Xenopus tropicalis (tropical clawed frog): 100329115
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Entry
100329115 CDS
T01011
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
100329115 (srek1)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
100329115 (srek1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100329115
NCBI-ProteinID:
XP_002934235
Xenbase:
XB-GENE-491758
UniProt:
A0A8J0QNC0
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Position
1:complement(187469625..187493533)
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AA seq
566 aa
AA seq
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MSPGQTTVIQVTNLSAAVTSDQMRTLFSFLGDIEELRLYPPDNAPLAFSSKVCYVKYREP
SSVGVAQHLTNTVFIDRALIVVPCAEGKIPEETKALSLLAPAPSLSSLLPGAGLLPIPAP
TPTPPIASSLASVLRREKVEVPLLSVPLTSLGVNLPTPLEPVITTLAPVLPALTPAIPAV
ADLPQPPLMGNVDPTKVDEIRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQ
PTRFAFVEFSDQNSVTRALTFNGVMFGDRPLKINHSNNAIVKPPEMTPQAAAKELEEVMK
RVREAQSFISAAIEPETGKPVEKIKQEHSKTRSRSRSKSRSRRKRSRSKNRSHSRNRSRS
RHKERRRSKSPHKKRSKSKDRRKSKSRSRSRDRKKEKEYKSKGREKEKQKDKYDKKRKEK
RSRSPSKSSSSIRRSQSASREKRKRRSRSLSKSPRTSKTLKRSSRSPSPRSKNRKEKKKG
KERDHNGNRHEREHSGSQKRSKVQERKEAADHYNTKLSEKHHSKDERNNMKEVLSDSDQG
NSQHNGDCQVTEESPPQTEEMASSSS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgggcagaccacggtcattcaggttacaaacctttctgcggctgttacaagc
gatcaaatgcggactctcttctccttcctgggggatatagaagaactgaggctctatccg
cctgacaatgctcctcttgcattttcctccaaagtttgttatgttaagtatcgcgagcct
tcgagcgtcggcgtggcccagcacctaactaacacggtttttattgacagagctctgata
gttgtgccctgtgcagaaggtaaaatccctgaagaaactaaggcgctttctcttctggct
cctgctccatcattgtcaagcttgcttcctggggctggcctgctgcccattccggcacca
actccaacccctcctattgcatcttcccttgcttcggtgctgagaagagagaaagttgaa
gtaccattgctgagtgttccacttacctcactgggagtaaacttacccacgccgctggaa
cctgttataacaactttagcccctgttctgccggctctcacaccagccataccagcagtt
gctgatcttccgcagccccctctcatgggcaatgtggaccctacgaaagttgatgaaatt
aggaggacaatttacgttggaaaccttaattcccagactacaacggcagagcagctgctc
gagttttttaaacaagtcggggatgttcggtttgttcggatggctggagatgagacccaa
cccacgcgattcgctttcgtagagttttctgatcagaactctgtgacgcgagctcttacc
ttcaatggagttatgtttggcgatcggccactcaaaataaatcactcaaacaatgcgatt
gtgaagccccctgagatgactcctcaagcagcagcgaaagaactggaggaagtgatgaag
cgagtaagagaagcacagtcctttatttcagctgcaatcgaaccagagacaggaaagcca
gtggagaagattaaacaggagcactcaaaaactcgttcgcggtcccgctccaagtcacgt
tccagaaggaaaaggtcacgttcaaagaacagaagccactcacgtaacagatcccgttcc
aggcacaaagagcgtcgcaggtcaaaaagcccacataagaagcgttctaagtctaaagat
cgtcgcaagtcaaaaagccgctcacgctccagggacagaaagaaggagaaggagtacaag
agcaaaggccgggaaaaagagaaacagaaagacaaatatgataaaaaaaggaaagagaaa
aggtccagaagtccttccaagagcagctcttccattagaaggtctcagagtgccagcaga
gaaaagcgcaaaaggagaagcaggagtctttcaaaatcaccaagaacttccaaaacatta
aagagatcttctagatctccatctcctaggagcaaaaataggaaagaaaaaaaaaaagga
aaagaacgggaccacaatggcaacagacatgaaagggagcactcgggttcccagaaacgc
agtaaagtccaagagagaaaggaagcagctgatcattacaacactaagctatctgaaaag
catcacagtaaagatgaacggaataacatgaaggaagtcctcagcgacagcgatcaaggg
aattcacagcacaatggggactgtcaagttacagaagaaagccccccacagacagaggaa
atggcaagttcatcatcctag
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