Xenopus tropicalis (tropical clawed frog): 100379911
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Entry
100379911 CDS
T01011
Symbol
nup155
Name
(RefSeq) nuclear pore complex protein Nup155
KO
K14312
nuclear pore complex protein Nup155
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100379911 (nup155)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
100379911 (nup155)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100379911 (nup155)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
100379911
NCBI-ProteinID:
XP_002938230
Xenbase:
XB-GENE-973827
UniProt:
F6UHT0
LinkDB
All DBs
Position
1:197754592..197786571
Genome browser
AA seq
1388 aa
AA seq
DB search
MPSVTPGAPAASAAMQEALEGAGRIIDRLLQEDRAYPDLSELLNVPVHTCPTISGVSEMD
YPLQSPGLLTIPSLPEISAIRRVPLPPELVEQFGHMQCNCMMGVFPEISRAWLTIDSDIF
MWNYEDGGDLAYYDGLSETILSVGLVKPKAGIFQPHIRFLLVLATPVDIVILGLSFANLQ
PGNLNDSISGGMQLLPDPLYSLPTDNTYLLSITSTDNGRIFLSGKDGCLYEVEYQAEAGW
FSQRCRKINHSKSSLSFLVPSVLQFAFSEDDPIVQIAIDNSRNILYTRSEKGVIQVYDLG
VDGHGMSRVASVSQNSLVSAAGNIARTIDRNVFKPIIHISVIEMSESVNCHLLAVTHAGV
RLYFSTVPFKQPTARPSMLALVHVRLPPGFSASSNVEKPSKVHRALYNSGVLLMAASENE
DNDILWCINRDSFPFQRPMMETQVTTQVDGHSWALSAVDEQKADKIVTPLNKDLIPLTDS
PVIIQQHMIPPKRFVLLSAQGSHIFYKLRPVDQLRHLLVSNSGGDGEEIERFFKLHQENQ
ACATCLILACSTAASDREVSAWAARAFFRYGGEAQLRVQSALHQPGNVGPIFGSPLPVAS
PMPVGSPMPNPSFLGTPTQGACPPNVSTPAYGVATPAPQPAAVPGMMGTEIAFSGKHNGI
CIYFCRIIGNIWDGSVAVENTFKSGNREVTAIDSSVTPQLLESVLQELKGLLEFLDRYSQ
FTAGSLGNPSFGTPANRQQRLVGLGRPDSGSSQQAQQELQRKYHTEAQLAEQLSLQGIHQ
LVRKMCQALALWKLLCEHQFSLIVSDLQKELQEQLKITTFKDLVIRDKELAGALTASLIN
CYIQDNASVDGVSYRLQEVCPLLYSTDDAVCSKANELLQRSRHVPNKLEKERMLRESLKE
YQKISQQVDLPNVCAQYRQVRFYEGVVELCLTAAEKKDPQGLGLHFHKNGEPEEDVAGLQ
AFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGIHFEQM
LKLAQRSTDELFNIALFNWLIQADLTDKLLELNSPFLEPHLVRMAKLDQNKVRYMDLLWR
YYEKNRNFSNAARVVAKLADMPSTEISLKQRLEYISRAILSAKSSTTMSTLAADGEFLHE
LEEKLEVARIQLQIQETLSRQYSHHSAVGDAVSQLDSQLMDITKLFGQYADPFRLSECKL
AIIHCAGHSDPILVQTLWQEIIDKELSDSLGNSSVDRMQSLHLKMTSLGKIYASTPRYFP
LEFLVKYLEQQVCNFSWDAGFVTYTMQEINVPVPKLLEVYDHLFKARDPWWSRMKKPLHL
LESIYLLLSGYVQEPSKVPSYERRRFTTLCLDAISCYLVELQSMDPAPALLNTVSNFKSL
QAKLERLS
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtgtaacacctggggccccggcagcctctgccgccatgcaggaggctttggaa
ggagcgggaaggatcatagacaggctgctgcaggaggaccgagcctacccggacctgtcc
gagctgctcaacgtgcccgtgcatacttgtcctacaatatctggtgtatctgaaatggac
tatcctctgcaaagccctggcctgttgacaattcccagccttcctgagatcagcgctatc
cgccgcgttcctcttcctccagaactggtagagcaatttggacatatgcagtgtaactgt
atgatgggagtgttcccggaaatcagcagggcatggctgaccatcgacagtgacatattc
atgtggaactatgaggatggcggtgaccttgcctactatgacgggctcagtgaaaccatc
ctttctgtggggctagtaaaacctaaggcaggaatttttcagcctcacatacgctttctg
cttgttcttgctactcctgttgatattgtgatcctgggactaagttttgccaatttacag
ccaggtaatcttaatgacagcatttctggtggaatgcagctactcccagacccgctatat
tccttgccgacagacaacacctatcttttatccataacatcaactgacaatgggcgcata
ttcctctctggaaaggatggttgtctgtatgaagttgaatatcaagctgaagcgggctgg
tttagccagagatgccggaaaatcaaccactccaaaagttccctttccttcctcgtgcct
tccgttctgcagtttgctttctcagaggatgatcccattgtacaaattgcaattgacaac
tcaaggaacatcttgtatacccgctctgagaaaggcgtcatacaggtgtatgacttgggt
gttgatggtcatggtatgagcagagtggcatcagtatctcagaactctcttgtctccgct
gctggaaacattgccaggacaatagatcgcaatgttttcaaacccatcattcacatctca
gtcatcgagatgtcagagtctgtgaattgtcatttgctggctgtcacgcatgcaggtgtt
