Xenopus tropicalis (tropical clawed frog): 100270771
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Entry
100270771 CDS
T01011
Symbol
cntrl
Name
(RefSeq) centriolin isoform X3
KO
K16770
centriolin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100270771 (cntrl)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
100270771 (cntrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
CCDC39
SlyX
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
100270771
NCBI-ProteinID:
XP_002941352
Xenbase:
XB-GENE-959037
UniProt:
A0A8J0QT01
LinkDB
All DBs
Position
8:complement(9760054..9820490)
Genome browser
AA seq
2420 aa
AA seq
DB search
MAPHFPSLLPASQPALLSCCVDGDTDPAPQVVSPLSSSAAATLASVAPTPEVRNQLHTKG
GGKLKGGYALPWQHPSTDRLQLLLWGQAAAYDWPHFLKMKKNLRPNKSPNMKSPSSASKG
KSPVAYRSLASGYNLLDVTEESDAPEHDGEKTRGNEVGVRYITESLIQKQTKQENLAYVT
SLNLCLAKEGGKKFKFIENLEKCERLEVLNLSHNLIEKIEKLEKQIRLRELNLAYNKISK
IEHFEHMQNLKKLNLAGNEIEHIPVWVGKKLKSLTALNLKENRISSLQDVSRLKPLKDLT
TLSLSDNPVSNLPHYRLYTVFHLRSLNSLDAQPVTNQERQEAHERFNLEELEKLERELEK
KISEIDELQNQKAKITGELQNQDELNRSLKQEALQQKKSYKELEQEMETKNEILKQKTVE
LTRACQKQYELEQELAFYKIDAKFEPLGYFESENVEVEDVPGESPYIGKARYKRNMYARE
SFIANPAQPLQMGKIEPDEDSQIRNQQIQARIHTALDVELGDKERNIQAAQGKLADLQHE
ILNSEKQILKATEELKELEDAVAQKKMSEAEKERLRQQLSGKIQLLNQLRQEALELEKQM
EWQRREMDKKHREIEDLGKHLASLSPLDPRHSHVKAQKAGKEQQLDMMDQNYRQLEGRLD
DMLSRIAKETEEIKDLEQQLTEGQIAANEALKRDLEGIIAGLQEYLESVKGQAKQAHDEC
RELHAEREDLLQRLTELEEEKKQLEAVALEAEGMRKEIAELEHSLQEQQELNESLRQAQG
DLSEYEAELEAQLKARDAEAKQLKEELERRKRLSHMESSALQAELEKDKQALENALTKAQ
LLEETDQENQKLLSQMDQLQGENDYLKEQLENFQAQLANAVDNLVHPEQISARVSELKRK
LQTGVGEIRCTSPTDVLGRNLAELQQQFNEILAKSQEEKKEAQERQRKLQEEIAALQEKA
KEAPAEYKRACNKAAEAKMQALKRQYEAKLRQLENEIQRLKGKLKSMEEIQGLADQQLVE
ADEEREKLLSELQDMENQRKMEDAVAQKQLSALDKELRELKRAVAVSDKLAASELSNAKE
QLQSLHGTVLKINQERVEEMKEAENVNTQAEQASRNLAKAEAEIDLLQNILKEREKQLQE
EMQNADAGMATSSYQHQEIEKLNHTMRRQRGEIDRLKHLLDHARLDNIDEIENLLDEIES
LRNTLGYQNDYITSMADPFRRKGYWYYVPSPSNTSGPDSLSTKDSGLGLHYPVTSSPARR
KCSHGRHNKKDECARCASGHWVYSPLRHGTRRGHTHRDGEDGDGEESDASATPQRHFMPP
AGSVIYTVLPDGTPAPQGTVVYGPPPPSSGRPVAPGTVIYGPPPVGTQIIYGPPPPHFTI
PVIPAGVLHCNVPGHHNLENELTRLEDIIDHLKSRRHKEKRSKERLQEDIDDLEHQKEIL
RKEVEELRVSGQRRKRKNFVDGHIGTLITELELEKSLQHHDEIEDEIGCIEKTLLKRRAE
LREADRLLAEAEAELQSTRAKTTDIIEKYTCAKKHLSTTESDAEELERRAQETARQLVKA
DQQLRMLQRSACDLEQHRAEQESMLTEINSVVSEKDSEFQALGKKIDTMTESLQKLHADI
QVVAAKEANHLQALKEAESLLQEKKAVLERIDEQVYAQQQDIAGMDRLLGQKKEELHLLQ
DHIDHKKADLKEVLRDGELDVADCRQEIQEVKSLLEDLSAQKGELNAQVSEKKAQLGRLK
QEILQEEDNLQTLASQINKLKSELKHVLEMVQLENNELQGLKLQHNQKVDEMENIQTTLL
EGKLELENLQRTSQRLNGEVERQRQVLEKDHREMELLMTQMHTLQENVASLGSDKARVEE
SSQQLEKKLAQATKTLAATEENNRAASSNAEKLASEIKRLQKEIDQLHKQKHSLRQEGSV
VQQQVQDRTDELNLLKDELNDTREQLKLIEQDLRNATRARDEMLREKTTLQAAIEESSAR
