Xenopus tropicalis (tropical clawed frog): 100379829
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Entry
100379829 CDS
T01011
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100379829 (ccdc174)
03041 Spliceosome [BR:
xtr03041
]
100379829 (ccdc174)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100379829 (ccdc174)
Spliceosome [BR:
xtr03041
]
Complex C
Other components
EJC/TREX
100379829 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Pannexin_like
Motif
Other DBs
NCBI-GeneID:
100379829
NCBI-ProteinID:
NP_001234938
Xenbase:
XB-GENE-5781828
UniProt:
A0A8J0QEN6
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All DBs
Position
4:complement(132518566..132539173)
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AA seq
456 aa
AA seq
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MDRKKKPLEVTAASLVDLKAELFRKQEEFKHEKLSKDAGLSSKPRAGSKKPSIFSKQNSG
VTARAEKDVEERTEEENTLDKSRKKLEEKALLYEKMTKGDFPDEETEELFLVDFAQKIID
KRNEVQALCQKDKKDGGEDVDGASDLPIPAAQDPSEEWVDYVDSLGRSRRCMKKDLPHLL
KMDRELKGKSSAAEEKTLLSDDMRREIQRQKWEQEEEEALNRPTGPIHYEDIRENEARQL
GVGYFGFARDQTDRQKQMETLTMLRDQTEDQRLKRERLKAKRKSMLQARLSKLKQRKLKN
LKGEGAEGETVPEEEEDFIGPELPEPEEPVGPEKKLEVVVQERRDTKPGVPHVREWDRGK
EFTFGHWSKPRPDPRDERDPEFAPPSFYAAKQKTKSAGRHSQPWNQPGPSHGKLNFGFKQ
NPCPEQQPQQPPGLGRDTEQEAKSLDDMISYYRKVS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggacaggaagaagaagccgctagaagtgactgcagcctcgctggtagatctgaaggct
gaactttttagaaagcaagaggaattcaagcatgagaagctttctaaagatgctggttta
tcatcaaagccaagagcgggcagcaagaaacccagcatatttagtaagcagaattccgga
gtcacagcacgagcagaaaaagatgtggaagagaggactgaagaggaaaacaccttggat
aaatccaggaagaaactagaggagaaagctctcttatatgaaaagatgacaaaaggagac
tttccagatgaggagacagaggagctgttcctggtggattttgctcaaaaaatcattgat
aaaagaaatgaagtgcaggctttatgtcagaaggacaagaaagatggtggggaggatgtg
gatggggcctctgatctgccaatcccagctgcacaggatcccagtgaggaatgggtagat
tatgtggattcactgggcagatcaagacgctgtatgaagaaagacctaccccatcttctg
aaaatggacagagagctgaaaggaaagagctcagctgcggaggagaagacccttctttct
gatgacatgagacgagagatacagcggcaaaagtgggagcaggaggaagaggaggcctta
aatagaccaacaggacccattcactatgaagatattcgagaaaatgaggccaggcaatta
ggtgttgggtatttcggctttgcccgcgatcaaactgatcgtcagaaacagatggagacc
ctcactatgctgcgagatcagacagaggatcagaggctgaaacgcgagcggttgaaagca
aagcgcaagtccatgctgcaagcacgactctccaaactgaagcagagaaagctgaagaac
ctgaaaggggagggggcagaaggtgaaactgtaccagaggaagaggaagattttattgga
ccagaacttccagagccagaagaacctgttgggcctgagaaaaagctggaggttgttgtc
caggagcggagagacacgaaacctggagttccccatgtccgtgagtgggacagaggcaaa
gagttcacattcggacactggtccaaaccaaggccagaccctagagacgagagagaccct
gaatttgcacctccgtcgttctacgctgcaaagcagaagacaaaatccgcgggacgtcat
tcacagccttggaaccagcccggcccttcccatgggaaactgaactttggcttcaagcag
aatccatgccctgagcagcagccgcagcagccgcccggcctcggcagggacaccgagcag
gaagcaaagagtttagatgacatgatctcttactataggaaagtgtcgtga
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integrated database retrieval system
