Xenopus tropicalis (tropical clawed frog): 100216253
Help
Entry
100216253 CDS
T01011
Symbol
sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X2
KO
K20353
COPII coat assembly protein SEC16
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100216253 (sec16a)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100216253 (sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
100216253
NCBI-ProteinID:
XP_002935278
Xenbase:
XB-GENE-986385
UniProt:
A0A6I8QF85
LinkDB
All DBs
Position
8:complement(6524445..6555903)
Genome browser
AA seq
2342 aa
AA seq
DB search
MQPPPQAGPPGMGGPPRMGMGNNAYWRKRGPNPVSSASTSVQPVTDPFAFGRMTPQSMAQ
GSAPTGNPLMAPSPSPSMYPQPVPVHGSGAGDQGHVSPPSLVGAVPQPVARGEMYTSVSA
PSAASAPFTNYPAAAPIAQPGLGNMQTYQNTASGLENAFVPVQSRAQSAQGLSTAPYFAP
APSQPTSAPWGSLPNAPPVSNQNFPLPVQQQSHNSPYYSPPYLEVSNLAPQASETGAQPA
QQRAAPGYYPPTSVSNPTFQHSSSQPPSLNPTDYMHGQNPEQNWFNQPYKDQRHPPLPSS
NPVQYPPPQQPEPHQEVPSASGRVSTNADSGTISMFFKGEEEENVEIVSSDQQNASIKAD
LGSSHYQNAGYQGVSSLLPQPTVSSGIPAMTPITLASGVPHVPSSAGNATHPHSAWRQDT
LPLRDNTAKPREMPYDNVENIECVQNQEVLPNEPNHFNPYPPNVTSDAYRYGPVPGPPLP
KNVSGHPEVGPNLETPDTVGCPVRPDSVSSNYSNLSLKSLPVPTRSQEHAGTFIQKESGR
LEGDSSHSFFKQIDSSPMTGDAVGQNMGQHKFHSSLSQPPTPSPPKPTGIFMTSANSSFE
PVRSHSIGLKPSDADQSKMGGEGHKVLQNASIPVASPGNLEQPPDNLETIFLGKRNSHGT
VTSNGSLFHSVGEPPLDNVSLLLDRRPSSRAQGSSKKCESPATTLWAQGELPNFGGNVLL
APAAPSLYVPPKPQTEIIQPPEDGSYDSRAGGTDPGKFQASPEEQISSENLENPPKIGDE
EQLSSQASSGYASLLSSPPTEALQNQPVLIAQPNKTYNLAQPINFSLSLPNQVKNVNSLK
EPGTAEKQGPQSLPPAVGNFSSNENAPFSLTQGRPEVPNQSNYKSAAPNDKFSESLPNQH
SVLQRQSSANQAPLNLAAESQKVPMGENATVDFANKTAIPTTAPMGPRFPANPNCRPSYP
AEKSGALDFTVPRAPLSSVANNVALSNSQPVAGGPLVPGQPVGAQNGQAGLDINKQGFYQ
QVTKDGPPQQPAKDIPHHGGVAPQEYMVPASHPLPLVPPAQAPPGGKPVSYPLQAESQVP
ASQNPIGAPYNSAPEPAPKYGPTEQPPYPAQPVPSSSAPVNLNHTATYQEQPRPPASHTP
QQADPYYYYRSYGAYPQPYGQPYQQVDPRAAPLYYQDPYGAYDPAYRQYSGTAYANPGKY
PYQEPERPSSRSSHCSDRPSSRQGYSSKSDWSGYYPGYYQSQYDYADPARWDRYPAAYDP
GYRDPRSNYWNYMYNSRDDAYQRNVPAAYTSRYDVYEDRWQYDPRYVGGFDDEPQRDLAK
DDFDRRSIHSEHSAHSMHSGRSNHSRRSSFSSHSQHSQIYKSQPDLTASAYEPQIQNPPL
NEYSYGMYPNDYSAQQGLDNYSYGYPKATEWQPVEQVPSRPLTPEKFGSPHVCARFGPGG
QLIKVLPNLPSDGQPALVEIHNMEVVMQNSAEQEQLRAFPGPLVKDETHKVDVINFAQKK
SKECSQNESLLDQESACLVWDFIVLLCRQNGTVVGTDIAELLLRDHKTVWLPGKSPNEAN
LIDFSNEPLEQREEESGASQLSFLTDTLQSTGEALEKETERFRELLLFGRKKDALESAMK
TGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLLSGRMPAAATCCGDEKWG
DWRPHLAMVLSNLTNNVDVPTRAMTAMGDTLASRGLLDASHVCYLMAQVGFGIFTKKSTK
LVLIGSNHSLSFARFCTNEAIQRTEAYEYAQSLGTQSFSLPNIQVYKFIYACRLAEHGLS
AQAFHYCEVISKTVLRHPSCYSPVLVSQLLEVSSHLRFCDPQLKEKPEQELFIDPPWLQH
LRTLDQQMKHGTVVYDTGRTTPQQFACSTPSSDMDHVSQSDGAGTAADVPTHTDNPLLAS
