Xenopus tropicalis (tropical clawed frog): 100379913
Help
Entry
100379913 CDS
T01011
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog isoform X3
KO
K14791
periodic tryptophan protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
100379913 (pwp1)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
90S particles
Other 90S particles
100379913 (pwp1)
Pre-60S particles
Other pre-60S particles
100379913 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
EIF3I
WD40_WDHD1_1st
WD40_RFWD3
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_DCAF12
DUF4354
Beta-prop_SPT8
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
100379913
NCBI-ProteinID:
XP_002938737
Xenbase:
XB-GENE-978886
UniProt:
A0A8J0QV75
LinkDB
All DBs
Position
3:complement(15179293..15203133)
Genome browser
AA seq
502 aa
AA seq
DB search
MSCQITCLSWVSRGVAKESPDKVQLSEAELTRLISEAKEQLEGELEGDEDEAEQNEGDNM
ESNEEAEANEAPQDGEEQEESISKLNDDELAEYDLDNYDEEGRTDVINLGDSLAGLSVYS
SNEEDAYVTLKDTEQYEKEDYVIKPTDNLLVCGRAEKDHCNLEIHVYNQEEDSFYVHHDI
LLPAYPLCTEWLNFDPSPEESTGNYVAVGNMTPVIDVWDLDLVDCLEPVFSLGCKQTKKK
KKKGKKGASSEGTQEGHSDAVLDLSWNKQIRNVLASASADNTVLLWDMSIGKPAASLTMH
TDKVQTLHFHPFEPQTLISGSFDKSAILYDCRSPQENHRTWRFSGQVERVVWNHFSPRNF
LASTDDGFVYCLDARSDKPLFTIKAHDGEVSGLALSSQIKGCLVTSSEDKYVKIWDIMLD
KPSLVHSRNMKMGVLFCAACCPDLPFLYAFGGQKDGLRVWDISTIAAVKEAFGSRERLVL
STSLDPASGKSEASGTADTMES
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtcagataacctgcctgtcctgggtatcgcggggagtcgctaaagagagcccc
gacaaggttcagctgagtgaagcagaactgactagacttatttctgaagcaaaggagcaa
ttagaaggagaacttgagggtgacgaagatgaagctgagcaaaatgaaggcgacaacatg
gaaagcaatgaagaggcagaagcaaacgaggctccgcaagatggcgaagaacaggaggaa
agtatttcaaagctgaatgatgatgagttggcagaatatgatctggacaactacgatgaa
gaaggaaggacagatgttataaaccttggagacagccttgctgggctctctgtgtacagc
agtaatgaggaagatgcttatgtcacactgaaagatacagaacaatatgagaaagaagat
tatgtaattaaacccacagataacctgctggtttgtggacgggcagaaaaagatcactgc
aatctggagattcatgtctataaccaggaagaagattctttctatgtccaccacgatata
cttttgccagcgtacccactctgcactgaatggctgaatttcgatcccagcccagaagaa
tctactggtaactatgttgcagttgggaacatgacccctgttattgatgtttgggacctt
gatctggtcgattgcctagagccggtcttctccctggggtgcaaacaaacgaaaaagaag
aaaaagaaaggcaagaagggggcttcatctgaaggaacacaggaaggacattctgatgca
gttctggacctttcatggaacaaacaaatcaggaatgtgctggccagcgcttcagctgac
aatacagttctactctgggacatgtctatagggaaacctgctgccagcctcaccatgcac
actgataaggtgcagacactgcatttccaccccttcgaaccacagacactcatttctgga
tcttttgacaaatcagccatattatatgactgcaggagcccacaagaaaaccatagaacg
tggcggttcagtgggcaggtggaaagagttgtttggaatcacttctctcccaggaacttc
ttggcgagcacggatgatggctttgtgtattgtttggatgccagatctgataaacccctg
ttcacaattaaggcacatgacggagaggtgtcaggacttgccttaagtagccaaataaag
ggatgtcttgtgacttcctcggaagataaatatgtgaagatttgggacattatgttggac
aagccaagtctagttcactccagaaacatgaaaatgggtgtcttgttttgtgctgcatgc
tgcccggatttaccgtttctttatgcatttggtggacaaaaagatggactgcgagtctgg
gacatctccactatcgctgctgtgaaagaggctttcggaagcagagagagactcgtgctc
tccacatcactggatccagcatctggaaagagtgaggccagcggcacagcagacacaatg
gaatcctaa
DBGET
integrated database retrieval system
