KEGG   Xenopus tropicalis (tropical clawed frog): 100380033
Entry
100380033         CDS       T01011                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100380033 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100380033 (xrcc1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100380033 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 100380033
NCBI-ProteinID: XP_031761618
Xenbase: XB-GENE-968809
UniProt: A0A6I8SML0
LinkDB
Position
7:118932119..118947370
AA seq 651 aa
MPEIKLKHVVSCSSADTTHTAENLLKADTYRKWKAARPGEKQISVILQFEKEEQVHSIDI
GNEGSAFVEVLVGHSTSISEQEYEVLLGMSSFMSPSESKNESNLNRLRMFGPDKLVKGAA
EKKWDRVKIVCTQPYTKNLAYGISFIRLNSPPEDGSPTAPSPKVTKLGQFMVKEEENSSP
SMRPGSLFFSRTSKPQVTPPKTPPATQSYASATLQGTGEASSSTEKQTVKTPPSNNIPKE
PSSGKRKFEFSKEPSSHSAVKKHEVNKSPSSAKESTSQPAPKKPKVETQTVPPTKKPSPS
EKPAQKKSSPAPQQMELGRILQGTVFVLSGFQNPFRSDLRDKALEMGAKYRPDWTPDSTH
LICAFANTPKFSQVKSAGGIIVRKEWILDCYKKKQRLPYKQYLLGSADSSSDEEDDSEED
ERPKAPHKPTPDPSRTNHKRPSPSPSKVKVKKTPIKSEDEETEDENPRIVSSKANNTPKQ
EDEYNASTDEEATGKRQPHLEDSGEDTEEELRRFHEEKQGKKAAAIKAEPEDPYAGSTDE
NTDVEEEPEPDLPIPELPDLFLGKKFFLYGEFPAAERRMLHRYITAFNGELEEYMNEKVQ
FVITAQEWDDRFEDALNENANVSFVRPRWIYNCNERQKCIPHQPYVVVPQE
NT seq 1956 nt   +upstreamnt  +downstreamnt
atgcctgagatcaaactgaagcacgtggtttcctgtagcagcgccgatacaacacacaca
gcagagaacctgctgaaagccgacacataccgcaaatggaaagccgcccgccctggggag
aagcagatctccgtcattttgcagtttgaaaaggaggagcaggtccacagcattgatatt
ggcaatgaaggttctgcgtttgtggaagtgctggtcggacactccacttcaatcagcgag
caggaatatgaggtcctcctgggaatgtcatcgttcatgtctcctagcgagagcaagaat
gaaagcaacctgaatcggctgcgaatgttcggaccagacaagctcgtgaaaggagcagct
gaaaagaaatgggatcgggtgaagattgtgtgcacccaaccctacactaagaaccttgct
tatggtatttcattcatacgtctgaactcccctccagaggatggctcgcccaccgctccc
tcaccgaaagtgaccaaacttgggcagtttatggtaaaggaagaagagaactcatctcct
tctatgcgtcccgggagtctgtttttcagccgcaccagcaagccgcaggttactcctccg
aaaactccaccagccacacaaagctatgcgtctgcgacattacagggcacaggagaggcc
agctccagcactgaaaaacagactgttaaaaccccaccaagtaataacatcccaaaggaa
ccgtcatctggtaaacggaagtttgagttcagtaaagaaccctcaagccactcggcagtc
aagaaacacgaagtcaataagtccccatcttccgccaaagagagcacatcacagccagca
cccaaaaagccaaaagttgaaacacagactgtccctcctacaaagaagccttctccatcg
gagaagcctgcccagaaaaagtcctcaccggctcctcagcaaatggaactgggtcgcatt
ctgcagggcacagtgtttgtgctaagtggctttcagaatcccttccgatctgacctccgt
gataaagcattagagatgggagccaagtacaggccagattggaccccagacagtactcat
ctcatatgtgcttttgcaaatacccctaaattcagccaggtgaaatcagcggggggtatc
atcgtgcgaaaggagtggatcctggactgctacaagaaaaagcaacggctgccgtacaag
cagtacctgttgggttcagctgattccagtagtgatgaagaggatgatagtgaggaagat
gaacgccccaaagctccacataagccgactccagatcccagccgcacaaaccacaaaagg
ccttcgccgagtccatccaaggtcaaagtcaagaaaactccaataaaaagtgaagacgaa
gaaacagaggatgaaaatcccagaatagtttcctcaaaagcaaacaacacacctaaacag
gaggatgaatacaacgcaagcactgatgaggaagccacaggtaagaggcaaccccatctg
gaggattctggggaagatacagaagaagagctaaggaggttccatgaagagaaacaaggc
aagaaggcagctgccattaaggctgaacccgaggatccatacgccggctctactgatgag
aacaccgacgtggaggaggaaccagagccggaccttcccatccccgaactgcccgatctg
ttcctggggaagaagttctttctctatggcgagttccctgctgctgagcgccggatgctg
cacagatacatcactgctttcaatggagagctggaggagtacatgaatgaaaaagtccag
tttgtgatcaccgcccaggaatgggatgaccgttttgaagatgctcttaatgaaaatgca
aacgtgtcttttgtccggcctcgttggatctacaactgcaacgagcgacagaagtgcatt
ccccaccagccgtatgttgtggtaccgcaggagtaa

DBGET integrated database retrieval system