LLPNMMPPVQAVLVPAGPENPAPMYPSYPGNDPSHPGTPQGLAPSSGPPTPATAPGFVPF
GGEQAPIYPPAPLQPYLPPPQAADYAPPMQMNQDPGLQRIQQNSPTKTTFHDPEVDFYGV
MAKMGPGQRSRTVSQSSSHMRRTRTTSESSTHSIGSGRRSSMSIQPSPPPIPEADRAEEK
KEHKPRGPSQGSGRSWFPLKFGWLMGKGKNEAHLPDDRNKSIVWDEKKQKWVNMDEPEEE
SKPLPPPPPGMLKKPQSTPAVPGGPPNPSVNVFSIRAAGARGRYVDVLNPGGPRPTNSVP
PPADLFAPLAPMPIPTNLFVPNAVPEEAHPAEASGAEMVPAAGQMGPINPPQAQLPGLTP
GLDQDEGQMGEASANMAPASGPPPTGAVPFYNPSQFAQQPPSAPTGGLRPGRLGQRKYPS
LK
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctccccaagctgggcctccaggcatgggcgggccccctcgcatgggaatg
ggcaataatgcctactggcgcaaaaggggacccaatcctgtatcatccgcttctacatcg
gtgcagccagtgaccgacccttttgcctttggccggatgaccccacaaagtatggcgcag
ggcagtgccccgacaggaaacccactgatggcaccgagtccgtccccgtcgatgtaccct
cagcccgttcctgtacacggatcaggggccggagaccaagggcatgtgtctcccccatca
ctagtaggagccgtaccacagcccgttgctaggggtgagatgtataccagtgtatctgcc
ccgtcggcagcaagcgccccttttaccaactacccagcagccgcgcctattgcccagccc
ggacttggtaacatgcagacttatcagaatacggcgagtggacttgaaaacgcctttgtg
ccggtgcaaagcagggcccagtcagcccaaggcttatctactgccccctactttgcccct
gcaccgtctcagccaactagcgctccctgggggtccttaccaaatgcacctcctgtctcc
aatcagaacttcccccttccagttcagcaacaatcccataattctccttattactccccc
ccttatttagaagtctctaatctggcacctcaggcaagcgaaactggggcacagccagca
caacagagggcagcgccagggtactacccacctaccagcgtctccaatcctacctttcag
cacagcagttcacaaccccccagtttaaacccgacagactatatgcatgggcagaatcct
gagcagaactggttcaaccaaccatacaaggatcagcggcacccacctctgccaagttct
aacccggtacaatacccgcctccgcagcagcccgagccccaccaggaggtgcctagtgcg
tctggtcgagtctcaaccaatgcagactctggtactatatcaatgttttttaaaggggaa
gaagaagaaaatgtggaaatcgtttcttccgaccagcagaacgcatctattaaagcggac
cttggttcttctcattaccagaacgccggatatcaaggtgtgtcttctctactgccgcag
ccgacagtcagcagtggcattccggcaatgacaccgatcactttagcgtctggcgttccc
cacgtcccctcatctgccggcaatgccacccatccgcattcagcttggaggcaggacacc
cttcctcttcgcgataatacggctaaacccagggagatgccctacgacaacgttgaaaac
atcgagtgtgttcagaaccaggaagttctccccaacgagcccaatcattttaacccttat
cctcctaatgtaacttccgatgcgtaccgatacggaccagtgcctgggccccctctacca
aagaacgttagcggccatcctgaagtgggtcccaacctagagacacctgacacggttggt
tgtcctgtccgacccgatagcgtctcttcaaactatagcaacctgagtctcaaaagcctg
cctgtgccaacccggtcacaagagcatgctgggacttttatccagaaggagagcggcagg
cttgagggtgactcctcccacagtttctttaagcaaattgattcgtcccccatgacaggt
gacgctgtagggcagaatatgggtcagcacaagttccacagcagtttatcccagccgcca
actccgagtcctcctaaacccacagggatcttcatgacaagtgcaaacagttctttcgaa
ccagtaagatcgcacagcattggtttgaaaccatcggacgcagaccaatcgaaaatgggt
ggagaggggcataaggttctacaaaacgcctctatcccggtggcttccccggggaacttg
gagcaacctccggataatctggaaaccatattcttaggcaaacggaactctcacggaacc
gttaccagtaacgggagcctgttccattctgtcggggagcccccattggataacgtatct