YKSLQDKEARKEQQLSHLQRAIEEKEGEMEKHDAVNAWVLKQVLRDLDIQEQQLKESTAK
LKEHRQALEWELANRKTSLEMLNSKVNALEERALQLQQEEKWSAALEESLRSTRHQLEEK
EQALREKASELAEMQKEAEISKADSGRVREQLASQRKNDEKRILLLKDAVKKQRAEYEQA
MQEEKQEKNNLQKQLISVEQAAYDNHERAKRLMRELKQLQSEHTVLRNQLKTQEEVDKRQ
QEVREAMRALKTQVKNEIESGLRDLRCVEERELLGDVEAESNRSLHSRLESLKENFPFSA
NETASQPPHTDRAGRGKDHMMEEHWHGESLREKLQQHEDRLKAQLRQRMSSQADALSRAK
RHTEGTLHSLRRQVEALDELVSNSSAESWLHSQNLSGVNSSLHELSHSPPCQGIHISHVT
DTAGGGTQHFSALYTHHILP
NT seq
7263 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcacttcccctccctgttgcccgcgtctcagcccgccctcctgagttgctgc
gtggatggtgacaccgaccctgccccgcaagtcgtctcccccctatcctccagtgctgct
gcgacactcgccagcgtcgcaccgacacctgaagttaggaatcaacttcacaccaaggga
ggagggaaattaaaaggaggctacgcgttgccatggcaacaccccagcacagaccgactg
cagctgctcctgtggggacaggctgcagcgtatgattggccccatttccttaagatgaag
aaaaatttgaggcctaataagtcgccaaacatgaagtcgccttcctctgcaagtaaagga
aaatcgcctgtggcttataggtcgctggcgtcgggctataacctgctagatgtgacggaa
gaaagtgatgctccggaacatgatggagagaaaacgaggggcaatgaggtgggagttcgc
tatatcacagaatctctgatccagaagcagaccaaacaagaaaacctggcatacgtcacc
tccctgaatctttgccttgcaaaagaaggtggcaaaaaattcaagttcattgagaacctg
gaaaaatgtgaaagacttgaagttctaaacctgagtcataacctgatagagaagatcgag
aagctggaaaagcagataaggctcagagaactcaacttggcctacaacaaaatcagcaaa
attgagcacttcgagcacatgcaaaatctgaaaaaactgaacctggcagggaatgaaatc
gagcacatcccggtttgggttggcaagaagctgaagtctctcaccgccctaaacctgaag
gaaaacaggatctcttcacttcaggatgtttccaggttaaagccattgaaagacctcact
accctctccttgtctgataatcccgtgtccaacctccctcattaccggctctataccgtg
tttcacctgcgctccctgaattccttggatgctcagccagtgaccaatcaggagagacag
gaggcccacgaacgatttaacctagaagagttagagaaactggagagagagctggaaaag
aaaataagtgagattgatgagctgcagaaccagaaagccaagattaccggggagctgcag
aaccaggacgagctgaatagatccctaaagcaagaggcgctgcagcagaaaaagagctac
aaggagctggagcaggagatggaaactaagaacgaaattctgaagcagaagactgtggaa
ttaaccagggcctgccagaaacagtacgagctggagcaggagctggccttctataagatc
gatgccaaattcgagccattggggtactttgaatcagagaatgtggaagtagaagacgtt
cccggggaaagtccttacatcggcaaagccaggtacaaaaggaacatgtatgcccgggaa
agcttcatagcaaaccctgcccagccgttgcagatggggaagatcgagcccgacgaggac
agtcagattagaaaccagcagatccaggccagaatccatacagccctcgatgttgaactg
ggagacaaggagagaaacatccaggcggcgcaagggaaattagcggatctgcagcacgaa
attcttaattctgaaaagcagattttaaaagccacagaggaactgaaagaactggaagat
gccgtggcacaaaaaaagatgtcggaggcggagaaggagagactgcggcagcagctgagc
gggaagatccaactgttgaaccaactgcgccaggaggctctggaactggagaagcagatg
gaatggcagaggagggagatggacaagaagcacagggagatcgaagatcttggcaagcac
ttggcatccctcagccctctggatcccagacattcccacgtgaaggcccagaaggccggt
aaggagcaacagctggatatgatggaccagaactacaggcagctggaagggaggctggat
gatatgctctcccgcatagccaaggaaacggaggagatcaaggatctggaacagcaactt
acagagggccagatagcagccaatgaagctctgaagagggatctggagggcatcatagcg
