Xenopus tropicalis (tropical clawed frog): 100379840
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Entry
100379840 CDS
T01011
Symbol
fgd6
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 6 isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100379840 (fgd6)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
100379840 (fgd6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
RHG20_PH
PH_11
PH_20
Motif
Other DBs
NCBI-GeneID:
100379840
NCBI-ProteinID:
XP_017947731
Xenbase:
XB-GENE-5824462
UniProt:
A0A803JQC5
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Position
3:56739168..56791335
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AA seq
1352 aa
AA seq
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MSAAEIKKPPVAPKPKNVLGQKPSPPPVAPKPDVNLSSTVQAPKKSKPAIAPKPKVVKES
SVQEDGPEWTEKSHVKSLNACKGRSSEGVKCKKEITNNEGSTYIISTCSSTCDCTHKPLN
GEYLSKTQKVIDRIENLENKKMCGQPVPCTRPRRKPCNQPSKNSKTNQVLLKSEVEISKD
NISHNAFPNGHAYQQNNCDYICKSASCVLSRDTSKVNQCGSSAPSSEIWPNHMAGHNKSE
ADSSSSPVQGVLPFCPDSNFMKNKYSNGDFLADESSTTENNKTSLVRAQPPQKVLPVPKP
RKVRTPCLVRQDCIESPSEFTEDSVSLSINSAGLFECRLKDTEQPRTPKDLPNKCKEIIP
QEPVSENLIATKSDKCSKIENGTSAENSDFLISKSNKETRLPLYTEESNFVRCSSLSMSL
PKQLKLIYEKQLPVKKCSDDVSEKTSTNDLPENSPRIAPKKPQRHSLPASGLLKKAASEE
RLNQSCDKLLSEVNDFVTEQDASLCSVSKHASEKPAWKLPHPILPFLGSPESLKVSSSCD
TDVNQVTKPRAKSLSSVDMEKIERRKTESPKKGPLRKLLNMKLSVCVIKSDFQKFLCRGS
QSPDSTINNEHCSTESSTFLDFSNKSRPTKAHSADSCSPSCQKKRKRHRSEGNVVKNHTS
LSLEEEVTLRQMPQIISSNHFSSDVLPDYENVRHYEEIPEYENLPYALVLDKSECDPAIY
EVEDPNQPTIYSLHKNAYQSEPLPGYADDELCIVHSDEEEIINSSDEEDFSSDSSRVDLD
HPEYKQKSRAAQKTKTYHIAKEIMSSEKVFVDALKLLHIDFRCAVAQAPRQFGKPVIEEK
ILNQILYYLPQLYELNRDVLRELEERMSQWTEQQKIADIFVKKGPYLKMYSTYIREFDRN
ITLLDDQCKKNPGFAAVVRYFEMSPRCANLALKHYLLKPVQRIPQYRLLLTDYLKNLSED
SSDYNDTQAALSVVIEVANHANDILKQGDNFQKLIQIQYSLNGHHEIVQPGRVFLKEGTL
MKLSRKVMQPRMFYLFNDALLYTTPVQSGMYKLNNMLSLAGMKVRKPTQEAYQNELNIES
VERSFILSASSASERDDWLEAISLAIEEYAKKKITFNPTKSLEEADPGEKEDCTLGSTAP
IWIPDGRVTMCMICTSEFTLTWRRHHCRACGKIICQACSTNKHSLEYLKNHLARVCDRCF
QVLQKQESLSTPKIGSPANHKSPSHALSTVLHSIPSGRKQKKIPAALKVSASTEDSSMSG
YLQRSKASKKQWKQLWFVIKNKVLYTYAASEDIAALESQPLLGFTVKEVKDDISESTVIH
LLHKNTLFYIFKADDAHTTQRWIEAFLEGTVL
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgctgaaattaagaagcctcctgttgcccctaaacctaaaaatgtattggga
cagaagcctagtccaccaccagttgcgccaaagccagatgtaaatctgtctagcaccgta
caagctcctaagaaatcaaaaccagcaatagcaccaaagcccaaggttgttaaagaatcc
tctgtgcaagaagacgggcccgagtggacagaaaaatcacatgttaaaagcctaaatgca
tgtaagggaaggagttcagaaggtgtgaaatgcaaaaaggaaataacaaataatgaaggt
tctacatatataatttccacctgttcgtccacttgcgattgcactcataagcctctgaac
ggggaatatttgtctaaaacacaaaaagtaattgatagaattgaaaatctggaaaataaa
aaaatgtgtgggcaaccagttccatgtacaagaccaaggagaaaaccatgcaaccaacca
tcaaaaaattcaaaaacaaatcaagttctacttaagagtgaggtggaaatcagtaaagat
aatatatctcacaatgcctttccaaacggacatgcatatcaacaaaacaactgtgattat
atttgtaagagtgccagttgcgttctcagtagagatacttctaaggtcaatcaatgtgga
agctctgctcctagctctgagatatggccaaatcatatggctggtcataacaaatcagaa
gctgatagttcctccagtcctgttcaaggtgttttacctttttgtcctgattcaaacttc
atgaaaaataaatacagtaatggtgattttcttgctgatgaatcttcaactacagaaaat
aataaaacatccctagtaagagcacaacctccacaaaaagtacttcctgttcctaaacca
aggaaggtacggacaccatgtttagtacggcaggattgtattgagagcccctcagaattt
acagaagactctgtttccctgtctataaattcagcaggactttttgaatgtagattaaaa