ctactgctcgacaggcgtccgtcatccagggcgcaggggtctagcaagaaatgcgagagc
ccagccaccaccctgtgggctcaaggagagcttccgaatttcggagggaatgttctgttg
gctcctgcggctccttcgctctacgtgccccctaaaccccaaacggaaataattcagccc
cccgaagacgggtcgtacgattcccgtgccggcggaaccgacccggggaaatttcaggct
tctccggaagaacagatctcttcggaaaacctggagaaccctccgaagatcggagacgag
gagcagctgtcctcacaggcaagttccggttacgccagtttgctgtcgtcgccacccacc
gaggcactgcagaaccagcccgtgcttattgcccaacccaataagacctataatttggca
caacccattaatttttcattgtctttaccgaatcaggtgaaaaacgttaattcgcttaag
gaaccgggaacagccgaaaagcagggtccccagagtttgcctccggcggtggggaatttt
agctccaatgagaatgctccgttttccctgactcaaggccgacccgaggttcctaatcag
tctaattataaatctgcggctcctaatgataaattctctgaatctctccccaatcagcac
tctgttttgcagcggcaatcgtcagccaatcaagcgcccctcaatttagcagcggaaagc
caaaaggtgccgatgggcgaaaacgccaccgtcgactttgctaataaaaccgcgattcca
accaccgctccaatggggccgcgtttccctgccaatcccaactgccggccaagttaccca
gcggagaagagcggcgctctagattttacagtccctcgggcgccgctcagttccgtcgcc
aataacgttgctttgagtaacagtcagccggttgccggagggccgctcgttcctgggcag
cctgtcggagcgcagaatggtcaggccggcttagacattaacaagcagggtttctaccag
caggtcactaaggatggccccccgcagcagcctgctaaggatattccacatcacggtggg
gtggccccgcaggaatacatggtccctgcctctcatccgttacccttggtccctcctgca
caagcacctccagggggtaaacccgtatcttaccctctccaagctgaaagccaagttcca
gcttctcagaaccctatcggcgctccgtataacagcgcaccagaacctgcacccaaatac
ggaccaactgaacagcccccctatccagctcagcctgttccttcatcatcagccccagtg
aacctcaaccacacagcaacctatcaagagcagcccaggcctcccgcctcccatacccca
cagcaagctgatccctattactactacaggtcttatggtgcgtatccacagccgtacggg
cagccttaccaacaggtggatcctagggctgcgcctctttattatcaggacccctatgga
gcttacgaccccgcctacaggcagtacagcggtaccgcgtacgcaaaccctggcaagtac
ccataccaagagccggaacgtcccagttctagatccagccactgctccgatcgcccctcc
tcaaggcagggctatagcagtaagagcgactggagtggctactacccggggtattaccag
agccagtatgattatgcagaccccgcccgctgggaccgctatcccgccgcctacgaccct
ggctatagagaccccaggagcaactactggaactatatgtacaacagccgcgatgacgct
taccaaaggaacgtgccggccgcttataccagcaggtatgatgtgtatgaagaccgctgg
cagtacgaccctcgctacgtcgggggcttcgatgacgagccacagagagaccttgcaaag
gacgacttcgaccggcgcagcatccacagcgagcattccgcccacagcatgcacagcggg
cggagcaaccacagtcggagaagcagcttcagctcccattctcagcacagccagatctac
aaaagccagccggacctgactgccagcgcgtatgaaccccaaatacagaatccacccctc
aacgagtattcctacggcatgtaccccaatgactacagcgcccagcaggggcttgataac
tactcctacggataccccaaggccacggagtggcaacctgtagagcaagtgccttcgagg
ccgttgactccagagaagtttgggagcccccacgtctgcgccaggttcggaccagggggt
cagctgataaaggtgctccccaaccttccttcagacgggcagccggccttagtggaaatc
cacaacatggaggtcgttatgcagaacagcgcagagcaggaacagctaagagctttccct
ggacctttagtgaaggatgaaactcacaaagtcgacgtcatcaattttgcccagaagaaa
tccaaagagtgttcccagaatgagagcctgctagaccaagagtccgcttgcctggtctgg
