Xenopus tropicalis (tropical clawed frog): 100216300
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Entry
100216300 CDS
T01011
Symbol
myom2
Name
(RefSeq) myomesin-2 isoform X3
KO
K24495
myomesin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100216300 (myom2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100216300 (myom2)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
100216300 (myom2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
ig
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
Motif
Other DBs
NCBI-GeneID:
100216300
NCBI-ProteinID:
XP_002935205
Xenbase:
XB-GENE-922589
UniProt:
F7DL16
LinkDB
All DBs
Position
5:complement(98373013..98509324)
Genome browser
AA seq
1480 aa
AA seq
DB search
MSSKGVSFYQKKHKHYDQSYRNLETRYVVQEYSAQKRSASASTLRSSASSSLSRKKCICG
ANQEVQEYYVPAFKKRTEEQEAELQQIRHRRYDRATHYSTQLAHMEEDIRVARALAREQI
DKVSIQRMVEEKLSLQRRIHEESISRAPDILVRLRSHTVWEGMSVKLFFTVQGYPTPVVQ
WYKNESLVSPASEPGKYRIESKYGVNSLEIYRANYNDTATYTAVATNVHGQSSTNAAVIV
RRYRDEEDPLHSVLLPLSLPLSTAICFTHIDVQFLEKFGVSFGIEGETMTLSCDILLTPD
ISRLRPQPEWYRDDVLVKESKWHQMHFGEGRATLTLTHLNKDDEGLYTLRIVSRGGVNEH
SAFLFVADAAALVAGAPGAPMDVECHDANKDYVIVTWKPPNTASEAPVIGYFIDKCEVGT
ENWIQCNDSPVKICKYPVTGLFEGRSYIFRVRAVNKAGISRPSRVSIAVAALDPADLARL
QTIHLDGGREIVICQDDLEGEVKIPGPPTNVQALETSKTYIVLSWDPPVPRGRDPIVYYV
EKTMVGSGSWQRVNAQIPVRSPRYAVFDLAEGKSYNFRVISVNKHGASEPSEITPPIQAQ
ERLAVPSAPGRIQASRNTRSSVVVQFDKPKLEEELIGYYIDSSVVGSNHWETCNHKPIKY
NRFVVHGLTTGEKYIFRVKAANAVGVSENSQESEAITVKAALTTPSHPYGITLLNCDGHS
MILGWKLPKFTGGSAINGYYIDKREANHLNWHEVNSSIVQERVYKVEDLTEGAFYEFKIA
ASNLAGLGLPSDPSDHFKCEAWTMAEPGPAYDLTFCEVRNSSLVILWKAPIYSGKSAVSG
YFVEYREVESEEWTRVNKSATENRYLKVTGLEEGKTYVFHILAVNGSGTGKPSDVSEPVL
VQARPGVKEITAGVDEEGSIYLDYSCSEMTEASQFTWCKAYEEVDDESKFKAESIGENSR
LYFKNPDKDDLGTYSVSVSDTDGISSSFVMDSEELERLMALSHEIRNPTIPLKTELTYEI
LERGKVRFWIEAPSLSAETSYRFVVNDMEVKDSESHRIKFDKSTGVIEMVMDKFTIENEG
TYTVQIQDGKAKNQSSLVLIGDAFKALLAEAEFQRKEYIRKQGPHFLEYLYWEISEECEV
LLVCKVANVKKETVFKWFKDEVPVEAEDQPDLQSGVCIYRIPKLTKKDQAEYKATLKDDR
GQDVSILQLSGKIYDDIILGMSKVSGSAASELKIQCTPEGIRFHCYMKYYTEDMKVAWYQ
RESKISSSEKMKIGGTDEFAWLQICEPTEKDKGKYTFEIFDAKTSYKRTVDLSGQAFDEA
FAEFQRLKAAAFAEKNRGKVMGGLPDVVTIMEGKTLSLTCTVFGNPDPEVSWLKNDRDLE
ITDHFKSTMEQGKYASLTIKDVSSEDSGKYGINVRNKYGGETVDVTVSVYKYGEDLPEVK
PSQLSKPAPAPAPAPAPAKTSTPEKPKAPPSKPAGRSTRK
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgaaaggtgtttctttctatcaaaagaaacataagcactatgatcaatcatat
cgcaacctcgaaaccagatatgtagtccaggaatattctgcacaaaaaagaagtgcctca
gcttctactttgagaagttcagcatcttcctccttatcaagaaaaaaatgcatttgtgga
gctaatcaggaagtgcaagaatattatgtccctgcatttaaaaaaaggacagaggaacaa
gaagctgagctacagcaaatacgtcaccgcagatatgaccgagctactcattattcaacc
cagctggcccatatggaagaagatattcgtgtggcaagagccttggcaagggaacaaatt
gataaagtttctatacaaaggatggtggaagaaaagctgtcgttacagaggcgtatacat
gaagagagtataagccgagctccagatatccttgtacggctcagatcacatacagtctgg
gaaggaatgtctgtaaagctttttttcacagtccaagggtatccaacccctgtagtacaa
tggtataagaatgagtcattggttagtccagctagtgaaccaggaaaatacagaattgaa
agcaaatatggagtaaacagcctggaaatatacagagctaactataatgatactgctaca
tatacagcagtagctaccaatgtccatggccagtcctctactaatgctgcagtcattgta
agaagataccgtgatgaagaagatcccctccactctgtattactgccactaagtttgcct
ttgtctacagcaatttgctttacccatattgatgttcagtttttggagaagtttggggtg
tcatttggaattgaaggtgaaactatgactttatcatgtgatatattgttaactcctgat
atcagcagactgcgacctcagccagagtggtacagagatgatgtcttagtcaaagaatcc
aagtggcaccaaatgcattttggagagggccgtgcaaccttaacactgacacacctaaat
aaggatgatgaaggactgtatacactaagaattgtctcaagaggcggagtaaatgagcac
agcgcatttctatttgtggccgatgctgctgccttggtggcaggtgcacctggtgcccca
