Xenopus tropicalis (tropical clawed frog): 100379824
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Entry
100379824 CDS
T01011
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100379824 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100379824 (chrna5)
Ion channels [BR:
xtr04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
100379824 (chrna5)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
100379824
NCBI-ProteinID:
XP_002937929
Xenbase:
XB-GENE-5755296
UniProt:
A0A6I8SMR3
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Position
3:complement(95366036..95387615)
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AA seq
476 aa
AA seq
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MLLPGTEQKDCVIQRMPWCAEYLLWLFLCLDILHGACGISEPSYIAKSEDRLFKYLFQQQ
DYQRWVRPVEHLNDTVKVKFGLAITQLVDVDEKNQLMTTNVWLKQEWVDVKLRWDPNEFA
GITSIRVPSDSIWIPDIVLYDNADGRFEGSVTKAVVRYDGTINWTPPANYKSSCTIDVTF
FPFDLQNCSMKFGSWTYDGSQVDIILEDYHVDKRDFFDNGEWEIVNATGNKGNRTDGCCF
YPYITYSFIIKRLPLFYTLFLIIPCIGLSFLTILVFYLPSNEGEKISLCTSVLVSLTVFL
LVIEEIIPSSSKVIPLIGEYLVFTMIFVTLSIVLTVFAINIHNRSSATHNAMAPWVRKIF
LHKLPKLLCMRSHVDRYFTRKDETGKVRGPESSRNTLEAALDSIRYITRHVMKEHEVQEV
VEDWKFVAQVLDRMFLWTFLLVSVIGSLFLFIPVIHKWANIIVPVHIGNMYGDKNT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttcccgggactgaacaaaaggactgtgtgatacaaaggatgccttggtgtgca
gagtatttgctttggctgtttctatgcctggatatcctgcatggagcttgcggaatatca
gaaccatcgtatattgccaaaagtgaagaccgattattcaaatatttgtttcagcagcaa
gactaccaaagatgggttcgcccagttgaacacttgaatgatacagtgaaagtgaagttt
ggccttgccattacacagcttgtggatgtagatgaaaaaaatcaactaatgactacaaat
gtatggttaaagcaggaatgggttgatgttaagttgagatgggaccccaatgagtttgct
ggaataacatcaattcgtgtcccctccgattctatttggattcctgatatcgttctgtat
gacaatgctgatgggcgctttgaagggtcggttacaaaagctgtggtgagatacgatggc
accataaactggactccaccagcaaattacaaaagctcttgtaccatagatgtgacattt
tttccttttgatcttcaaaactgctccatgaagtttggctcatggacctacgatggatct
caggttgacatcattcttgaagattatcatgtggacaaaagagacttctttgacaacggt
gaatgggaaattgttaatgcaactggaaacaaaggaaatcgaacagatgggtgctgcttt
tatccatacattacgtattcattcataataaaacgtttaccccttttttacacacttttt
ctaattattccctgcataggactttctttcctgacaatacttgttttttatctgccttcc
aatgagggtgaaaaaatttctctttgtacctcagtccttgtatctctaacagtttttcta
cttgtgatagaagaaattataccttcgtcatcaaaggtcatacctcttattggagagtac
ttggtgttcaccatgatatttgtaacattatcaattgttctaacagtttttgccataaac
attcataatcgttcttctgcaacacataatgctatggcaccctgggttcgcaaaatattc
cttcacaaacttcctaaactgttatgtatgagaagtcacgtggatagatacttcactaga
aaggatgaaacgggaaaggtcagaggaccagagtcatctaggaataccttagaggcagcc
ttggattccatccgttatataacacggcatgtcatgaaggaacatgaagttcaagaggtt
gttgaagactggaagtttgtagctcaagtgctcgacagaatgttcttatggacatttctt
cttgtttcagtaattggttcacttttcctatttatacctgtcatacataaatgggccaat
attattgtgcctgtacacattggaaacatgtatggagacaaaaatacataa
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