Xenopus tropicalis (tropical clawed frog): 100379668
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Entry
100379668 CDS
T01011
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100379668 (chd7)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100379668 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
100379668
NCBI-ProteinID:
XP_002936158
Xenbase:
XB-GENE-877230
UniProt:
A0A8J0QNT2
LinkDB
All DBs
Position
6:117133718..117218693
Genome browser
AA seq
2969 aa
AA seq
DB search
MADPGMMSLFGEDGNLFSEGLEGLGECGFPENPVNSMAQQMPMDQGFGTLQSPLHHSTSN
QNQSKLTHFDHYNQYEPQKMHMIDQPNRMMANTPGNGIASPHSQYHNTPVPQVPHGGGQM
GVYPGMQNDRHGPSFVDNGSMWGPRAVQVPDQIRPPYQQQSQQQQPAPSGPQGPPHPQHV
QQMGNYMVRGDFSMQQHGPLQSQRMNQFSQGQEGLNQGNPFLGASGPGHLSHVPQQNPNM
GSSLRHTVQQFHHHPPTTLHGESVAHSPRFSPNPSQQGAVRPQSLNFNSRNQTVPSPTLN
NSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMTPSVPRYPNAVGFPSNSSQGLMHQQ
PIHPSGSLNQMNPQTMHPSQPQGTYASPPPMSPLKAMSNPAGTPPPQVRPGSAGIPMDVG
SYPNMPHPPPTHQPPGSMGMGQRNIGPRNIQQSQAFMGMSSAPREMGGHMRPNGCPGVSH
ADPQAIQERMMSGQQHPGHQSFQQQMANCQPHPAMHHQSSPPSHSHHQPWTSLHQSPQNT
PQKVPVHQHSPSESFLDNSVPDMTRISGPNASLMNTEDFLPSMQSQTPQKKRKKKNNHIA
TDKTVGGFGLEGFPGENSDLLIDGAPDGKKKKKPKVKKEPKEPKEPKAKKEPKEPKAPKQ
PKPPKEPKEKKVKTTTPKPKASKKTSNKSDAEGSAQKKKVNKVKPEGVEPLDLDKTPPPS
SPPPPPEEEDDSGVQKRRSSRQVKRKRYTEDLEFKISDEEPDDADGRDSPSNTSQSELQD
GLDAEGPVVEKIMSCRLTKKQLESGEEVEIEEFYVKYKNYSYLHCHWATLEELEKDKRIQ
QKIKRFKAKQGQNKFLSEIEDDLFNPDYVEVDRILDVATSTDENGEPVCHYLVKWCSLPY
EDSTWELKQDLDQAKIEEFEKLQSREPETERVERPPADDWKKSESSREYKNNNSLREYQL
EGVNWLLFNWYNKRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWER
EFRTWTELNVVVYHGSQASRKTIQLYEMYFKDPQGKIIKGAYKFHAIITTFEMILTDCPE
LRNIHWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLNFLEP
DRFPSESNFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNI
QKKYYRAILEKNFAFLSKGGGGGHANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFRE
THNCDPSDFQLQAMTQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRY
PYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQ
NDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNATNG
VQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILSRRTHTITIESEGKGSTFAK
ASFVASGNRTDISLDDPNFWQKWAKKAELDLDVLNGRNTLVIDTPRVRKQTRLFSAVKED
ELMEFSDLESDSEDKPSIKPRRPQDKSLGYARSECFRVEKNLLVYGWGRWTDILSHGRFK
RQLSEQDVETICRTILVYCLNHYRGDENIKGFIWDLITPTEDGQTRALVNHSGLSAPVPR
GRKGKKVKSQNSQPVLKHADWLQSCNPDTLFQEDSYKKHLKHHCNKVLLRVRMLYYLRQE
VIGDQADKILEGADSSEVDVWIPEPFHAEVPTDWWDNEADKSLLIGVFKHGYEKYNSIRA
DPALCFLERAGMPDAKAIAAEQRGTDMLADGGDGGDFDREDEDPEYKPARLPFKDDIDEF
ANSPLEDKEEEMEPTGKSGEGSTELGHLYWPNTSSLTTRLRRLITAYQRSYKRQQMRQDA
QMKIDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVVSTFGVIFDNAKQKFD
WNQFRAYARLDKKSDESLEKYFSCFVAMCRRVCHMGTKPDEDICDLSMLIEPITEERASR
TLYRIELLRKIREQVLNHPQLNERLKLCQPSIDLPEWWDCGKHDRDLLVGAAKHGVSRTD
YHILNDPELSFLEAHRSFAQNKGSSQPSNLPILIPPGPGYSDTPPIMPSTPNPDEKGSGN
EEAITEKVEDPVIKEEAEVKEEQAEDTAEKSIKQESDLEAIPVKDEIKMTEETPVGPKSI
SEKGSEEDDEKLDYDDKSEESSQAEVGIASQDKNFDEESNASLSTARDETRDGFYLEDGE
QSGLHMLRERTFSFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDFPGLLPGYTPTA
VDSPLQKRSFAELSMVAQGSYSGSEDISASPQVSQETALSLSVPRQRRRRRRKVEVEAER
AAKRRNLMEMVAQLRGSQMGAENGQEKVVDLSNASREATSSTSSFPSLTSQFLLNNSSTP
VSDAFKTQMERLQAGLSCTPTRHLLNGSLIDGEPPMKRRRGRRKNVEGLDLLFMSNKRTS
LSVDENDVTKAYDEDIETPPTRNIPSPGQLEPETRIPVINLEDGTRLVGEEAPKNKDLVE
WLKLHPTYTVDMPSYVPKTADMLFSHFQKPKQKRHRCRNPNKLDINTLTGDERVPVVNKR
NGKKMGGAMAPPMRDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVREEG
ASRRGRRPKSEIAKAAAAAAVASTSGINPLLMNSLFAGMDLASLQNLQNLQSLQLAGLMG
FPPGLAAAAAAGGDSKNPAAMLPLMLPGMAGLPNMFGLGGLLNNPLAAGSSNSTTASSQG
ETEDGTSKADEKKTETEEDAKDSEKTDNVSATDSVGAATTTAGLSTNPLAFSPFLLSTMA
PGLFYPSMFLPPGLGGLTLPGFPSLAGLQSAVSSSEEKAADDCENQEPSDAEESMDKTAD
SSILEDETAQGEEAESPDGEPELDNENNK
NT seq
8910 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccctggcatgatgagtttgtttggagaggatgggaacctttttagtgaagga
ttagaaggtctaggtgaatgtggcttcccagaaaatcctgtaaattccatggcacagcaa
atgcctatggaccagggatttggcacacttcagtcaccgctccatcacagtacaagcaat
caaaaccaatctaagctgacacattttgatcactataaccaatacgaaccacaaaaaatg
cacatgatagaccagcctaacagaatgatggcaaacactcctggaaatggtattgcctct
ccacattcacagtatcacaacacacctgttcctcaagtcccccatggaggtggccaaatg
ggtgtgtaccctggtatgcagaatgaccgacatgggccatcttttgtggacaatggctct
atgtggggacccagggctgtgcaggtgccggaccagatacgaccaccttaccagcagcag
tcacaacagcagcaaccagcaccttccggaccccaaggtcctcctcaccctcagcatgtt
caacagatgggaaattatatggtgcgaggagatttttcaatgcaacaacatggtccacta
cagtcacaaaggatgaaccagttttcacaagggcaagagggtcttaatcagggaaatcct
ttccttggtgcttcaggaccaggtcacttgtcacatgtgccccagcaaaatcctaacatg
ggatcttctctacgtcatacagtacaacagtttcatcatcaccctcccactactctgcat
ggggaatctgttgctcacagtcctcgattttctcctaatccttctcagcagggtgcagtg
aggccacagtcccttaattttaattctcgtaaccagactgtaccttcacccacgttaaac
aactcagggcagtattcccgatatccttatagtaaccttaatcagggattagttaataat
acagggatgaatcagaatttaggccttacaaacaacactccaatgactccatctgtacct
agatacccaaatgctgtggggtttccatcaaatagtagtcaaggactgatgcaccagcaa
cctattcatcctagtggctcacttaaccaaatgaacccacaaactatgcatccttcacag
cctcagggaacctatgcttctccacctcccatgtcaccactgaaagcaatgagtaaccca
gccggtacccctccaccacaagttaggcctggcagtgctgggatacctatggatgttgga
agttacccaaatatgccccatcctcctccaactcaccagccccctggcagcatgggtatg
gggcaaaggaatatcggccctagaaacattcagcagagtcaagccttcatgggtatgtct
