccgcaggttggctgctctaaggaactga
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