Xenopus tropicalis (tropical clawed frog): 100380069
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Entry
100380069 CDS
T01011
Symbol
ss18l1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100380069 (ss18l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100380069 (ss18l1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100380069 (ss18l1)
GBAF(ncBAF) complex
100380069 (ss18l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100380069
NCBI-ProteinID:
NP_001182635
Xenbase:
XB-GENE-993774
UniProt:
A0A8J0QG14
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Position
10:4415071..4428124
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AA seq
402 aa
AA seq
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MSVAFASARPRGKGEITQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGGMSQTGPSQTLHSQGNLSDALGSSLPPSSLMQ
GQISNGPNHVSMQQSGQTTLPTTTMSMAVSTHGTAPGYSHTVPSSQNMPMQSQGSIGNYV
SRANMNMPSNPVSMMHQQATGSHYTSAQAGSQHYQGQPSISMMNQSSQGSGMIGQRPLGP
YRPSQQGSSQQYLGQEEYYSEQYGHSQGTSEPMTPQYYTDGHGDYSYQQSTYGEQSYDRT
FEDSSQHYYEGGNAQYSQQQTGYQQGSGQQQAYSQQQYSNQQNYPGQQQGYVPAQGASSQ
YSGYQQGQGQQYTSYRTSQTASTAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcctttgcatcagccagacccagaggcaagggagagatcacccagcaaact
attcagaagatgctggatgaaaaccatcacctgatacagtgtatcatggattatcagagc
aagggcaagactgctgagtgtacacaataccagcaaatcctacacaggaacctggtgtat
ttagccacaatcgccgactccaaccagaacatgcagtctcttctccctgcgcctcccaca
cagaatatgaacctgggacccggagggatgtcccagacggggcccagccagaccctgcac
tctcaagggaacttgagtgacgctctgggatccagcctgccaccctcatcacttatgcag
ggtcagatcagcaatggaccaaaccatgtgtccatgcagcagtctggccaaaccactttg
cccaccactaccatgagtatggctgtgagtacccatggcactgcccctggatatagccac
actgtgccaagctctcagaatatgcccatgcagagccaggggagcattggtaactatgtg
tcacgggcaaacatgaacatgccgagcaacccagtgtccatgatgcaccagcaggccaca
ggctcccattacacctcggcacaggcaggcagccagcattaccagggacagccttccatc
tccatgatgaaccagagcagccaagggagcggcatgattggccagagaccgctcggacct
taccggccttcacaacaaggctcttcccagcagtacctggggcaggaggaatattacagc
gaacagtatggccacagtcaaggcacctcagaacccatgaccccgcagtactacactgat
gggcatggggactactcctaccagcagtcgacgtacggagagcagagctacgaccggacg
ttcgaggattcctctcagcattactacgagggaggaaacgcgcagtacagccagcagcag
acaggataccagcaaggcagtgggcagcagcaggcgtattcacaacagcaatactccaac
cagcagaactaccctgggcagcagcagggatacgttccagcacaaggagcctcttctcag
tattctggctaccagcaaggtcagggccagcagtataccagctaccggacctcccagacg
gcatccactgcccagcaacagaggccttatggctacgagcagggccagtatggaaattac
cagcaataa
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