tcagcaccaagggagatgggtgggcacatgagaccaaatggctgtcctggagttagccat
gcagatccacaggcaatacaagaaaggatgatgtctggtcagcagcatcctggtcatcaa
tcttttcaacagcaaatggcaaactgtcagcctcatccagctatgcaccatcagtcttca
cctccgtcacattctcatcaccaaccatggacttcgcttcatcagtcacctcagaacacc
cctcagaaagtgcctgtccatcagcattctccttcagaatctttccttgataactctgtg
ccggatatgactcggataagtggccccaatgcttctttaatgaacacagaagatttcttg
ccatccatgcagtcccagacaccacaaaagaaaaggaagaaaaaaaacaaccacattgct
actgataaaactgttggagggtttgggctggaaggtttccctggggaaaactctgacctc
ttaattgacggagcaccagatggaaagaaaaagaaaaagcctaaagtcaaaaaagagccc
aaggagccaaaagagcccaaagcaaagaaagagccaaaggaacctaaggctcccaaacaa
cccaagccccccaaagagccaaaagagaagaaggtgaagacaaccacgccaaaaccaaag
gcaagcaaaaagaccagcaataagtcggatgcagagggcagtgctcagaagaaaaaagtt
aataaagtgaaaccagaaggggttgaacctttagatttggataaaaccccacccccttct
tctccccctcctcctccagaagaggaagatgactcgggagtacagaagaggcgctctagc
aggcaggttaaaaggaagcgctacactgaagacctagaatttaagatttcagatgaagag
cctgatgatgcagatggaagagactctccttccaacacatctcagtcggagctgcaggat
ggactagatgctgaaggacccgtggtggagaaaatcatgagttgccggttaacaaaaaaa
caactggaatctggtgaagaggtggagatagaagaattctatgtgaaatataagaactac
tcatacttgcactgccattgggctactttggaagaactggagaaagacaagaggatccaa
cagaaaataaagcgatttaaagcaaagcaagggcaaaacaagtttctttcagagattgag
gatgatctgtttaatcctgactacgttgaagttgatcggatactggatgtggctaccagc
acagatgaaaatggagagcctgtctgtcactacttggtgaaatggtgttcccttccgtat
gaagacagcacttgggaactgaagcaggacttggatcaagcaaagattgaagaatttgag
aaacttcagagcagggagccagaaacagagcgcgtggagcgacctcctgccgatgactgg
aagaaatctgagagttccagggagtataaaaataataacagtctcagggaataccagttg
gagggagtaaactggctgctgttcaattggtacaacaaacgaaattgcattttagcagat
gaaatgggtttggggaagacaattcagtcgatcacttttctgtatgagatatacttaaag
ggaattcatgggccctttttggtcattgctccactgtcaacaatcccaaactgggaaagg
gagtttcgcacttggacagagttgaatgtggtcgtttatcatgggagtcaagcaagcagg
aaaactatacaactttatgaaatgtacttcaaggatccacagggaaaaattataaaaggg
gcttataagtttcatgcgatcattacaacatttgaaatgattttaacggactgccccgag
ctcaggaacatccattggcgatgtgtggttattgatgaggctcatcgactgaagaacaga
aactgtaaacttttggaaggcctgaagatgatggatctggagcacaaagtactgctaaca
ggaactcctttacaaaacaccgtggaggagctttttagtctgcttaactttttggaacca
gaccgttttccttcagagagcaatttcatgcaagaatttggagatttgaaaactgaagaa
caggtgcaaaaactccaaggcattctaaaaccaatgatgctgaggcgcctcaaggaagat
gtggaaaagaatctggctccaaaagaagaaaccataatagaagtagagctgacaaacatt
cagaagaaatattatcgtgcaattcttgagaagaactttgctttcctctccaagggtggt
ggaggtggtcatgcaaatgtccctaatcttttaaacactatgatggaactccgaaaatgc
tgcaatcatccttaccttataaatggtgctgaagagaaaattttggaagagtttagagaa
acgcacaattgtgacccttcagattttcagcttcaggcaatgacccaagccgctggcaaa
ctagttctgattgacaagctgctgccaaagctgaaggctggtggccacagggtgcttatc