ggcctgcaggagtacctagagagcgtgaaaggccaggccaagcaggcacatgatgagtgc
cgagagcttcatgcagagagggaagacttactccagagactgacagagttggaggaagag
aagaagcagctggaggcggtggctttggaggctgaaggcatgagaaaagagatcgctgag
ctcgagcacagtcttcaggagcagcaggaactgaacgaatccctgcgccaggctcagggg
gatcttagcgagtacgaggccgaacttgaggcccagctgaaagcccgagatgcggaggcc
aagcagttaaaggaggagctggagaggaggaaacgtctgagccatatggagagctctgca
ttgcaagctgaactggagaaggacaaacaggcgctggagaatgcactgaccaaggcgcag
ttgttggaggagacagatcaagagaatcaaaagctgttgtctcagatggaccaactgcag
ggggaaaacgactatttgaaagagcagcttgagaatttccaagcccagctggccaatgcc
gtggataacttggtccaccccgagcagatcagcgcccgagtgtccgaactgaaacgcaaa
ttgcagacaggagttggtgaaatcaggtgcaccagtcccacggatgtcttgggtaggaac
ctggcagaacttcagcagcagtttaatgagatcctcgccaagtcccaggaagagaaaaag
gaggcgcaggaaaggcagcgcaaactgcaggaggaaatagccgccctccaggagaaagcc
aaggaagcaccggcggagtacaagagggcctgcaacaaggccgccgaagccaagatgcag
gcgctaaagagacagtatgaggcgaagctccggcagctggagaatgaaatccagcggcta
aagggcaaactgaagagcatggaagaaatccaaggcctggcggatcagcagctggtagag
gccgacgaggagcgggagaagcttctatctgaacttcaggatatggagaaccaaagaaaa
atggaagatgccgtggcgcagaagcagttgtctgctctggataaagaactgcgggagctg
aagcgagcggtggctgtctccgataagctggctgcatccgagctgtctaacgccaaggag
cagctgcagtctcttcatggaactgtacttaaaattaaccaggagcgggtggaggaaatg
aaggaagcagaaaacgtcaatactcaggcagagcaggcatctcggaatcttgccaaagcg
gaagcagagattgacctgctgcagaacatcctaaaagaaagagagaaacagctccaggaa
gaaatgcagaatgccgatgccggtatggcaacttccagctaccaacatcaggagatcgag
aaactgaaccacacaatgagaagacagcggggcgaaatcgaccgccttaaacatttactg
gatcatgccagattagataatattgacgagattgagaatctgctggatgagattgagtct
ctcagaaacacccttggctaccagaacgattatatcaccagtatggctgacccattccga
cgaaagggctactggtactatgtgccatccccatcaaatacatctggtccagattctctg
agtaccaaagactctgggcttggcctccattaccccgtgacatcatcaccggccagaaga
aagtgcagccacggccgacataacaagaaggatgagtgcgctcgctgtgcctcggggcat
tgggtctattcacccctcagacacggcacgcgcagggggcacacccacagagatggagaa
gatggcgatggagaagagagtgatgccagtgccacaccccagcgccattttatgccaccc
gctggctctgttatttacactgtgcttccagacggcactcctgcacctcagggaacagtg
gtgtacggacctccgcctccctccagcggcagaccagttgcccctgggactgttatctat
ggcccccctcctgtcggaactcagattatctatggacctcctccaccccatttcaccatc
cctgttatcccagccggggtccttcattgtaacgtgcctgggcatcacaatctggaaaac
gagctgacccgtttggaggacattatcgatcacctcaagtctcggcggcacaaagagaaa
cgatcaaaggaacgtctgcaggaggatatcgacgacctcgagcatcagaaagaaatcctc
aggaaggaagtagaggagctgcgtgtttcgggccagaggcggaagaggaaaaactttgtc
gacgggcacatcggcaccctaattaccgagctggaactggagaagtccttgcagcaccac
gatgagattgaagacgagatagggtgcatagagaagactctcctaaagcgtcgggcggaa
ctcagagaggcagatcggctgctggcggaagcagaggcagagctccaatccacacgggca
aagaccaccgacatcattgaaaagtacacctgtgcaaagaagcacttgagcaccacagag
agcgacgccgaagagctggagcggcgggcacaagagacagccaggcagctggtgaaagca
gatcagcaactcagaatgctgcaacggagcgcctgcgacctggagcagcaccgagcggaa
