Xenopus tropicalis (tropical clawed frog): 100379684
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Entry
100379684 CDS
T01011
Symbol
sclt1
Name
(RefSeq) sodium channel and clathrin linker 1 isoform 1
KO
K25400
sodium channel and clathrin linker 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100379684 (sclt1)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100379684 (sclt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCCAP
SelB-wing_1
Motif
Other DBs
NCBI-GeneID:
100379684
NCBI-ProteinID:
NP_001186859
Xenbase:
XB-GENE-949205
UniProt:
A0A8J0QFL2
LinkDB
All DBs
Position
1:63974321..64044317
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AA seq
686 aa
AA seq
DB search
MTTLENEFLREEVQKLRSALKRYEDKNYGGHSVDQDGDFLREDNNATSRMNERRSLGLQN
EEIDKYPEEFIEQLHFYQGEMGKIRLKIENVTKENERLHEQLKESLEKQLESIPSGFTTE
AFTEQELIKNLQEQLQLANQEKEDALELWQNVSQEMDRLQQQYQGHITQAHLHVAERQKQ
QEQLAHLEQLNKQLLEAKEKAELTNQQFLHTVNKQQLEREQLGNQLRQAKQESRIATVKL
EETTKLIENLQEQLQRKEEDEVAAKAKEEASEKRVQHIQSAFTQLETRLKVAVQDVEKFK
DERIALEKHIGELQAKCAEVEEEKYDAVSRVRDSMQILEEANLQKDQALLREKQKEEEIE
NMKEGMNKIIQEAAARTRKEVENTRKLFNVQIARLTEELSAAQMECGDKQSQLERAMRER
RAAEEELAKVYRDGQLNEKDYRKQEELHQRFLNAERMKDDLQIRLHAAQNKIKQMELNFS
EDLSRCHETMEKLNKTLESERESSNSVSEERLKLVQENEQLRKEVDEWRKTATEVQQKVK
FQISTLEHEFSVKEQGFEVQLQEMEDSKRNSINELRRLLLAQQKATNQWKEEARKITEST
EARLGNLRTELKRQKRHSEELLSRLHTAQEQKAEFENVILEYQEKANRLQKRLDQAEERA
LTASKQLNLIASQRRTAAHKVDLQNM
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccttggaaaatgagtttctcagagaggaagtccagaagctgaggtctgcgctt
aaacgatatgaagataaaaattatggtggacacagtgttgaccaggatggtgattttttg
agagaggataataatgcaacatctcgaatgaatgaaagacgaagtttaggtctacaaaat
gaagaaattgataaatacccagaagagtttatagaacaacttcatttttatcagggtgaa
atgggtaagatacgattaaagattgaaaatgttactaaggaaaatgaaaggcttcacgag
cagctaaaggaatctttagaaaagcagctggaatctattccttctggtttcaccactgaa
gcatttactgagcaagaactgattaaaaacctacaagaacaattgcaacttgcaaatcaa
gaaaaagaagatgccttagagctgtggcaaaatgtttcacaggaaatggatcgtttgcag
cagcaatatcagggtcacataacccaggctcatctacatgtggcagagagacaaaagcaa
caggaacaactagctcatcttgaacaacttaataagcaactccttgaagcaaaagaaaaa
gcagaattgacaaaccaacagtttctgcacactgtaaataagcagcaattggaaagagag
caacttggaaaccaattaaggcaggcaaaacaagagtcacgaatagcaactgtgaagcta
gaagaaactactaaactaatagaaaatctgcaggagcagctgcaaagaaaggaagaagat
gaggtggctgctaaggcaaaggaggaagcttcagaaaaacgagttcagcatattcagtct
gctttcacacagttagaaaccaggctaaaagtagctgtccaagatgtagaaaaatttaaa
gatgaacgaattgcactcgaaaagcacattggggaattacaagcaaaatgtgcagaagtt
gaagaagagaaatatgatgctgtttccagagtccgtgacagtatgcaaatattagaagaa
gctaacctacaaaaggaccaggctctgctaagagaaaagcaaaaggaagaggagattgaa
aatatgaaagaaggcatgaataaaataattcaagaagctgcggcaagaacgcggaaagag
gtagagaatacaagaaaactgtttaatgtgcagattgcacggttgactgaagaactttca
gctgctcagatggaatgtggagataaacagagccagcttgaacgtgcaatgagagagagg
cgtgcagcagaggaagaacttgcaaaggtctatcgtgacggtcaactaaatgaaaaagat
tatagaaaacaggaggagctccaccagcgatttctaaatgctgagcgtatgaaagatgac
ctccagataaggctgcatgctgcacaaaataaaattaagcaaatggagctcaactttagt
gaggatttgtcccgatgccatgaaacaatggagaagctcaacaagactttagaatctgaa
agagagagcagtaattctgtaagtgaagaaagactgaaacttgtgcaggagaatgaacag
ttacgaaaagaagtagacgaatggcggaaaactgctacagaggtgcaacaaaaggttaaa
tttcagattagcacactagagcatgagttttctgtgaaggagcaaggatttgaagtacaa
ctgcaagagatggaagacagcaaaagaaattctataaatgagctgaggaggcttctgttg
gctcagcaaaaagcaaccaaccaatggaaggaggaagcaagaaaaataacagagagtaca
gaggccaggctggggaatctgcgaactgaattaaagagacaaaaacggcacagtgaagaa
ctgctgtctcggttacacacagcacaagaacaaaaggcagagtttgaaaatgtaatatta
gaatatcaggagaaagcaaacagactacaaaagcggctagaccaagcagaagagcgggcg
ctaacagcttctaaacagctcaatctcattgcatcacagagaagaacagcagctcacaaa
gtagatctacaaaatatgtga
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