atggatgttgagtgccatgatgctaacaaggattatgtgattgtaacttggaaaccacca
aacacagccagtgaagctccagtcattggatactttattgataagtgtgaagtgggcact
gaaaactggattcagtgcaatgattctccagtaaaaatctgcaaatatcctgttactggc
ttgtttgaaggacgttcttatatattccgagtacgagccgttaacaaagctggtataagc
agaccttctagagtttcaatcgctgtcgcagctctggaccctgctgatctggccaggcta
caaacaatccatctggatggaggcagagaaatcgttatctgtcaagatgacttggaaggt
gaagtaaaaatcccaggacctcctaccaatgttcaagctttagaaaccagcaaaacatat
attgtactcagttgggatccacccgttccccgtggcagagatccaatcgtgtattatgtt
gagaagacaatggtcggtagtggaagttggcagagagtcaatgcacagatcccagtgagg
tcccctcgctatgcagtatttgatttggcagagggaaagtcatataattttagagtaatt
tcagtaaacaagcatggtgccagtgagccatcggaaataacaccaccaatacaagcacag
gaacgtttagctgtgccatctgctcctggtcgtatacaggcatctagaaataccagaagt
tcagttgttgtacagtttgataaacccaaactagaagaagaattaattggatattatatt
gattcttctgtggtgggatcaaatcattgggaaacttgcaatcacaaacctattaagtat
aacagatttgtagtccatggcttaacaactggagaaaagtatattttccgtgtaaaggct
gctaatgctgtcggagtcagtgaaaactctcaagaatcagaagcaataactgttaaggca
gcattaactactccatctcatccatatggcattacccttctaaactgtgatggtcattca
atgattttgggttggaagttacccaaatttactggtggttctgctattaatggatactat
attgataaacgtgaagctaatcacttgaattggcatgaagttaattccagcattgttcag
gagagagtttataaggttgaagatcttacagagggtgcattctatgaatttaaaatcgct
gcatccaaccttgcaggccttggtcttccatctgacccaagtgatcacttcaagtgtgag
gcatggacaatggcagagccaggccctgcatatgatctgacattctgtgaggtgaggaat
tcatctctggtaatactttggaaagcacccatctattcaggcaagagtgctgtttctgga
tattttgtggaatacagagaagtagagtcagaggagtggactcgtgtgaataagtctgca
acagaaaaccgatacttaaaggtcacaggtttggaagaaggaaagacttatgttttccat
atcctggctgtaaatggttcaggaactggcaaaccctctgatgtgtccgaaccagttctg
gtacaggcacgaccaggagtgaaggagatcactgcaggtgtggatgaagaaggcagcatt
tatcttgattacagctgctctgaaatgacagaagcatcgcagtttacatggtgcaaagct
tatgaagaggttgacgacgaatccaaattcaaagctgaaagcatcggagaaaactccaga
ttatactttaaaaacccagacaaagatgacttgggaacctactcagtttcagttagtgat
acagatggcatttcatcaagctttgttatggattcagaggaacttgaacgcctgatggct
ctaagccacgaaatcagaaatcccactatacctctaaagacagaattaacctatgagata
ttggaaagaggcaaggtccgtttctggattgaagctccaagtttgtctgctgaaacaagt
tatagatttgttgtgaatgacatggaagttaaagacagtgagagccacaggattaaattt
gataaatccactggtgtcattgagatggtgatggataagtttacaattgaaaatgagggc
acttatacagtacagattcaagatggaaaagcaaagaaccaatcttctttagttcttatt
ggagatgcgttcaaagcactgctggccgaagctgaattccagaggaaagaatatattaga
aaacaaggtcctcattttcttgaatatttatactgggaaatttcagaggaatgtgaagta
ttactggtgtgcaaggtagcaaatgttaagaaagaaacagtttttaagtggttcaaagat
gaggtcccagttgaggctgaagatcaacctgatttgcagagtggagtgtgcatatacaga
attccaaagctgactaagaaggatcaagctgaatataaggcaacactgaaagatgacagg
ggtcaagatgtgtctatccttcaactttctggaaaaatatatgacgacataatccttgga
atgagcaaagtcagcggatcagctgcttcggagcttaaaatacaatgcacacctgaagga
attcgattccattgttacatgaaatactacacagaagatatgaaagtggcctggtatcaa
agagaatcaaagatttcttcaagtgaaaagatgaagattggaggcacagatgaatttgct
tggttacagatttgtgagcctacagaaaaagacaaaggaaaatacacatttgagatattt
gatgctaagacatcttataagcggacagtggatttgtctggacaagcatttgatgaagcc
tttgcagaattccaaagacttaaggcagcagcctttgctgagaagaatcgtggtaaagtc
atgggaggactgcctgatgtggtaaccataatggaaggcaagacgttgagccttacctgc
acagtgtttggaaatccagatcctgaagtgtcttggctcaagaatgatagggatcttgaa
ataactgaccatttcaagtctactatggaacaaggaaagtatgctagcctgacaatcaaa
gacgtatcttcagaagactctggaaaatatggaatcaacgttagaaacaaatatggaggt
gaaacagtggatgtcactgtaagtgtatacaaatatggagaagacctacctgaagttaag
ccttcccagctttctaaacctgcacctgcgcctgcacctgctcctgcaccagctaaaact
tccacacctgaaaagcctaaagcccccccatctaagccagcaggaaggtcaactagaaag
taa
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