Xenopus tropicalis (tropical clawed frog): 100327246
Help
Entry
100327246 CDS
T01011
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04120
Ubiquitin mediated proteolysis
xtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100327246 (syvn1)
04120 Ubiquitin mediated proteolysis
100327246 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100327246 (syvn1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100327246 (syvn1)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100327246 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-Nse
Endonuclease_7
zf-C3H2C3
Prok-RING_4
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
100327246
NCBI-ProteinID:
NP_001164301
Xenbase:
XB-GENE-1005361
UniProt:
A0A8J0QDB3
LinkDB
All DBs
Position
4:31508437..31529873
Genome browser
AA seq
602 aa
AA seq
DB search
MTGASLALTAAVVAHAYFLKNQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMGKVFF
GQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAEDRVDF
MERSPNISWLFHFRILALMLLLGVLDAFFVSHAYHSLVTRGASVQLVFGFEYAILMTMIL
TVFIKYVLHSVDLQSENPWDNKAVYMLYTELLTGFIKVLLYMAFMTIMVKVHTFPLFAIR
PMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATTEELQAMDNVCIICREEMVTGAKRLP
CNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQPQTPADQQNQHQNQAPQQQTPVIPP
QPNFPPGILPPFPPGMFPLWPPMGPFPPVPGAPGGNPPDEANPGPSTGPSPRPGETSNVG
SDSQPSATLPGFPFPPPFLGMPILPPFGLPPMPMPPAGFTGLTDEELRAMEGHERQNLEA
RLQCLQNIHTLLDAAMLQINQYLTVLASIGPPQPPVPSTSAASASTEPTTSNVSEPVIPK
DTAAAATVTSTEPSQQSAPPAPSNVETVSGEEVEETTTEEPDTVELRRRRLQKLETGTTE
SQ
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtgccagtctggccctcacagctgccgtggtggcccatgcttatttcttgaaa
aatcagttctaccccactgtggtgtacctgaccaaatcaagccccagtatggcagtcctt
tatattcaagcatttgtcttggtttttcttctgggaaagtttatgggcaaagttttcttt
gggcaactaagagctgctgagatggagcatcttctggaacgttcctggtacgctgtgaca
gaaacatgcctggcattcactgtgttccgtgatgatttcagtccacgctttgtggctctc
tttacccttttgctgttcctaaagtgttttcactggctggctgaggatcgtgttgatttt
atggaacgcagtccaaatatttcctggctttttcacttccgtatactagctcttatgtta
ctcttgggtgtgctggatgctttctttgtttcacatgcctatcacagccttgttaccaga
ggggcatctgtacagctcgtctttgggtttgagtatgccattcttatgactatgatcctc
actgtgtttataaaatacgtccttcactctgtggaccttcaaagtgaaaatccatgggac
aacaaagccgtctacatgttatatacagaacttctcacaggttttataaaagtcttgctg
tacatggcttttatgacaattatggttaaagtccatacatttcctctcttcgcaatccgg
cctatgtacttggcaatgaggcagtttaagaaagctgtgacagatgctataatgtcaaga
agagcaataagaaatatgaacactctgtatcctgatgcaacaacggaggagcttcaagcg
atggacaatgtgtgtatcatctgcagagaggagatggttacaggagcaaagcgactacca
tgcaatcacatatttcacaccagctgcttgcgctcttggttccagagacagcagacttgc
cctacttgtcgcatggatgtgctaagagcttctctcccaactcagcctcagacccctgca
gaccagcagaatcagcatcagaatcaggctccacaacaacaaactcctgttattcctcca
cagcctaactttcctcctggtatcctacctcctttccctcctggtatgtttcctctgtgg
cctcctatgggaccattcccgcctgttcctggtgcccctggtggcaatccccctgatgaa
gctaacccaggaccatccactggtccttcgccaagacctggtgaaacatctaatgttggt
tcagattcacagcctagtgcaactctgccagggtttcctttcccacctccttttttagga
atgccaatcctgcctccattcggtctaccacctatgcctatgccccctgctggatttact
ggcttgactgatgaggagttaagagcaatggaaggacatgagagacaaaacctggaagcc
cggctgcaatgtctccagaatatccatactttgcttgatgcagcaatgttacagattaac
cagtacctaacagtcctggccagcataggtccccctcaaccacctgttccctctacatca
gctgcatcagcttctacagagcctactacctccaatgtttcagagccagttatccccaag
gacaccgccgccgccgccactgtgaccagtacagaaccttcccagcaatcagctcctcca
gctccatcaaatgttgagactgtcagtggagaggaggtagaggagaccacaacagaagaa
ccagacactgtagaactaagaaggcgtagacttcagaaactggaaacgggaacaacagaa
tctcaataa
DBGET
integrated database retrieval system
