Entry
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
KO
K10803 DNA-repair protein XRCC1
Organism
xtr Xenopus tropicalis (tropical clawed frog)
Pathway
Brite
KEGG Orthology (KO) [BR:xtr00001 ]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100380033 (xrcc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:xtr03400 ]
100380033 (xrcc1)
DNA repair and recombination proteins [BR:xtr03400 ]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
100380033 (xrcc1)
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
7:118932119..118947370
Genome browser
AA seq
651 aa AA seq DB search
MPEIKLKHVVSCSSADTTHTAENLLKADTYRKWKAARPGEKQISVILQFEKEEQVHSIDI
GNEGSAFVEVLVGHSTSISEQEYEVLLGMSSFMSPSESKNESNLNRLRMFGPDKLVKGAA
EKKWDRVKIVCTQPYTKNLAYGISFIRLNSPPEDGSPTAPSPKVTKLGQFMVKEEENSSP
SMRPGSLFFSRTSKPQVTPPKTPPATQSYASATLQGTGEASSSTEKQTVKTPPSNNIPKE
PSSGKRKFEFSKEPSSHSAVKKHEVNKSPSSAKESTSQPAPKKPKVETQTVPPTKKPSPS
EKPAQKKSSPAPQQMELGRILQGTVFVLSGFQNPFRSDLRDKALEMGAKYRPDWTPDSTH
LICAFANTPKFSQVKSAGGIIVRKEWILDCYKKKQRLPYKQYLLGSADSSSDEEDDSEED
ERPKAPHKPTPDPSRTNHKRPSPSPSKVKVKKTPIKSEDEETEDENPRIVSSKANNTPKQ
EDEYNASTDEEATGKRQPHLEDSGEDTEEELRRFHEEKQGKKAAAIKAEPEDPYAGSTDE
NTDVEEEPEPDLPIPELPDLFLGKKFFLYGEFPAAERRMLHRYITAFNGELEEYMNEKVQ
FVITAQEWDDRFEDALNENANVSFVRPRWIYNCNERQKCIPHQPYVVVPQE
NT seq
1956 nt NT seq +upstream nt +downstream nt
atgcctgagatcaaactgaagcacgtggtttcctgtagcagcgccgatacaacacacaca
gcagagaacctgctgaaagccgacacataccgcaaatggaaagccgcccgccctggggag
aagcagatctccgtcattttgcagtttgaaaaggaggagcaggtccacagcattgatatt
ggcaatgaaggttctgcgtttgtggaagtgctggtcggacactccacttcaatcagcgag
caggaatatgaggtcctcctgggaatgtcatcgttcatgtctcctagcgagagcaagaat
gaaagcaacctgaatcggctgcgaatgttcggaccagacaagctcgtgaaaggagcagct
gaaaagaaatgggatcgggtgaagattgtgtgcacccaaccctacactaagaaccttgct
tatggtatttcattcatacgtctgaactcccctccagaggatggctcgcccaccgctccc
tcaccgaaagtgaccaaacttgggcagtttatggtaaaggaagaagagaactcatctcct
tctatgcgtcccgggagtctgtttttcagccgcaccagcaagccgcaggttactcctccg
aaaactccaccagccacacaaagctatgcgtctgcgacattacagggcacaggagaggcc
agctccagcactgaaaaacagactgttaaaaccccaccaagtaataacatcccaaaggaa
ccgtcatctggtaaacggaagtttgagttcagtaaagaaccctcaagccactcggcagtc
aagaaacacgaagtcaataagtccccatcttccgccaaagagagcacatcacagccagca
cccaaaaagccaaaagttgaaacacagactgtccctcctacaaagaagccttctccatcg
gagaagcctgcccagaaaaagtcctcaccggctcctcagcaaatggaactgggtcgcatt
ctgcagggcacagtgtttgtgctaagtggctttcagaatcccttccgatctgacctccgt
gataaagcattagagatgggagccaagtacaggccagattggaccccagacagtactcat
ctcatatgtgcttttgcaaatacccctaaattcagccaggtgaaatcagcggggggtatc
atcgtgcgaaaggagtggatcctggactgctacaagaaaaagcaacggctgccgtacaag
cagtacctgttgggttcagctgattccagtagtgatgaagaggatgatagtgaggaagat
gaacgccccaaagctccacataagccgactccagatcccagccgcacaaaccacaaaagg
ccttcgccgagtccatccaaggtcaaagtcaagaaaactccaataaaaagtgaagacgaa
gaaacagaggatgaaaatcccagaatagtttcctcaaaagcaaacaacacacctaaacag
gaggatgaatacaacgcaagcactgatgaggaagccacaggtaagaggcaaccccatctg
gaggattctggggaagatacagaagaagagctaaggaggttccatgaagagaaacaaggc
aagaaggcagctgccattaaggctgaacccgaggatccatacgccggctctactgatgag
aacaccgacgtggaggaggaaccagagccggaccttcccatccccgaactgcccgatctg
ttcctggggaagaagttctttctctatggcgagttccctgctgctgagcgccggatgctg
cacagatacatcactgctttcaatggagagctggaggagtacatgaatgaaaaagtccag
tttgtgatcaccgcccaggaatgggatgaccgttttgaagatgctcttaatgaaaatgca
aacgtgtcttttgtccggcctcgttggatctacaactgcaacgagcgacagaagtgcatt
ccccaccagccgtatgttgtggtaccgcaggagtaa