Xenopus tropicalis (tropical clawed frog): 100379715
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Entry
100379715 CDS
T01011
Symbol
plcd4
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 isoform X1
KO
K05857
phosphatidylinositol phospholipase C, delta [EC:
3.1.4.11
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00562
Inositol phosphate metabolism
xtr01100
Metabolic pathways
xtr04020
Calcium signaling pathway
xtr04070
Phosphatidylinositol signaling system
Module
xtr_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
100379715 (plcd4)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100379715 (plcd4)
04070 Phosphatidylinositol signaling system
100379715 (plcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100379715 (plcd4)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
100379715 (plcd4)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
100379715 (plcd4)
Endocytosis
Macropinocytosis
Phospholipase C
100379715 (plcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
EF-hand_like
EF-hand_10
C2
PH
EF-hand_7
PH_12
EF-hand_6
EF-hand_1
EF-hand_5
SOS1_NGEF_PH
EF-hand_PLCG2
DUF4028
Motif
Other DBs
NCBI-GeneID:
100379715
NCBI-ProteinID:
XP_002933984
Xenbase:
XB-GENE-965137
UniProt:
F6RLC5
LinkDB
All DBs
Position
9:82357843..82410013
Genome browser
AA seq
758 aa
AA seq
DB search
MTSPCSARLQLNENLQLMQAGSLMRKVKSRSWKKQRYFKLQEDCMTIWYNSKKTGNTKST
FSISDIETVREGHQSEVLQSIADEFKPELCFTIVFHGRRANLDLVANTPEEAQCWIQGLE
KLIETVTNMDQKDLLDQWICDWFQKADKNKDGRMNFKEVQDLLKMMNVDMSEHHAYRLFQ
MADKSESGTLEGEEFVLFYKALTQRDEVLKIFQDFSKDGKKLTLLEFVDFLQQGQLEEEN
TEELAMDLIARYEPSDTAKKLHAMSIDGFVMYLCSPEGSIFNVAHEQLYQDMTQPLCHYF
ISSSHNTYLMEDQIRGQSSVEGYIRALKRGCRCVEVDTWDGPNGEPIVYHGRTFTSKILF
KDVISAINKYAFRVCDYPVILSLENHCGVEQQDAMAQHLKSILGTKLIMSTLDGRIPTCL
PSPDELRGKILLKGKKIGRLVDSLEEQPDDSVGEVTDEEENVEVEEERNEDKKRAKKSKE
RLSHLLSDCVIYCKSVPFVSFQHSRAHYTLYEMSSVTEYKARKLVREPGNDFVRHNAWQL
MRVYPTGLRTDSSNYNPQEMWNVGCQMVALNFQTAGVEMDLNDGLFRQNARCGYVLKPSF
MRHVETTFNPDQPQSTEGYSPVNLSILVISAQQLPKVENSKEGSIVDPFVRVEIFGVPID
QTKQETKYIENNGFNPMWYETLHFKIHVPELALVRFVVEDYDKTSRNDFVGQYTLPFKSI
KSGYRHIHLLSRDGTKMPPASVFVHVRVTDASQPEQDT
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgacatccccctgctctgcccgcctacagctgaacgagaacctgcagcttatgcaggcc
ggctcccttatgagaaaagtgaaatcccgcagttggaagaaacagagatatttcaaactg
caggaggactgcatgactatatggtacaactccaagaaaactgggaatacaaagtccaca
ttttccatcagtgacattgagacggtgagggaagggcaccagtcggaagtgctgcagagc
atcgcagatgagttcaagcctgagctctgctttaccatcgtcttccatggacgtcgagca
aacctcgacttggtggccaacaccccagaggaggctcagtgctggatccaaggcctggag
aaactgatagagacagtgacaaatatggaccagaaggacttgctggatcagtggatctgc
gactggtttcaaaaggccgacaagaacaaagatggaagaatgaacttcaaagaggtccag
gatctgctaaagatgatgaatgtggacatgagtgagcaccatgcttaccgacttttccag
atggcagataagtccgagtcaggaaccttagaaggagaggagtttgtgctgttttacaaa
gctctgacacaacgtgatgaagtgctaaagatctttcaggacttctccaaggatgggaag
aagctcaccctgttggagtttgtggacttcctacagcagggccaactagaggaggagaac
accgaggagctagccatggaccttattgcacgttatgagccgtcagatactgcaaagaag
cttcatgctatgagcatagacgggtttgtcatgtacctgtgctccccggagggatccatc
ttcaatgtggcccatgagcagctctaccaggatatgacgcaaccattgtgccattacttc
atctcatcctcccacaacacctacctgatggaagaccagatccgaggacagagtagcgtt
gagggatacatcagggcactaaaacgaggctgccgctgtgtagaagtggacacctgggat
ggacctaatggagaacccattgtgtatcacggacgcactttcacatctaaaatccttttc
aaagatgttatttccgccatcaacaagtatgccttcagggtatgtgactacccagtcatc
ttgtccttggagaatcactgtggggtggagcaacaggacgccatggcgcagcacctgaaa
agcattctgggaaccaaactcatcatgagcaccctagacggtcgaattcctacctgcttg
ccgtctcctgatgagcttcgagggaagatcctattaaaggggaagaaaatcggtcgattg
gtagacagcctggaggagcagcctgatgattcggtgggtgaggtgactgacgaggaagag
aatgtggaggtggaagaggagcgaaacgaggataaaaaaagagcaaaaaaatccaaagag
cgcctctctcatctgctatcggactgcgtaatttactgcaagagcgtgcccttcgtcagc
ttccagcactccagagcccactacacactttacgagatgtcgtcggtcacagagtacaag
gctaggaagcttgtcagagaaccagggaatgattttgtgcgacacaacgcctggcagctg
atgcgcgtttaccccacaggactccggacagattcctccaactacaacccccaagaaatg
tggaatgtggggtgccagatggtggcgctgaacttccaaacggctggagtagagatggat
ctgaacgacggcctcttccgacagaacgctcgctgtggctacgtgctgaagccttccttc
atgagacatgtagagaccacattcaatcctgaccaaccgcagagcacggaaggctactca
cccgtcaatctctccatactggtgattagtgcccagcaactgcccaaggttgaaaacagc
aaagaaggttctatagtggatccttttgtgagagtggagatctttggggttcccattgac
caaaccaagcaggagacaaagtacatagaaaataatgggtttaacccaatgtggtacgag
acactacacttcaaaatccacgtccctgaactggcgctcgtcagatttgtggtagaagat
tatgacaaaacctcaagaaatgactttgtcggacaatatactctcccgttcaaaagcatc
aaatccggatatcggcacatccacctcctttcacgggacggcaccaagatgcctcctgcc
tctgtatttgtccacgtccgcgttacagatgcatcgcagcccgagcaagacacgtag
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