Xenopus tropicalis (tropical clawed frog): 100329186
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Entry
100329186 CDS
T01011
Symbol
nlgn1
Name
(RefSeq) neuroligin-1 precursor
KO
K07378
neuroligin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecule (CAM) interaction
xtr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100329186 (nlgn1)
04517 IgSF CAM signaling
100329186 (nlgn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100329186 (nlgn1)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
100329186 (nlgn1)
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Ortholog
Paralog
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Motif
Pfam:
COesterase
Abhydrolase_3
BD-FAE
Motif
Other DBs
NCBI-GeneID:
100329186
NCBI-ProteinID:
NP_001165297
Xenbase:
XB-GENE-6041753
UniProt:
D2X2K4
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Position
5:complement(110269940..110684196)
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AA seq
837 aa
AA seq
DB search
MGLDSTFVLCVFGFLLHIATVRSQKLDDVDPVVLTTYGKVRGFKKELNNEILGPVVQFLG
VPYAAPPIGERRFQPPEPPTMWGDIKNSTQFAPVCPQNIVGGRLPEVMLPVWFTNNLDVV
SSYVQDQSEDCLYLNIYVPTEDVKRISKECARKPGKKICRKEGPLTKKQTDDLGDNEGAE
DEDIRDSGGPKPVMVYIHGGSYMEGTGNVFDGSVLASYGNVIVITVNYRLGVLGFLSTGD
QASKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGASCVNLLTLSHYSEGNRWS
NSTKGLFQRAIAQSGTALSSWAVSFQPAKYARILATKVGCNMSDSGELVECLQKKPYREL
VDQDIQPVRYHIAFGPVIDGDVIPDDPQVLMEQGEFLNYDIMLGVNQGEGLKFVESTVDH
EDGVSSSDFDFAVSNFVDNLYGYTEGKDILRETIKFMYTDWADRNNPETRRKTLLALFTD
HQWVAPAVATADLHSNFGSPTYFYAFYHHCQTDQVPAWADASHGDEIPYVFGIPMIGPTE
LFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWTRYSQKD
QLYLHIGLKPRVKEHYRATKVNLWLELVPRLHVMNDLTTTKGPSTDITSKPTGSNTVPVT
SAFPTVSEDNFKQKPSSISLERDYSTELSVTIAVGASLLFLNILAFAALYYKKDKRRHDV
HRRCSPQRTTANDIAHAQEEEIMSLQMKHTDLDHECESIHPHEVVLRNACPPDYTLAMRR
SPDDIPLMTPNTITMIPNTIPGIQPIHAFNTFTAGQNNTLPHPHPHPHPHSHSTTRV
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgggattggattcaacatttgtactctgtgtatttggatttttacttcacattgcgact
gtgcgctcacaaaaattggatgatgttgaccctgtagtcttaacaacatatggcaaagtc
agagggtttaaaaaggaacttaataacgaaatactaggacctgtcgtccagtttcttggg
gttccttatgctgctccaccaataggagagaggcggtttcagccccctgaacctccaaca
atgtggggagatataaaaaattccacccagtttgcaccagtttgtcctcaaaacattgtg
ggcggcagattgcctgaagtcatgcttccggtttggtttactaataacttggatgtagtt
tcttcctacgttcaagaccagagtgaggactgtctctatttaaacatatatgttccaaca
gaggatgtaaaaagaatatccaaggaatgtgcccggaaacccggcaagaaaatatgtaga
aaagaaggtccccttacaaagaaacagacagatgatttaggtgataatgaaggtgctgaa
gatgaagacatccgagatagtggcgggcccaagcctgtgatggtgtatattcatggaggc
tcttacatggaaggcactggaaatgtgtttgatggaagtgttctggcaagttacggaaat
gtaatagtcatcaccgtcaactaccgccttggggttcttggttttctaagcaccggtgat
caagcttcaaagggaaattatggtctgttagaccttattcaagccttacgatggactagt
gagaatattggcttctttggaggtgatccattaagaataacagtttttggatcaggtgct
ggtgcttcttgtgtcaatcttttgactctttcccattattcagaaggtaaccgctggagc
aattcaaccaaaggactttttcaaagagcaattgcacaaagtggaacagccctttctagt
tgggcagttagcttccagcctgccaaatatgctcggattctggccacaaaagttgggtgc
aacatgtcagattcaggggagcttgtggaatgtctacagaagaagccttatagagaactt
gtagaccaagacatacagccagtgcggtatcatatagcatttggcccagttattgatgga
gatgttatacccgatgacccacaggtattgatggaacaaggtgaattcctcaactatgat
atcatgttgggagttaatcagggagaaggccttaaatttgtagaaagtactgtggatcat
gaagatggtgtttcaagcagtgattttgactttgcagtttccaattttgtggataatttg
tatggctatacagaaggtaaagatatactgagggaaacaatcaagtttatgtacacagat
tgggcagatcgtaataatccagaaaccagaagaaaaacattgttggctttgtttacggac
catcaatgggttgcaccagctgtggcaactgctgatctacattcaaactttggttcaccc
acatacttttatgccttttatcatcattgccaaacagaccaagtgcctgcttgggcagat
gcatcccacggagatgaaattccatatgtgtttgggattccaatgataggtcctacagag
ttatttccatgcaacttctctaagaatgatgtcatgcttagtgctgtagtgatgacatat
tggacaaactttgccaaaactggtgatccaaatcagcctgtgccacaggatacaaaattc
atacatacaaaaccaaacagatttgaagaagttgcttggactagatattcacagaaagac
cagctctatcttcacattgggttaaaacctagagttaaagagcactatagggcgaccaaa
gtgaatctttggttagagcttgtaccacgccttcatgttatgaatgacctgaccacaact
aaaggcccttctacagatataacatctaagcctacagggagcaataccgtaccagtaaca
tcagcctttcctactgtcagtgaagataattttaaacaaaagccaagctcaatttcattg
gaaagagactattctactgagctcagtgttacaattgcagtcggagcatcactgcttttc
cttaacattttggcatttgcagcattatactacaagaaggataaaaggagacatgatgtt
catcggaggtgtagcccccagcgcactacagcaaatgatatagcccatgcacaagaagag
gaaataatgtctttacaaatgaagcacacagacttagatcatgaatgtgaatctatacat
ccacacgaggttgtccttagaaatgcctgccctcctgattacacgcttgcaatgagaaga
tctccagatgacatccctttaatgacacccaatactataacaatgattcctaacactata
ccagggattcaacccatacacgccttcaatacttttactgctggacagaataacactcta
ccccatccccatccacacccacatccacactcacattctacaaccagagtatag
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