Xenopus tropicalis (tropical clawed frog): 100380049
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Entry
100380049 CDS
T01011
Symbol
rpusd3
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase RPUSD3 isoform X1
KO
K22537
mitochondrial RNA pseudouridine synthase RPUSD3 [EC:5.4.99.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
xtr03029
]
100380049 (rpusd3)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
100380049 (rpusd3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
100380049
NCBI-ProteinID:
XP_002933094
Xenbase:
XB-GENE-982810
UniProt:
A0A8J0QJP9
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Position
4:complement(138203616..138213487)
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AA seq
368 aa
AA seq
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MALLCRQLGGNRSGLALIDRFYFRASCHFSNVSRVPWYKTHLDVRDKGRKPRSEPQSSRV
SILRDPGVFVVDKMSRERICQLLVENVVYLKGPLVAINKPQGLSITGKEQEVSVSSLLAD
LQQHLGLGSDLHIVKAAPKESSGLVLLSTCHMTTKRLEDYYALCRKAQKPTASYCAVMAG
VPHPAEGEIKAALKLERIEDWQLVVPVTDPSKGRLERREIKRTLTRYKVLDSADGCALVQ
LQPMSVFQAQLLVHSTLMFCRILGDHTYSARVGKVLGENIFVPMDIALPRTQVLEENVLR
RMHFTQQQMHRMPLHLHFQQLMIPGESPAEGDTFLDAPPPPFFQRTLQLLGLYANKQLCS
DRDTYTAK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctgtgccggcagctggggggcaacaggtcggggctggcacttattgatcgc
ttttatttccgggcctcctgtcacttctctaatgtcagcagagtcccctggtataaaacc
caccttgatgtgagggataaggggagaaaacctcgctccgagccgcagtcgagcagagtc
agcatcttgagggatcctggcgtttttgttgtggataaaatgtcaagagagagaatttgc
caactgctggtggaaaatgtggtgtatcttaaaggtccacttgtggctataaataaacct
cagggcttatcaattacagggaaggagcaggaggtgtctgtgtcttcactactagcagat
ctgcagcagcacttgggactcggcagtgaccttcatatagtaaaagcagcaccaaaagag
agttcaggtctggtccttctctctacgtgtcacatgaccacaaagcgacttgaggattat
tatgcgctctgtcgtaaagcgcagaagccaacagcgtcttactgtgcagtgatggcgggg
gttccacacccagcggagggggaaataaaggctgcactgaaactggaacgaattgaagat
tggcaactggttgtaccagtcacagatccatcaaaagggagactggaaaggagagaaata
aagagaaccctgacccgatataaggttctagactctgcagatggctgtgctctagtacag
ctgcaacctatgtctgttttccaagcccagctcttggtgcacagcacactaatgttctgc
cgaattctcggggaccacacatactcggcccgggtggggaaggtcctaggagagaatatt
tttgttccaatggacattgcgcttccccgcacacaggtgctagaagagaatgttttgcgc
cggatgcacttcacacaacagcagatgcatcgcatgcccctccatctacactttcaacaa
cttatgattcccggtgagtctcctgcagagggggacacctttctcgatgcaccaccaccc
cctttcttccaacggactctccaactgttgggactgtatgcaaacaaacagctttgcagt
gacagagacacttatacagccaaataa
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