ttttcacagatggtgcggtgcttggacatactggaagactacctcattcaacgaaggtat
ccatatgagagaattgatggcagagtaagaggcaaccttcgtcaggctgctattgacaga
ttttccaaacccgattctgataggtttgtgttcctgctatgtacaagggcaggaggtctg
ggcattaatttaactgctgctgatacttgcattatctttgattctgactggaacccccag
aatgaccttcaggctcaagcgcgatgccatagaataggccaaagtaaatctgtgaaaatt
tacagactgatcactcggaattcctatgagagggaaatgtttgataaggccagtttaaag
cttgggctggataaagcagtcttgcagtccatgagtggaagagacaatgctaccaatggg
gtgcaacagctatccaaaaaagaaatcgaagacctgctgcgtaaaggtgcttatggagca
ctgatggatgaagaagatgaaggctccaaattctgtgaagaagatattgatcaaattctc
tctcgtcgcactcatacaataacaatagagtctgaaggaaaggggtctacgtttgcgaag
gctagttttgttgcatctggaaacaggacagacatttctctggatgatcccaatttctgg
caaaaatgggcaaagaaagctgaactggatcttgatgtactaaatggaaggaacacttta
gtaattgacacgccacgagtaagaaagcaaaccagactgtttagtgcagtgaaggaggat
gagctcatggaattctctgatctggagagcgattctgaggacaaaccaagtatcaaacca
cgaaggcctcaggataaatctctgggctatgcaaggagtgaatgtttcagagttgagaag
aatcttctagtatatgggtggggccgatggactgacatactctcacatggccgattcaaa
cgtcagctttctgagcaagatgtggaaaccatctgccgtaccattctggtctactgtctc
aaccattacagaggggatgaaaacatcaaaggtttcatatgggacctgattacaccaaca
gaagatggacagacaagagctttggttaatcactcaggtctgtctgcccctgtgcccagg
ggaaggaaagggaagaaagtaaaaagccagaattcacagcctgtgttaaagcatgccgac
tggctccagagctgtaaccccgacaccttgtttcaagaggacagctacaaaaagcacctg
aagcatcactgtaacaaggtcctgctgcgtgtccgcatgctgtactatttgaggcaagaa
gtgataggggaccaagctgacaaaatcttggagggtgctgactcaagtgaggtagatgta
tggattccagagccattccatgctgaggttcctacagactggtgggacaatgaagcagac
aaatcccttttgattggtgtcttcaagcatgggtacgagaaatacaattctatccgggcc
gaccctgctctgtgcttcctagagagagctggtatgccggatgctaaggcaattgctgct
gaacagcgaggaacagatatgctggcagatggcggagatgggggtgactttgatcgagag
gatgaggatccagaatacaaaccagcaaggctaccatttaaggatgacattgatgaattt
gccaattctccactggaagataaagaagaagaaatggagcctacaggaaaatctggagaa
ggcagcacagagttaggtcatttgtactggcccaacacttcatccctaaccacccgcctt
cgacgcctcatcactgcttatcagcgcagttataaaaggcaacaaatgaggcaagatgca
caaatgaaaatcgaccgacgtaggcggcgtcctcgggaagaagtaagggccctggaagct
gaaagagaagcaataataacagaaaaacgccaaaagtggacaaggagagaagaggcagat
ttctatcgtgtagtatctacatttggagttatttttgacaatgccaagcaaaagtttgac
tggaatcagttcagagcttatgcccgcttggataaaaaatcagatgagagcttggaaaaa
tactttagctgctttgtggctatgtgtaggagggtttgtcacatgggaactaaacctgat
gaagatatttgtgatctttctatgttgattgaacctataacggaagaacgtgcatcgaga
acactttatcgcattgagcttttgaggaaaataagggagcaggttcttaatcacccccaa
ttaaatgagaggcttaaattatgccagcccagtattgatttgccagaatggtgggactgt
gggaaacacgacagagacttgcttgttggtgcagctaaacatggagtcagtaggacagat
tatcacatcctgaatgatccagaactttcttttctggaagcccacagaagttttgctcaa
aacaaggggtcttcccagccaagcaatctgcccattctaattccacccggacctggttac
