Xenopus tropicalis (tropical clawed frog): 100271766
Help
Entry
100271766 CDS
T01011
Symbol
hes5.4
Name
(RefSeq) transcription factor HES-5
KO
K06055
hairy and enhancer of split 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100271766 (hes5.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100271766 (hes5.4)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
100271766 (hes5.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
100271766
NCBI-ProteinID:
XP_002933895
Xenbase:
XB-GENE-5952810
UniProt:
A0A6I8PZ59
LinkDB
All DBs
Position
7:complement(99500282..99501971)
Genome browser
AA seq
159 aa
AA seq
DB search
MTSAHITQDCSMENPKSKTSLRQIRKPVVEKMRRDRINSSIKQLRMLLEKEFQRHQPNSK
LEKADILEMTVNYLKEHQLQMNAVAFARKSPFQDYNQGYSRCLEETLQFLSHTEMQKPAN
LKLVQHFNRTVPADNNLPQGAPSLKQPSSNTAAIIWRPW
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgcccatattacccaggactgcagcatggagaacccaaaatccaaaacctcc
cttaggcaaataagaaaaccagtggtggagaagatgagacgggaccggataaacagcagc
atcaagcagcttcgaatgttgttggaaaaggagtttcaaaggcaccagccaaactctaaa
ctggaaaaagcagacatcctagagatgacagtcaactacctgaaagagcatcagctccag
atgaatgcagttgcatttgctcggaaaagcccattccaagattacaaccaaggctacagc
aggtgtcttgaagagactcttcagttcctctctcacactgaaatgcaaaaacctgcaaac
ttgaaactggtgcagcattttaacagaactgttcctgctgacaataacctgccccaaggt
gctccaagcctcaaacagccctcatccaacacagcagcaataatctggaggccatggtaa
DBGET
integrated database retrieval system
