Xenopus tropicalis (tropical clawed frog): 100216176
Help
Entry
100216176 CDS
T01011
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
100216176 (gpcpd1)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
100216176 (gpcpd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDPD
CBM_20
C2_GDE1
PI-PLC-X
Motif
Other DBs
NCBI-GeneID:
100216176
NCBI-ProteinID:
NP_001135617
Xenbase:
XB-GENE-967385
UniProt:
B5DDX4
LinkDB
All DBs
Position
5:complement(24936868..24976445)
Genome browser
AA seq
675 aa
AA seq
DB search
MSAVRVTFQVRGTTLPGEVIALCGNNDVLGFWKPQNAVILQPDDNDCNLWKTSVQLAVGI
PLKYRYFKGCFLGPKNTRDQCQVIIHKWETHLQPRSIKPLDDEYLIDDGEFGVHNGVETL
DSGWLTCQTELRIRLHYSEKQPVSISKKKFKKSRFRVKLTLGGLEEEGEDEEQDAVSPVL
LPKMASTFDISLISNTEYKSRHSQPECGYALQPDRWTEFSIHTMEPDNLELLFDFFEEDL
SEAVVQGDTLPGHVGTACLLSSAMTENGKSNGVLTLPIMSRKARQTLGKVRVDYIVIKPI
QGHNCDLSISFSKYWKPRTPLDVGHRGAGNSTTTAKLAKVRENTVASLKNAASHGAAFVE
FDVHLSKDHVPVIYHDLTCCISMKKKVNSDSLELFEIPVKELTYDQLQLLKLAHVNALKF
KDHHDSIDEESSISDNQPFPSLQTVLESVPEDVGFNIEIKWICQERNGKWDGNLSTYFDM
NLFLDIILRTILEKAGRRRVVFSCFDADICTMVRLKQNKYPILFLTQGHSDIYPELMDLR
SRSTPIAVSFAQFESLLGINVHTEDLLRNPHYIQEAKSKGLVVFCWGDDTNDPENRKLMR
EYGIDGLIYDRIYDWNPEQPNVFQVEQMERLKGELPAEMLKSCICPVINHFCTSSACPNN
RMLVDTNGISNQQPV
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgtgcgagtcactttccaggtccgcggaacaacactgccaggggaggttatt
gcactgtgtggtaacaatgatgttctgggtttctggaaacctcaaaatgcagtaatccta
caacctgatgataatgattgtaacctttggaaaacaagcgttcagcttgctgtaggaatt
ccactgaaatatcgatattttaaaggttgctttctgggaccaaagaataccagggatcaa
tgccaagtcataattcacaagtgggagacccatctgcagcctcgatcaataaagccttta
gatgatgaataccttatagatgatggagaatttggagtccacaatggcgttgaaacttta
gattccggatggctgacatgtcagacagagcttagaatacgtctacattattctgaaaaa
caacctgtctctatttctaaaaaaaaatttaaaaagtctaggtttagagtgaagttgacc
ctgggaggcttagaagaagaaggtgaagatgaagagcaagatgctgtttctcctgttctt
cttccaaagatggctagcacatttgacatctcattaataagcaatacagagtacaagtct
cgtcactcccagccagaatgcggttatgccctgcagcctgatcgctggacagaattcagt
atacacaccatggaaccagacaatttggaactactttttgacttttttgaggaagatctg
agtgaagctgtggtgcaaggtgacactcttccggggcatgtaggaactgcatgtcttctg
tcatctgcaatgacagagaatgggaaaagcaatggagttctgacccttcccataatgagc
agaaaagcaagacagacacttgggaaagttcgagtggactatattgttattaagccaatc
caaggccataactgtgacttgagcatttccttctccaaatactggaagccaagaacacca
ctagatgttggacacagaggtgctgggaactccaccacaactgcaaaattggctaaggtt
cgtgagaacacagtggcttccctaaagaacgctgccagccatggggcagcctttgttgaa
tttgatgttcacctttccaaagatcatgtccctgtcatataccatgatcttacttgttgt
atatcaatgaaaaagaaagtaaattctgattctttggagctatttgagatccctgtaaag
gagcttacttatgaccagctgcagctattaaaacttgcacatgttaacgcactaaaattt
aaagaccatcatgattccattgatgaagagtcttccatttcagacaaccagccttttcca
tctcttcagacggttttagaatctgtccctgaagacgttgggtttaatatagaaatcaag
tggatctgccaggaaagaaatggcaaatgggacggcaatctatccacttattttgacatg
aaccttttcttggatattattttaagaaccattctggaaaaagctggcaggaggagggtg
gtgttttcttgctttgatgcagatatttgcacaatggttcggctgaagcagaacaaatac
cccatactcttcctgacgcaagggcattctgatatttatccagagctgatggatctaaga
tctcgttcaactccaattgcagttagttttgctcagtttgaaagcctcttgggaattaat
gtgcacactgaagatctcctgaggaacccacattacattcaagaagctaaatcaaagggc
ttagtggtattctgttggggagatgacaccaatgatccagagaaccggaaactaatgaga
gaatatggaattgatggattaatttatgacaggatatatgactggaaccctgaacagcca
aatgtattccaggttgagcagatggagcgtctcaagggagaacttccagcagaaatgttg
aaaagctgcatctgtcctgtcattaaccacttctgcacctcttctgcctgccccaataac
cggatgcttgtggacacgaatggcatctctaaccaacagccagtttaa
DBGET
integrated database retrieval system