agtgacacaccacctataatgccttcaacccctaatcctgatgaaaagggctcaggtaat
gaagaggcaataactgagaaggttgaagatcctgtaattaaggaagaagcagaagttaaa
gaggagcaagctgaggacactgctgaaaagtctataaaacaagagagtgatctggaagcc
attcctgttaaagatgaaattaaaatgacagaagagactccagttggtccaaaatccatt
tcagaaaaaggttcagaggaagatgatgaaaaactggattatgatgacaaatctgaggag
tcctcccaggcagaagtgggtattgcgtctcaggataaaaattttgatgaagaaagcaat
gcttccttgagtaccgcccgtgatgaaaccagagatggattctatttggaggatggcgaa
caatctgggttgcatatgcttcgtgagaggaccttctctttctctttctggcccaaggac
cgtgtaatgatcaaccgattagacaacatctgtgaagctgtgctgaaaggaaagtggcca
gtaaacagacggcagatgtttgacttcccaggactcctccctgggtacacaccaactgct
gtggacagccccttgcaaaagagaagctttgctgagctctccatggtggcgcaaggcagc
tatagtggcagtgaagacattagtgcttcaccgcaagtctcccaggaaactgcactgagc
ttatctgtgccacgtcagcgaagacgaaggagaaggaaggtagaggttgaggcagagcgg
gctgcaaagagaaggaatctaatggagatggtggctcagttgagaggatctcaaatggga
gcagaaaatggacaagaaaaagttgtagatttatcaaatgcctccagggaggctacaagt
tctacctcaagttttccatctcttacttctcaatttttgttaaataattcatccacccca
gtttctgatgcctttaaaactcaaatggagcgactgcaggcaggtctttcatgcacacca
acaaggcatctactcaatggctctttaattgatggtgaacctcccatgaaaaggcgaaga
ggaagaaggaaaaacgttgaaggcctagatcttttgtttatgagtaacaagaggacttcg
ttatctgtggatgaaaatgatgtgaccaaagcctatgatgaagatatagaaaccccgcca
actagaaacattccatctcctgggcagttggagccggagacccgtatccctgtcattaat
ttggaggatgggaccaggctagtaggggaagaagctcccaaaaacaaagatctagttgaa
tggttaaagttacatcctacatacactgttgatatgccaagttatgtaccgaagactgca
gatatgttgttctctcactttcaaaagcctaaacagaagcgacacaggtgccgaaatcct
aacaagttggatattaacacactgacaggggatgaaagggtacctgtggtgaacaaacgc
aatgggaaaaagatgggaggagccatggcaccacctatgagagaccttccacgatggctg
gaagaaaaccctgaatttgcggttgccccagactggacagatatcgtaaagcaatctggt
tttgtaccagagtcaatgtttgatcgtcttctaactgggcctgtagtaagagaagagggg
gctagcaggagaggaagaaggccaaaaagtgaaattgccaaagcagctgcagctgctgct
gtagcctcgacatctggaatcaacccactgctgatgaatagcttatttgctggaatggat
cttgctagccttcagaatcttcagaatctgcagtctctccaacttgctggtctaatgggt
tttccccctgggcttgcagcagctgctgctgctggaggtgattctaaaaatcctgctgcc
atgctgcctctaatgctgccaggcatggcagggttgccaaacatgtttgggcttggtgga
cttttgaataaccccttagcagctggcagcagtaattccactacagcttccagtcaagga
gaaactgaagatggcacttcgaaggctgatgagaagaagacagaaactgaagaggatgct
aaagactctgagaaaacagacaatgtttctgctactgactctgttggtgctgctactacc
acagctggattgtccacgaatcctctggccttcagtcccttcctactctccacaatggct
ccaggcctgttctacccatccatgtttctacctcctggtttaggaggattgacactaccg
ggtttcccatcattagctggacttcagagtgctgttagctcaagtgaagaaaaggctgct
gacgactgcgagaatcaggaaccgagcgacgcagaggagagcatggataaaacagccgac
tcatccattttggaagatgaaacggctcaaggagaagaggcggagtccccagatggggaa
cctgaattggacaatgaaaacaataaataa
DBGET
integrated database retrieval system
