Xenopus tropicalis (tropical clawed frog): 100216169
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Entry
100216169 CDS
T01011
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04068
FoxO signaling pathway
xtr04110
Cell cycle
xtr04120
Ubiquitin mediated proteolysis
xtr04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100216169 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
100216169 (skp2)
04150 mTOR signaling pathway
100216169 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100216169 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100216169 (skp2)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100216169 (skp2)
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Ortholog
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Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
100216169
NCBI-ProteinID:
NP_001135611
Xenbase:
XB-GENE-919619
UniProt:
B5DDW3
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All DBs
Position
1:198005172..198017357
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AA seq
420 aa
AA seq
DB search
MAVHRKHLQEIPAPSRNASNLMWCWDSNKPSDLFYGMGVTPMEKDLQDTENTPQDYIVKA
SPPQKRPRPKERDECFVIARRPRVARPAQTVISWDTLPDELLLGIFNYLHLIDLLRAARV
CKRWHRLLTDESLWHSLDLTGKHLADGIIGRVLSLGVVTFRCPRSCMGEPMFTKTRHLRL
LHMDLSNSTVSVGALQSILSRCHKLQNLSLEGLVLSDDITRSISQNEDLIRLNLGGCSGF
SSESLKEMLTNCSRLDELNLSWCDFEAEHVKSAVSHLPSSLTQLNFSGYRQNLELSDVKT
LVAQCPDLTDLDLSDSVMLTADCFAVLQQLLHLQHLGLSRCYQICPAALLELGKKIPLKS
LSVFGIVSEGSMQILKESLPHIKINCSYFSTIGRPTTGIRKSREMWGMKCKLTLNYKDYL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacacaggaaacacctccaggagatccctgctcccagcaggaacgcgtccaac
ctcatgtggtgctgggactccaacaagccttcagaccttttctatggcatgggggtgact
cctatggagaaggatttgcaagacacagaaaatacccctcaggactatatagtaaaggcc
agtcccccacagaaacgcccgaggccgaaggaacgggatgaatgctttgtcattgcacgg
cggccccgggtggccagacctgctcagacagtcatctcctgggacacattgcctgatgag
ttgctgttgggcatctttaactacttgcatctcattgaccttctgagagctgcccgggtc
tgcaagcgatggcaccgacttctaacggatgagtccctgtggcacagcctggatcttact
ggcaaacacttggcggatggaatcataggaagagtattgtctctgggcgtggttacattt
cgctgccccagatcctgcatgggcgagccaatgtttactaagactagacatttgcgcctg
ctccacatggacctttctaacagtacagtcagcgtgggtgctcttcagagtatcctctcc
cgctgtcacaaactgcagaacctgagcttggagggactggtattgtccgacgatataacc
cgctccatttcccagaatgaagatctcatccgattaaaccttggcggctgctcagggttc
agttcagaatcactgaaggaaatgctaaccaactgttccaggttggatgaactgaacctg
tcgtggtgcgactttgaggcagagcacgtaaagagcgccgtcagtcacctgcccagcagc
ctaacgcagttaaatttcagtggctaccggcagaacctggaactctctgatgtgaagacg
ctcgtggcccaatgtcctgacttgacagacttggatttaagtgacagcgtgatgctgacc
gccgactgctttgcagttttgcagcagcttctccatctccagcaccttgggctgagtcgc
tgttaccagatctgcccggctgctctgctggagcttggaaagaagatccctctaaagagc
ctcagtgtatttggcatcgtgtcagaaggctccatgcagatcctgaaggaatccctccca
cacataaagataaactgctcctacttcagtaccatcggccggcccactacagggatccga
aagagccgggaaatgtggggcatgaaatgcaagctcacgttgaactataaagactacttg
tga
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