gacttcatcgtgcttctgtgccgacaaaacgggaccgtcgtagggaccgatatcgccgag
ctcctcttgagagaccacaagacggtctggctgcccgggaagtctcccaacgaagccaac
ctgatcgatttcagcaacgagccgctggagcagcgggaggaggagtcgggggcctcccag
ctgtccttcctgacggacaccctgcagagcaccggggaagcgctagagaaggagacagag
cgcttcagagagctgctgctttttggccgtaaaaaggatgccttggaatcagccatgaaa
accggcctgtggggccacgctttgctccttgccagcaaaatggacagccgaacgcacgcc
agagtcatgacaaggtttgccaacagccttccaattaacgatcccctgcagaccgtgtat
cagctcttgtctgggagaatgccagcagcagccacgtgctgcggcgatgagaaatggggc
gactggcgccctcacctggccatggtgctgtccaacctgaccaacaacgtcgacgttccc
accagggccatgacggcaatgggcgatacattagcatctcggggactgttggacgcctcg
cacgtctgctatttgatggcacaagtcggctttggcatttttaccaagaaatccaccaag
ttggtcctcattggatccaaccacagtttatcatttgccaggttttgcacaaacgaagcc
atccagagaaccgaggcctacgagtacgcgcagtcgctaggcacccagtccttctccctc
cccaatatacaggtttacaagttcatctacgcctgccggttggcggaacacggattatcc
gcgcaggccttccattattgtgaggtgatctccaagaccgtcctgaggcacccgtcgtgc
tactcccctgtgcttgtcagccagctgctggaggtctcctcccacctgaggttctgcgac
ccccaactgaaggagaagccggaacaggagttatttatcgaccccccgtggctgcagcac
ctgcgcaccttggatcagcagatgaagcatggtactgtggtttatgacacgggcagaacc
accccgcagcagtttgcctgcagtaccccaagctcggacatggaccatgtcagccaatca
gatggtgcaggaacagccgctgatgtaccaactcatacagacaatcctttgttggccagt
ctcctgcccaacatgatgccacctgtacaagctgtgctagtgcccgctggtcctgaaaat
ccagcacccatgtatccttcctacccagggaatgatccctcccacccaggtacccctcag
ggtctggctccttcatctggacctccaactccagctacagctcctggttttgtgccgttt
ggtggggaacaggcccctatttatccacctgcccctcttcagccgtacctgcccccaccc
caggcagcagactatgcaccccccatgcagatgaatcaggatccaggactgcagaggatt
cagcagaattcccccaccaaaactaccttccacgatcccgaagttgatttctacggagtg
atggcaaaaatgggccccgggcagcgatcacggacggtgtcacagtcctcgtcacacatg
agacggacacggacaacctcggagtcctctacccactccatcgggtcggggcgcagaagc
tccatgagcatccagccatcgccccctcctatccccgaggcagacagggcagaagagaag
aaggaacacaaacctcgcggcccatcccaaggaagtggtagaagttggtttcccctgaaa
tttggctggttgatgggaaaaggcaagaacgaagcgcacttacctgatgacaggaataaa
tctattgtgtgggatgagaagaagcagaagtgggtgaacatggatgaaccagaggaagag
agcaaaccattgcctccgccgccaccagggatgcttaaaaagcctcagagcaccccagct
gtcccagggggtccccccaatccttccgtcaatgtattctccatcagagcagcgggggca
agaggtcgttatgtcgatgtgttaaacccggggggtccccggcctaccaactctgtccct
ccgcctgcggacttgtttgcacctttggcccccatgcccatccccacaaacctctttgtc
ccaaacgcagtgccggaggaagcccaccctgcggaagccagcggggcagaaatggtacca
gcagccggccagatggggcccattaaccctccccaggcgcagttgcccggtttgacccct
gggttggatcaggacgaggggcaaatgggagaggcttctgctaatatggcccctgcctcc
ggccccccacctactggcgccgtccccttctacaacccctcccagtttgcacaacagccg
ccttctgccccaacgggggggctacggcctggacgtctcggccagaggaaatacccttcc
ttaaaataa
DBGET
integrated database retrieval system