caagagagcatgctgacggaaataaacagcgtggtatccgaaaaggactctgaattccag
gcactcggcaaaaagattgacacgatgactgaaagtctccagaagctccatgctgatatc
caggtggtagcggccaaggaagccaatcatcttcaggcacttaaggaagcggaatccctg
ctgcaggagaagaaggcagtcctggagcgaatagatgagcaggtatacgcccagcagcaa
gacatagcgggtatggaccgccttctaggtcagaagaaggaggagctgcaccttctgcag
gatcacattgaccataagaaagcagatctgaaggaagtcttacgggacggggaactggat
gtggcggattgcagacaagagatacaagaagtcaagtctctcttggaagatttaagtgct
caaaaaggagagctcaatgcccaagtgagcgagaagaaggcacagctggggcgactgaaa
caggaaatccttcaagaagaagataatctccaaacattggcttcccagataaataagctc
aaatctgagctgaaacacgtgttggagatggtgcaactggagaacaacgaactgcagggc
ttgaagctgcagcacaaccagaaggtggatgagatggagaacatacagacaacccttcta
gaggggaagttagaattggaaaacctgcagcggacctctcaacgcctaaacggggaggtg
gagcggcagagacaagtgctggagaaagaccatagggaaatggagcttctgatgacgcag
atgcacaccctccaggagaatgtggcttccctgggcagcgacaaagcccgtgtggaggag
agcagccagcagctggagaagaagctcgcccaggccacaaaaacactcgcagctacggag
gagaataaccgagcggccagtagcaatgcagagaagttggcgtctgaaatcaaacggtta
cagaaagagatcgaccagctccacaaacagaagcattctctgaggcaggaagggtcggtg
gtacagcagcaagtgcaagatagaacagatgagttgaacttacttaaggatgagcttaac
gataccagggagcaactgaagctaattgagcaggacctgagaaatgccacaagggctcgt
gacgagatgctcagggaaaagaccaccctacaggcggccattgaggagagttcggcgagg
tacaaatctctgcaggacaaagaggcccggaaagaacagcagctgagccacctccagagg
gcgatagaggagaaagagggcgagatggaaaaacacgatgcggtaaatgcctgggtcctg
aagcaagtcctgagagacctcgacatccaggaacagcagctgaaagaatccacggccaaa
ctgaaggagcaccggcaggccctggaatgggaactggccaataggaagacttctctggaa
atgcttaactccaaagtaaatgcgctggaggaacgagccctgcagctccagcaagaggaa
aagtggtcggccgccctagaggaatcactccgcagcaccaggcaccagctggaggaaaaa
gagcaggcgttacgggaaaaggcatcggaactcgcggagatgcagaaggaggcggagatt
tctaaggccgactcgggccgcgtgcgggagcagttggcgtcgcagaggaaaaacgacgag
aagcggatcctgctgctgaaagacgctgtaaagaaacagagggcggagtatgagcaagcc
atgcaggaagaaaagcaggagaagaacaacctgcagaagcagttgatttccgtggaacaa
gcggcgtacgataaccacgagcgggcaaagcgactgatgcgggagctgaaacagctgcag
tcggaacacacggttctgcgcaaccagctcaaaacccaagaggaagtggacaagcggcag
caggaagtgagggaagcgatgagagcgttaaagactcaggttaaaaacgaaatcgaaagc
ggcctgcgagatctgcgctgcgtggaggagcgcgagctcttgggggacgtggaggcggag
tcaaaccgcagcctgcattctcgcctagaaagcctaaaggagaactttcccttctcggcc
aatgaaacagcgtcacagccgccacatacggacagagctgggaggggcaaagatcacatg
atggaggaacattggcacggggaatccctgcgcgagaaactgcagcaacacgaagacaga
ctgaaggctcagctgcgccaacgcatgtccagccaagccgacgccctcagccgcgccaaa
cgccacacggaggggaccctgcacagcctgaggcgccaagtggaggcgctggatgaactg
gtcagtaacagctcggccgagtcttggctgcactcccagaacctctccggggtcaactcc
tccctccatgaactttcccacagtcctccctgtcagggaatccatatctcccacgttaca
gacacggccgggggaggcactcagcacttcagcgctctctatacgcaccacattctgcct
taa
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integrated database retrieval system
