Xenopus tropicalis (tropical clawed frog): 100302589
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Entry
100302589 CDS
T01011
Symbol
ago1
Name
(RefSeq) protein argonaute-1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100302589 (ago1)
03036 Chromosome and associated proteins [BR:
xtr03036
]
100302589 (ago1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100302589 (ago1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100302589 (ago1)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100302589 (ago1)
microRNA pathway
RISC loading complex
100302589 (ago1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
100302589
NCBI-ProteinID:
NP_001304144
Xenbase:
XB-GENE-5933499
UniProt:
F6PSN5
LinkDB
All DBs
Position
2:complement(81772788..81800671)
Genome browser
AA seq
857 aa
AA seq
DB search
MEAGPSSAAPSGYVPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGHERVDFEVTIPGE
GKDRIFKVSIKWVAVVSWRMLHEALGSGRIQLPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPP
AGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPT
RIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADRSE
RIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQIL
TYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQAL
AKAVQVHQDTLRTMYFA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggaagctggaccttcttctgcagccccgagtggctatgttccacccctgcagcaagtg
ttccaagccccacgaaggccaggaattggtactgtggggaaacctattaaattacttgcc
aattactttgaggtagacattcccaagattgacgtctatcactatgaggtggatatcaaa
ccagataaatgtcctcgccgtgtaaacagggaagttgttgagtacatggtacagcacttt
aaaccacaaatttttggagacagaaagccagtgtatgatggaaagaagaatatttacact
gtcacagcacttcctattggccatgaacgggttgattttgaggtgactatccccggagaa
gggaaggatagaatttttaaggtatctataaagtgggtggcagtggtgagttggaggatg
cttcatgaggcacttgggagtggacggattcagctacccctggagtctgtgcaagctttg
gatgtagcaatgaggcacttggcatcaatgaggtatacccctgttggacgatctttcttc
tctccacctgagggctactatcaccctcttgggggtgggcgggaggtttggtttggtttc
catcagtctgtgcgtccagccatgtggaacatgatgctcaatattgatgtgtcagcaact
gccttctacaaagcccagcctgtcatagagttcatgtgtgaagtactggatatacgaaac
attgatgaacagccaaaacctctcacagattctcagagagttcgcttcacaaaggagatc
aaaggcttaaaagtagaagttacccactgtgggcagatgaagagaaaatacagggtatgc
aatgttacccggaggccggctagtcatcagacgttccccttacagttggagagtggtcag
actgttgaatgcacagtagcacagtattttaaacagaaatataacctacagctaaagtat
ccccaccttccctgtctccaggtgggccaagagcagaaacacacatacctacctctggag
gtttgcaacattgtagctggccagcgatgtattaagaagctgacagacaatcagacctcc
actatgatcaaagctacagctcgatctgctccagacagacaagaggagatcagcaggctg
atgaagaatgccagttacaatttggatccatacattcaggaatttgggatcaaagtcaaa
gatgacatgacagaggtcactgggcgagtcctcccagcacccattcttcagtacggaggg
agaaacagagcaattgcaactccaaaccaaggtgtctgggacatgcgaggaaagcagttc
tacaatggcattgagataaaagtctgggcaattgcatgtttcgctccacagaagcaatgc
agggaagaagtgctgaaaaattttaccgaccaactccgcaaaatctcaaaagatgcagga
atgccaatccagggtcagccatgcttctgtaaatatgcacagggggcagacagtgtggag
cccatgttccggcacttgaaaaacacatattctggccttcagctcatcattgttattctg
ccagggaaaacacctgtatatgcggaagtgaaacgtgttggggatacattgcttgggatg
gccactcagtgtgtgcaggtgaaaaatgtagttaagacttctcctcagacgctcagcaac
ctctgcctgaagatcaatgtcaagctgggtggtatcaacaacattttagtacctcatcaa
cggtctgcggtcttccagcagccagttatatttcttggagcagatgttacacacccacct
gctggtgatggcaagaagccctctattactgcggttgttggtagcatggatgcccaccca
agccggtactgtgccactgtgagagttcagcgacctcgacaggagatcattgaggacctg
tcttatatggtgagggaattacttatccagttttataagtccacccgcttcaaaccaact
cgaataattttctatcgtgatggggttcctgaaggacaactgccccagatcttgcattat
gagttgctggcaattcgggatgcctgtattaaattggagaaggactatcagcctggaatc
acgtatatagttgtgcagaaacgtcaccacacgcggctgttttgcgctgaccgcagtgag
cggattggaaaaagtggaaacattccagcaggaacaactgttgacaccaacatcacacac
ccttttgaatttgacttttacttgtgcagccatgctggtatccagggaacaagccgcccc
tctcactactatgtgctttgggatgacaacagattcacagcagatgagctgcagattctc
acttaccagctttgccacacctacgtgcgctgtacacgctctgtctcaattcctgcacca
gcctattatgctcgattggtggcatttagagcaaggtatcacttggtggataaggaacat
gacagtggagaaggcagtcatatctctggacagagcaatgggagggacccacaggccttg
gcaaaagcagtgcaagttcaccaggacacactgcgcacaatgtattttgcctga
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