gacactgaacaacccagaacacccaaggatcttcctaacaaatgcaaagaaattattcct
caagaaccagtgagtgaaaatcttattgcaactaaatcagacaaatgcagtaaaattgaa
aatggtacttctgctgagaattcagattttttaatatcaaaatcaaataaagagacaagg
ctaccattatatacagaagaaagtaactttgtacggtgtagttctctatcaatgagtcta
cccaaacagctaaagttgatttacgaaaagcagctacctgtaaaaaagtgctctgatgat
gttagtgaaaaaacaagtactaatgacctaccagaaaattcaccaaggatagctccaaaa
aagccacaaaggcatagcttacctgcatctggtctgctaaaaaaagctgcttctgaagaa
agacttaatcagtcttgtgataagttgctttcagaagtcaatgactttgtaacagaacaa
gatgcatcattatgtagtgtttcaaagcatgcctctgaaaaaccagcatggaagctgcct
caccccattttaccatttttaggaagtccagaatcattaaaagtttcttcaagttgtgac
actgacgttaatcaagtcaccaagcctagggctaaatctttgtcttctgttgatatggaa
aaaatagaaagaaggaaaacagaaagccctaaaaaaggcccattaaggaagctgctgaac
atgaagttgtcagtttgtgtaataaagagcgactttcagaaatttctttgtagaggtagc
cagtccccagacagtactataaataatgaacattgttctacagaaagctcaacattcctt
gacttcagtaacaagtcaagaccaacaaaggcacattctgctgattcttgcagtccttca
tgccagaaaaaaaggaagagacatagaagcgagggcaatgttgtaaaaaaccatacttct
ttgtctctagaagaagaggttactttaagacagatgccacaaataatatcttcaaatcat
ttttcaagtgatgtccttccagattatgaaaatgtccgccactatgaagaaatcccagaa
tatgaaaatttaccatatgctctggtattggataaaagtgaatgtgatccagctatttat
gaagtagaagacccaaaccaacccacaatttattcattgcacaagaatgcatatcaaagt
gagccgctaccaggctatgctgatgatgaactctgcattgttcattctgatgaagaagag
attattaacagctcagatgaagaggacttcagctcagattccagcagagtagatcttgac
catccagagtacaaacagaagagcagagccgcacagaagactaaaacttatcatattgcc
aaggaaatcatgagctcagagaaagtgtttgttgatgcccttaagctgttgcatattgat
ttccgttgtgctgtggctcaggcccccaggcaatttgggaagccggttattgaggagaag
atactgaatcagatcctgtattatctccctcagctgtatgagctcaacagggatgtgcta
agagagcttgaggaacggatgtcccagtggactgagcaacagaaaattgctgatatcttt
gtgaaaaagggcccttaccttaaaatgtactcaacatacattcgagaatttgataggaat
ataactttgctggatgatcagtgcaaaaagaacccagggtttgcagcagttgtaagatat
tttgagatgagtcctcgctgtgctaacctagctttgaaacattacttacttaagccagta
caaaggattcctcaatacaggttactcttaacagattatcttaaaaacctttcagaagac
tcatcggactataatgatacacaagctgccctttcagttgtcatagaagtggctaaccat
gcaaatgacatcttaaagcaaggggacaacttccagaagctcatacagatccagtacagc
ctaaatggtcatcatgagattgtgcagccaggaagggtctttctaaaggagggaaccttg
atgaaactctccaggaaggttatgcaacctcgcatgttttacctgttcaatgatgctttg
ttatacaccacacctgtgcagtcaggaatgtacaaactgaacaatatgctctcattggct
gggatgaaggttaggaaaccaacgcaagaggcttatcagaatgagcttaatatagagagt
gtggaaaggtccttcattctatctgccagttctgcatctgagagagatgattggcttgaa
gccatttctctggctattgaagaatatgctaagaagaaaataaccttcaatccaactaag
agtctggaagaggctgaccctggggaaaaggaagattgcactcttgggtcgacagcacca
atctggatccctgatggtagagttacaatgtgtatgatttgcacaagtgaatttacattg
acatggagaagacatcactgcagggcatgtggaaagatcatctgtcaggcctgttcaaca
aacaagcatagcttggaatatctaaaaaaccatttagctcgggtgtgtgaccgctgcttc
caagtgctgcaaaagcaagaaagtctgtctactcctaagattgggtcccctgcaaaccac
aaatcaccatcccacgccttgtctacagttctccacagcattccatctggcagaaaacag
aagaagattccagcagctttaaaagtatcagccagcacagaagattcttccatgagtggt
tacctacagaggtccaaagccagcaaaaagcaatggaaacaactgtggtttgtgataaag
aacaaagttctgtatacgtatgctgcaagtgaggacatagcggcactggagagccaaccc
ttgctaggatttacagtcaaggaagtaaaggatgacattagtgaatccacagtcattcat
ttactgcacaaaaacactttattttacatctttaaagctgatgatgcccacacaacacaa
aggtggatagaagcatttctggagggaacagtgttataa
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