Xenopus tropicalis (tropical clawed frog): 100216180
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Entry
100216180 CDS
T01011
Symbol
rnf115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100216180 (rnf115)
04121 Ubiquitin system [BR:
xtr04121
]
100216180 (rnf115)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100216180 (rnf115)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100216180 (rnf115)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100216180 (rnf115)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
Zn_ribbon_19
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
HypA
zf-Nse
DZR_2
C1_2
DZR
CoiA_N
VPS18_RING_C
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
100216180
NCBI-ProteinID:
NP_001135621
Xenbase:
XB-GENE-993231
UniProt:
B5DDY5
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All DBs
Position
8:complement(141761006..141780147)
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AA seq
295 aa
AA seq
DB search
MAEAAAVSQHRFFCHHCKGEVNPKLPEYICPRCDSGFIEEVTEESSFLDSSGSALDDSSP
AQFTELWDHLDQAMFIPDFRHFLSSSSSLDQDGRDHERGHPAHTELRLTRRPPRQPMTRY
RSRVSSRPDRSPAIEGIIQQIFAGVFANPPFPGSPHPLSWSGMLHSNPGDYAWGQSGLDS
IVTQLLGQLENTGPPPADKDKIVSLPTVTVTREQVAMGLECPVCKEDYAIEEQVRQLPCN
HFFHGDCIVPWLELHDTCPVCRKSLNGEDSTRQAPSSEASGSNNFSSDSPDRWTF
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcagcggtgtctcagcatcggttcttctgccatcactgtaagggggag
gtcaaccccaagctgccggagtatatctgccccagatgtgactctggattcatcgaggag
gtgacggaggaatccagtttcctagactccagtggaagcgccctcgatgacagttccccc
gcacagttcacagagctctgggaccatttagaccaagcgatgttcatccccgacttccga
catttcctgagcagcagcagctctttagatcaagatggccgagaccacgagcggggccac
ccggcccatacggagctgaggctgacccgccggccccccaggcagccaatgacgcggtat
agatcccgggtcagctcgcgccccgaccgctctccggccattgaaggcatcatccaacag
atctttgccggagtattcgcaaacccgccctttccggggtcaccacatcccctctcttgg
agtgggatgctgcattcgaatccgggggactacgcgtggggccagagcgggttggactcc
atcgtcacacagctactggggcagctggaaaacaccggtcctcccccggccgacaaagac
aagattgtgtccctcccgactgtcactgtaacccgggagcaagtggcaatgggcctggag
tgcccagtgtgcaaagaggattacgccatagaagaacaagtaaggcagttaccctgcaac
catttcttccacggagactgcatcgtgccttggcttgaactgcacgacacgtgccccgtt
tgccgaaagagcctgaacggcgaggactcgacgagacaagcccccagttccgaggcgtcc
ggtagcaacaacttcagcagcgacagccccgaccgatggaccttctga
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