aggctatactttagcactgtgccatttaaacagccaacagcccggccctccatgttagct
ttggtgcatgttcgcctacccccagggttttctgcttcctccaacgtggaaaaaccatca
aaggtgcacagagcactatacaacagtggtgtattgctgatggctgcatctgaaaatgaa
gacaatgatatattgtggtgcatcaatcgtgattcttttccatttcaaagaccaatgatg
gaaacacaggtgactacccaggtggatgggcattcctgggctctgtctgcagtagatgaa
cagaaagctgataaaattgtaacccctttaaacaaagatctcatccctctcacggactct
ccggttattattcagcaacatatgatccctcccaaacgctttgtgcttctgtctgcacag
ggaagccatattttctacaaacttagaccagtggatcaactacgacaccttcttgttagc
aattcaggaggagatggggaagaaatagagcgttttttcaagttacatcaggagaaccag
gcttgtgcaacctgcttgattcttgcatgttccactgctgcatctgacagagaagtctct
gcttgggctgctcgggcatttttcaggtacggtggggaggctcagttgcgtgtacagtca
gcactacaccaacccggtaatgttgggcctatcttcggttctcctctgccagtagcttca
cctatgcctgtaggcagtccgatgccaaatcctagcttcctggggaccccaacacaagga
gcctgccctcctaacgtttctaccccagcatatggagttgcaacccctgcaccgcagcct
gctgctgtaccgggcatgatgggaacagaaattgcattttcaggaaagcacaatggtatt
tgcatctacttctgccgcattatcggtaatatttgggatggaagcgtagctgtggaaaac
accttcaagagcgggaacagagaagtcacagcgattgacagcagtgttacaccacagctt
ctggagtctgttcttcaagagctcaaagggttactggagtttcttgatcgatactcccag
tttactgctggatctctaggtaaccccagctttggtacacctgcaaatcgtcagcagcga
cttgtgggcctgggccggcctgactctggcagttcacagcaagcccaacaagaactccaa
agaaaataccacactgaagctcagcttgcagaacagttatctctccaggggatccatcag
ctggttaggaaaatgtgccaagctcttgctttgtggaagctactgtgtgaacatcagttt
agcctcattgtttcagatctacaaaaggaactccaggagcagctgaagataaccactttt
aaagatcttgtgatcagagacaaagagctggcgggggctcttaccgcatctttgatcaat
tgctacatccaagacaacgcatcagtggatggagttagttaccgacttcaagaagtgtgt
cctcttctgtacagcactgacgatgcagtgtgctcaaaggcaaatgaacttttgcaaaga
tcccgccatgttccaaacaaactggaaaaggagagaatgctacgagagtcattaaaagag
tatcaaaaaataagtcaacaggttgaccttcctaatgtgtgtgctcagtacaggcaagta
cgcttctatgagggagtggtggagctctgcctaactgctgctgagaagaaagatcctcag
gggctaggccttcatttccacaagaacggagaacctgaggaggatgtggctggcctgcag
gcttttcaggagaggttaaatagctacaaatgtatcactgatacacttcaagagctggtg
aaccaaagtaaagctgcaccccaatcacccagtgttcccaaaaaaccaggccctcctgtc
ctgtcgtcggaccccaacatgctcagcaacgaagaggcaggaatacattttgagcaaatg
ctgaagttggcacagcgttctacagatgagctcttcaacatagcacttttcaactggctt
atacaagcggatctcactgacaaactgctggagttgaattctccgtttctggagccacat
ttggtgcgtatggcgaagctggatcagaacaaagtgcgatacatggatttgctgtggcga
tactatgagaagaacagaaatttcagcaatgctgctcgtgtcgtggccaaacttgcagat
atgcccagcacagagatctcattaaagcaacgacttgaatacatctccagagccattctc
agtgccaagagctccactacaatgtccacccttgctgccgacggcgagttcttgcacgag
ctggaagaaaagttagaggtagcaagaattcagctgcaaatacaagagaccctaagcaga
caatattcccaccattcggctgtgggggatgcagtgtcgcagcttgattctcagctaatg
gacattacaaagctgtttggacaatatgctgatccatttaggctttcagaatgcaaacta
gcaattatacactgtgctggacattcagatcctatattggtgcagacactctggcaagaa
atcattgataaagaattgagcgacagcctgggaaatagctcggtagatcgaatgcagtcc
cttcatctaaaaatgacttctcttggaaaaatctatgccagtacccctcgctattttcct
ttggaatttttggtgaaatacctggaacaacaggtgtgtaacttcagctgggacgctggc
tttgtaacctacacaatgcaagagatcaatgtgcctgttcccaagttacttgaagtatat
gatcacttgtttaaagcaagggatccctggtggagtaggatgaagaagcccctgcacttg
ctagaaagcatttatcttttgctttctgggtatgtacaggagccaagcaaagtgccttcc
tatgaaaggcgccggtttaccacactctgcctggatgcaatatcctgctacctagtggaa
ctgcagtcgatggatccggctccggcgttgctgaatactgtatctaacttcaaatctttg
caagctaaattagagcggctgagctag
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